BLASTX nr result

ID: Coptis24_contig00004768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004768
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542452.1| PREDICTED: zinc finger HIT domain-containing...   155   2e-35
ref|NP_001238734.1| uncharacterized protein LOC100527614 [Glycin...   154   6e-35
gb|ABK22660.1| unknown [Picea sitchensis]                             150   9e-34
ref|XP_002263221.1| PREDICTED: zinc finger HIT domain-containing...   149   2e-33
gb|AFK35496.1| unknown [Medicago truncatula]                          137   4e-30

>ref|XP_003542452.1| PREDICTED: zinc finger HIT domain-containing protein 3-like
           [Glycine max]
          Length = 132

 Score =  155 bits (393), Expect = 2e-35
 Identities = 75/131 (57%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = -3

Query: 804 MGPRKCEVCKETQSKYKCPTCFTPYCSLPCFKKHKEIPCEKSVPFEEKKPSPT-SLPEKV 628
           MGPR+C+VC +TQSKYKCP+C+ PYCSL CFKKHKE PC K  P E K  + + S  EK 
Sbjct: 1   MGPRQCQVCNQTQSKYKCPSCYLPYCSLVCFKKHKESPCVKPQPSETKATAVSESFVEKP 60

Query: 627 LRVDEPGHLLQNNRLESIALSTEIRNSLKDEDIQKLICKIDSSNDADNELDKVMELEGFH 448
           L  DE   +LQ  +LE+IA S+EIR++L DE +Q+LIC+ID S++A+NELDK M  E F 
Sbjct: 61  LVADESSEVLQKFQLEAIASSSEIRDALNDEALQELICRIDGSSNAENELDKAMAEEAFR 120

Query: 447 KFTEKVLSVIS 415
            FT+K+LS I+
Sbjct: 121 LFTDKILSTIN 131


>ref|NP_001238734.1| uncharacterized protein LOC100527614 [Glycine max]
           gi|255632778|gb|ACU16742.1| unknown [Glycine max]
          Length = 132

 Score =  154 bits (388), Expect = 6e-35
 Identities = 73/131 (55%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
 Frame = -3

Query: 804 MGPRKCEVCKETQSKYKCPTCFTPYCSLPCFKKHKEIPCEKSVPFEEKKPSPT-SLPEKV 628
           MGPR+C+VC E QSKYKCP+C+ PYCSL CFKKHKE+PC K  P E K  + + S+ EK 
Sbjct: 1   MGPRQCQVCNEAQSKYKCPSCYLPYCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKP 60

Query: 627 LRVDEPGHLLQNNRLESIALSTEIRNSLKDEDIQKLICKIDSSNDADNELDKVMELEGFH 448
           L VDE   +L+  +LE+IA S+EIR++L D+ +Q+LIC+ID S++A+NELDK M  E F 
Sbjct: 61  LVVDESSEVLEKFQLEAIASSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFR 120

Query: 447 KFTEKVLSVIS 415
             T+K+LS I+
Sbjct: 121 LLTDKILSTIN 131


>gb|ABK22660.1| unknown [Picea sitchensis]
          Length = 159

 Score =  150 bits (378), Expect = 9e-34
 Identities = 68/130 (52%), Positives = 89/130 (68%)
 Frame = -3

Query: 804 MGPRKCEVCKETQSKYKCPTCFTPYCSLPCFKKHKEIPCEKSVPFEEKKPSPTSLPEKVL 625
           MG R+C+VC +  SKYKCPTCF PYCSL CFK+HKE+PC +  P       PT  P    
Sbjct: 20  MGGRQCQVCGDAPSKYKCPTCFIPYCSLMCFKQHKEVPCSREAPAVSTDSQPTQPPRSFE 79

Query: 624 RVDEPGHLLQNNRLESIALSTEIRNSLKDEDIQKLICKIDSSNDADNELDKVMELEGFHK 445
             DE G  L   +LE++  S+EIRN LKD+++QK+I +IDSS +A+ ELDK ME   F +
Sbjct: 80  EEDEQGWRLHRTQLEAVVASSEIRNILKDQELQKIILRIDSSENAEEELDKAMEGPHFQE 139

Query: 444 FTEKVLSVIS 415
           FT+K+LS+IS
Sbjct: 140 FTDKILSIIS 149


>ref|XP_002263221.1| PREDICTED: zinc finger HIT domain-containing protein 3 [Vitis
           vinifera] gi|297744281|emb|CBI37251.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score =  149 bits (375), Expect = 2e-33
 Identities = 76/131 (58%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
 Frame = -3

Query: 804 MGPRKCEVCKETQSKYKCPTCFTPYCSLPCFKKHKEIPCEKSVPFEEKKPSPTSL-PEKV 628
           M  R+C+VC E  SKYKCP+C  PYCSL CFKKHKEIPC K V  E K    + L  E+ 
Sbjct: 1   MSRRECKVCNEAASKYKCPSCLIPYCSLVCFKKHKEIPCVKLVSPEVKTNEDSQLLVERP 60

Query: 627 LRVDEPGHLLQNNRLESIALSTEIRNSLKDEDIQKLICKIDSSNDADNELDKVMELEGFH 448
             VDEP  +LQ  +LESIA S+EIR++LKD+D+Q+LI KID S DA+NEL+K M +E F 
Sbjct: 61  YLVDEPNEVLQMLQLESIASSSEIRDALKDQDLQELINKIDQSPDAENELEKAMGIEAFS 120

Query: 447 KFTEKVLSVIS 415
            FT+K+LS IS
Sbjct: 121 IFTDKILSAIS 131


>gb|AFK35496.1| unknown [Medicago truncatula]
          Length = 147

 Score =  137 bits (346), Expect = 4e-30
 Identities = 69/146 (47%), Positives = 96/146 (65%), Gaps = 16/146 (10%)
 Frame = -3

Query: 804 MGPRKCEVCKETQSKYKCPTCFTPYCSLPCFKKHKEIPCEKSVPFEEK---------KPS 652
           MGP++C++C + QSKYKCP C+  YCSL CFKKHKE+PC    P E K         KPS
Sbjct: 1   MGPKQCQICHKAQSKYKCPKCYLLYCSLACFKKHKELPCVDPTPSETKTADLESHVEKPS 60

Query: 651 -------PTSLPEKVLRVDEPGHLLQNNRLESIALSTEIRNSLKDEDIQKLICKIDSSND 493
                     + + ++ VD+ G +LQ  +LE+IA S+EIR++L D+ +Q+LIC+ID S++
Sbjct: 61  VVDNAVVEAPVEKPLVVVDKTGEVLQQFQLEAIASSSEIRDALNDKALQELICQIDCSSN 120

Query: 492 ADNELDKVMELEGFHKFTEKVLSVIS 415
           A+NELDK M  E F  FT K+LS I+
Sbjct: 121 AENELDKAMADEAFRLFTNKILSTIN 146


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