BLASTX nr result

ID: Coptis24_contig00004770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004770
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281091.1| PREDICTED: uncharacterized protein LOC100255...   593   e-167
emb|CBI29972.3| unnamed protein product [Vitis vinifera]              592   e-167
ref|XP_002531167.1| conserved hypothetical protein [Ricinus comm...   589   e-166
ref|NP_567068.1| ubiquitin thiolesterase [Arabidopsis thaliana] ...   564   e-158
gb|AAM61144.1| unknown [Arabidopsis thaliana]                         562   e-158

>ref|XP_002281091.1| PREDICTED: uncharacterized protein LOC100255516 [Vitis vinifera]
          Length = 425

 Score =  593 bits (1528), Expect = e-167
 Identities = 280/386 (72%), Positives = 330/386 (85%)
 Frame = +2

Query: 74   HSYHLLHQCRGIVKVRLKWVKNRGLDHIIDKETDLKAAVLLKDAIKRTTTGFITSQTISD 253
            H +HL  QCRGIV+VRLKWVKNR LDHIID ETDLKA  LLKDAIKR+++GF+ S ++++
Sbjct: 20   HHHHL--QCRGIVRVRLKWVKNRSLDHIIDTETDLKAVCLLKDAIKRSSSGFLASNSVAN 77

Query: 254  WQKHLGLTIPVLRFLRRYPTLFHEFPHSRYPSLPCFKLTDTALLLDSQEQKIHQAYETNT 433
            WQK LGLT+PVLRF+RRYPTLFHEFPH +YPSLPCF+LTDTAL+L SQE+ IHQ +E +T
Sbjct: 78   WQKLLGLTVPVLRFMRRYPTLFHEFPHPKYPSLPCFRLTDTALMLHSQEESIHQTHEADT 137

Query: 434  VERLCKVLMMMNSKVIPFQSLHPLKWDLGLPDDLIKTLVPKYPDLFRVVKAVNGVSCLGL 613
            VERLCKVLMMM + ++P QSL PLKWDLGLPDD  +TL+PKYPD FRV+KA NGV CL L
Sbjct: 138  VERLCKVLMMMKTSMVPLQSLSPLKWDLGLPDDYHRTLIPKYPDHFRVIKASNGVPCLRL 197

Query: 614  VDWKDEFAVSVLQKRNEMNVEGGNGGYRDFKRGRNVIAFPMSFPRGYGGQKKVRAWMDEF 793
              W++EFAVS LQK +E   E   G YR+FKRG++ +AFPMSFPRGYG QKKV+AWM+EF
Sbjct: 198  GGWREEFAVSALQKSHERG-ELDGGEYREFKRGKSALAFPMSFPRGYGAQKKVKAWMEEF 256

Query: 794  QQLPYISPYEDCSQIDPNSDLMEKRVVGVLHEFLSLTIHKKTKRNYLRCLREELNLPHKF 973
            Q+LPYISPYED   IDPNS+LMEKRVVGVLHEFLSLTIHKKTKRNYLR LREELNLPHKF
Sbjct: 257  QKLPYISPYEDSRLIDPNSELMEKRVVGVLHEFLSLTIHKKTKRNYLRSLREELNLPHKF 316

Query: 974  TRIFTRYPGIFYLSLKCKTTTITLKEGYQKGKLVDPHPLSRLREKFYYVLRTGVLYRAKG 1153
            TRIFTRYPGIFYLSLKCKTTT+ ++EGY++GKL  PHPL+R+REK+ YV+RTGVLYR KG
Sbjct: 317  TRIFTRYPGIFYLSLKCKTTTVAIREGYRRGKLASPHPLARIREKYNYVMRTGVLYRGKG 376

Query: 1154 VNLLPDEDGVVNDLEDGTEEHNPEEE 1231
             N++P ED +++D ED TE+    EE
Sbjct: 377  TNMMPQEDVLLDDGEDTTEQEESVEE 402


>emb|CBI29972.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  592 bits (1527), Expect = e-167
 Identities = 279/387 (72%), Positives = 331/387 (85%)
 Frame = +2

Query: 74   HSYHLLHQCRGIVKVRLKWVKNRGLDHIIDKETDLKAAVLLKDAIKRTTTGFITSQTISD 253
            H +HL  QCRGIV+VRLKWVKNR LDHIID ETDLKA  LLKDAIKR+++GF+ S ++++
Sbjct: 20   HHHHL--QCRGIVRVRLKWVKNRSLDHIIDTETDLKAVCLLKDAIKRSSSGFLASNSVAN 77

Query: 254  WQKHLGLTIPVLRFLRRYPTLFHEFPHSRYPSLPCFKLTDTALLLDSQEQKIHQAYETNT 433
            WQK LGLT+PVLRF+RRYPTLFHEFPH +YPSLPCF+LTDTAL+L SQE+ IHQ +E +T
Sbjct: 78   WQKLLGLTVPVLRFMRRYPTLFHEFPHPKYPSLPCFRLTDTALMLHSQEESIHQTHEADT 137

Query: 434  VERLCKVLMMMNSKVIPFQSLHPLKWDLGLPDDLIKTLVPKYPDLFRVVKAVNGVSCLGL 613
            VERLCKVLMMM + ++P QSL PLKWDLGLPDD  +TL+PKYPD FRV+KA NGV CL L
Sbjct: 138  VERLCKVLMMMKTSMVPLQSLSPLKWDLGLPDDYHRTLIPKYPDHFRVIKASNGVPCLRL 197

Query: 614  VDWKDEFAVSVLQKRNEMNVEGGNGGYRDFKRGRNVIAFPMSFPRGYGGQKKVRAWMDEF 793
              W++EFAVS LQK +E   E   G YR+FKRG++ +AFPMSFPRGYG QKKV+AWM+EF
Sbjct: 198  GGWREEFAVSALQKSHERG-ELDGGEYREFKRGKSALAFPMSFPRGYGAQKKVKAWMEEF 256

Query: 794  QQLPYISPYEDCSQIDPNSDLMEKRVVGVLHEFLSLTIHKKTKRNYLRCLREELNLPHKF 973
            Q+LPYISPYED   IDPNS+LMEKRVVGVLHEFLSLTIHKKTKRNYLR LREELNLPHKF
Sbjct: 257  QKLPYISPYEDSRLIDPNSELMEKRVVGVLHEFLSLTIHKKTKRNYLRSLREELNLPHKF 316

Query: 974  TRIFTRYPGIFYLSLKCKTTTITLKEGYQKGKLVDPHPLSRLREKFYYVLRTGVLYRAKG 1153
            TRIFTRYPGIFYLSLKCKTTT+ ++EGY++GKL  PHPL+R+REK+ YV+RTGVLYR KG
Sbjct: 317  TRIFTRYPGIFYLSLKCKTTTVAIREGYRRGKLASPHPLARIREKYNYVMRTGVLYRGKG 376

Query: 1154 VNLLPDEDGVVNDLEDGTEEHNPEEEV 1234
             N++P ED +++D ED TE+   + +V
Sbjct: 377  TNMMPQEDVLLDDGEDTTEQEESKNQV 403


>ref|XP_002531167.1| conserved hypothetical protein [Ricinus communis]
            gi|223529237|gb|EEF31210.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 430

 Score =  589 bits (1518), Expect = e-166
 Identities = 281/400 (70%), Positives = 334/400 (83%), Gaps = 3/400 (0%)
 Frame = +2

Query: 53   PNQQHYNHSYHLLHQCRGIVKVRLKWVKNRGLDHIIDKETDLKAAVLLKDAIKRTTTGFI 232
            PN    N+ YH   QCR IVKVRLKWVKNR LDHIID+ETDLKAA LLKDAIKR+ TGF+
Sbjct: 19   PNNIRSNNLYHYFLQCRSIVKVRLKWVKNRSLDHIIDRETDLKAACLLKDAIKRSPTGFL 78

Query: 233  TSQTISDWQKHLGLTIPVLRFLRRYPTLFHEFPHSRYPSLPCFKLTDTALLLDSQEQKIH 412
            T+++++DWQK LGLT+PVLRFLRRYPTLF EFPH+RY +LPCF+LTDTALLLDSQEQ IH
Sbjct: 79   TAKSVADWQKLLGLTVPVLRFLRRYPTLFSEFPHARYTNLPCFRLTDTALLLDSQEQSIH 138

Query: 413  QAYETNTVERLCKVLMMMNSKVIPFQSLHPLKWDLGLPDDLIKTLVPKYPDLFRVVKAVN 592
            Q YE +TVERLC++LMMM S+ +P QSLHPLKWDLGLPD+  + L+PK+PD F+ V+A N
Sbjct: 139  QNYERDTVERLCRLLMMMKSRTVPLQSLHPLKWDLGLPDNFERILIPKHPDYFQYVRASN 198

Query: 593  GVSCLGLVDWKDEFAVSVLQKRNEMNVEGGNGGYRDFKRGRNVIAFPMSFPRGYGGQKKV 772
            GV CL L  W++EFAVS LQ+ +E    G    Y+ FKRG+  +AFPMSFPRGYG QKKV
Sbjct: 199  GVGCLRLAQWREEFAVSALQRSSESKEMGNK--YQQFKRGQTTLAFPMSFPRGYGAQKKV 256

Query: 773  RAWMDEFQQLPYISPYEDCSQIDPNSDLMEKRVVGVLHEFLSLTIHKKTKRNYLRCLREE 952
            RAWM+EFQ+LPYISPYED  QIDPNS+LMEKRVVG+LHE LSLTIHKKTKRNYLR +REE
Sbjct: 257  RAWMEEFQKLPYISPYEDSRQIDPNSELMEKRVVGLLHELLSLTIHKKTKRNYLRSVREE 316

Query: 953  LNLPHKFTRIFTRYPGIFYLSLKCKTTTITLKEGYQKGKLVDPHPLSRLREKFYYVLRTG 1132
            L LPHKFTR+FTRYPGIFYLSLKCKTTT+ L+EGYQ+GKLV+PHP++RLR+KFY+V+RTG
Sbjct: 317  LILPHKFTRLFTRYPGIFYLSLKCKTTTVALREGYQRGKLVNPHPIARLRDKFYHVMRTG 376

Query: 1133 VLYRAKGVNLLPDEDGVVNDLEDGT---EEHNPEEEVGTD 1243
            +LYR KG N +P +D ++ND+ED T   E    E+E G D
Sbjct: 377  LLYRNKGENAIP-QDILLNDVEDETVLDESEEEEDETGDD 415


>ref|NP_567068.1| ubiquitin thiolesterase [Arabidopsis thaliana]
            gi|15810016|gb|AAL06935.1| AT3g58520/F14P22_110
            [Arabidopsis thaliana] gi|22135767|gb|AAM91040.1|
            AT3g58520/F14P22_110 [Arabidopsis thaliana]
            gi|332646273|gb|AEE79794.1| ubiquitin thiolesterase
            [Arabidopsis thaliana]
          Length = 418

 Score =  564 bits (1454), Expect = e-158
 Identities = 273/388 (70%), Positives = 323/388 (83%), Gaps = 4/388 (1%)
 Frame = +2

Query: 80   YHLLHQCRGI---VKVRLKWVKNRGLDHIIDKETDLKAAVLLKDAIKRTTTGFITSQTIS 250
            +H   Q RG+    KVRLKWVKN+ LDH+ID ETDLKAA +LKDAIKR+ TGF+T+++++
Sbjct: 16   FHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVA 75

Query: 251  DWQKHLGLTIPVLRFLRRYPTLFHEFPHSRYPSLPCFKLTDTALLLDSQEQKIHQAYETN 430
            DWQK LGLT+PVLRFLRRYPTLFHEFPH+RY SLPCFKLTDTAL+LDSQE+ IHQ++E +
Sbjct: 76   DWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEAD 135

Query: 431  TVERLCKVLMMMNSKVIPFQSLHPLKWDLGLPDDLIKTLVPKYPDLFRVVKAVNGVSCLG 610
            TVERLC+VLMMM SK +  +SLH LK+DLGLPD+  KTLV KYPD F  VKA NG  CL 
Sbjct: 136  TVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLK 195

Query: 611  LVDWKDEFAVSVLQKRNEMN-VEGGNGGYRDFKRGRNVIAFPMSFPRGYGGQKKVRAWMD 787
            LV W+DEFA S LQKRNE N V G    YR+FKRG++ + FPMSFPRGYG QKKV+AWMD
Sbjct: 196  LVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMD 255

Query: 788  EFQQLPYISPYEDCSQIDPNSDLMEKRVVGVLHEFLSLTIHKKTKRNYLRCLREELNLPH 967
            EFQ+LPYISPY+D S IDP SDLMEKR V VLHE LSLTIHKKTKRNYLR +R ELN+PH
Sbjct: 256  EFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPH 315

Query: 968  KFTRIFTRYPGIFYLSLKCKTTTITLKEGYQKGKLVDPHPLSRLREKFYYVLRTGVLYRA 1147
            KFTR+FTRYPGIFYLSLKCKTTT+ LKEGY++GKLVDPHPL+RLR+KFY+V+RTG LYRA
Sbjct: 316  KFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRA 375

Query: 1148 KGVNLLPDEDGVVNDLEDGTEEHNPEEE 1231
            +G+ ++  E+ +++  ED  EE   EEE
Sbjct: 376  RGLGMVSKEELLLDRPEDDLEEEGSEEE 403


>gb|AAM61144.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score =  562 bits (1448), Expect = e-158
 Identities = 269/376 (71%), Positives = 318/376 (84%), Gaps = 1/376 (0%)
 Frame = +2

Query: 107  IVKVRLKWVKNRGLDHIIDKETDLKAAVLLKDAIKRTTTGFITSQTISDWQKHLGLTIPV 286
            + KVRLKWVKN+ LDH+ID ETDLKAA +LKDAIKR+ TGF+T+++++DWQK LGLT+PV
Sbjct: 1    MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 60

Query: 287  LRFLRRYPTLFHEFPHSRYPSLPCFKLTDTALLLDSQEQKIHQAYETNTVERLCKVLMMM 466
            LRFLRRYPTLFHEFPH+RY SLPCFKLTDTAL+LDSQE+ IHQ++E +TVERLC+VLMMM
Sbjct: 61   LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 120

Query: 467  NSKVIPFQSLHPLKWDLGLPDDLIKTLVPKYPDLFRVVKAVNGVSCLGLVDWKDEFAVSV 646
             SK +  +SLH LK+DLGLPD+  KTLV KYPD F  VKA NG  CL LV W+DEFA S 
Sbjct: 121  RSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEFAFSA 180

Query: 647  LQKRNEMN-VEGGNGGYRDFKRGRNVIAFPMSFPRGYGGQKKVRAWMDEFQQLPYISPYE 823
            LQKRNE N V G    YR+FKRG++ + FPMSFPRGYG QKKV+AWMDEFQ+LPYISPY+
Sbjct: 181  LQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYD 240

Query: 824  DCSQIDPNSDLMEKRVVGVLHEFLSLTIHKKTKRNYLRCLREELNLPHKFTRIFTRYPGI 1003
            D S IDP SDLMEKR V VLHE LSLTIHKKTKRNYLR +R ELN+PHKFTR+FTRYPGI
Sbjct: 241  DPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGI 300

Query: 1004 FYLSLKCKTTTITLKEGYQKGKLVDPHPLSRLREKFYYVLRTGVLYRAKGVNLLPDEDGV 1183
            FYLSLKCKTTT+ LKEGY++GKLVDPHPL+RLR+KFY+V+RTG LYRA+G+ ++  E+ +
Sbjct: 301  FYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVSKEELL 360

Query: 1184 VNDLEDGTEEHNPEEE 1231
            ++  ED  EE   EEE
Sbjct: 361  LDRPEDDLEEEGSEEE 376


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