BLASTX nr result

ID: Coptis24_contig00004763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004763
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|22353...   207   9e-52
ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
emb|CBI20154.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|XP_003541159.1| PREDICTED: probable LRR receptor-like serine...   195   4e-48
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...   190   1e-46

>ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|223536184|gb|EEF37837.1|
           kinase, putative [Ricinus communis]
          Length = 897

 Score =  207 bits (527), Expect = 9e-52
 Identities = 108/182 (59%), Positives = 134/182 (73%)
 Frame = +2

Query: 2   TFANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELR 181
           TF NL NLTDFRI GS ++G+IP FIG WT L  LD+QGT+MEGPIP+ IS L  L ELR
Sbjct: 208 TFGNL-NLTDFRIDGSALSGKIPEFIGNWTTLDRLDLQGTSMEGPIPATISQLTILTELR 266

Query: 182 ISDLNVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIP 361
           ISDL+ SS NFP+L+    +E L+LR+C ITGSIP+YIGE  + +K+LDLSFNRLTG IP
Sbjct: 267 ISDLSGSSSNFPNLEATKNMERLILRNCRITGSIPIYIGEMTV-LKQLDLSFNRLTGSIP 325

Query: 362 ETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFESDCFANRLNAI 541
           ++L  L  +  MFLTNN+LTG+I  WI R   T  N+D+SYNNFTGT  + C    +N +
Sbjct: 326 DSLQSLEAIDYMFLTNNSLTGEIPSWILR---TSKNYDLSYNNFTGTVSTSCQQPEVNLV 382

Query: 542 SS 547
           SS
Sbjct: 383 SS 384



 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 48/160 (30%), Positives = 84/160 (52%)
 Frame = +2

Query: 20  NLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRISDLNV 199
           ++T+F++ G  +TG +P  +G  T L+ +D+    + G IP+ ++ L NL+ L      +
Sbjct: 94  HVTNFQLKGFNLTGVLPDELGNLTHLVQIDLTRNYLSGTIPTRLAQLPNLRILSFLGNRL 153

Query: 200 SSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIPETLARL 379
           +    P++  +  LEELVL    + G +P  +G  L N+++L LS N  TG IP+T   L
Sbjct: 154 NGSIPPEIGNIATLEELVLEDNLLGGPLPPSLG-NLRNLRRLLLSANNFTGTIPDTFGNL 212

Query: 380 TKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTG 499
             L    +  + L+G+I  +I   + T D  D+   +  G
Sbjct: 213 -NLTDFRIDGSALSGKIPEFIGNWT-TLDRLDLQGTSMEG 250


>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
           predicted protein [Populus trichocarpa]
          Length = 1015

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/182 (56%), Positives = 134/182 (73%)
 Frame = +2

Query: 2   TFANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELR 181
           TF NLKNLTDFRI GS ++G+IP FIG WT +  LD+QGT+MEGPIPS ISLL+ L+ELR
Sbjct: 212 TFGNLKNLTDFRIDGSELSGKIPNFIGNWTNIERLDLQGTSMEGPIPSTISLLKKLEELR 271

Query: 182 ISDLNVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIP 361
           ISDLN SS  FPDL+++  +  L+LRSCS+ G+IP YIG+ + ++  LDLSFN+ TG IP
Sbjct: 272 ISDLNGSSSTFPDLKDMKNMTTLILRSCSLNGTIPEYIGD-MASLDTLDLSFNKFTGQIP 330

Query: 362 ETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFESDCFANRLNAI 541
            +L  L KL+ MFL NN LTG++  WI     +++  D+SYNNFTG+ +S C    +N +
Sbjct: 331 VSLESLAKLRFMFLNNNLLTGEVPGWI---LNSKNELDLSYNNFTGSTQSSCQQLSVNLV 387

Query: 542 SS 547
           SS
Sbjct: 388 SS 389



 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 42/147 (28%), Positives = 68/147 (46%)
 Frame = +2

Query: 5   FANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRI 184
           F NL +L +  +  + I G IP  + E   L TL +    + G IP     +  L+ L +
Sbjct: 117 FRNLTHLREIDLTRNYINGSIPASLAELPNLQTLSLLANRITGSIPREFGSMATLESLVL 176

Query: 185 SDLNVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIPE 364
            D  +     PDL  L  L+ L+L + + TG+IP   G  L N+    +  + L+G IP 
Sbjct: 177 EDNLLGGSLHPDLGNLRSLKRLLLSANNFTGTIPDTFG-NLKNLTDFRIDGSELSGKIPN 235

Query: 365 TLARLTKLQLMFLTNNTLTGQISPWIS 445
            +   T ++ + L   ++ G I   IS
Sbjct: 236 FIGNWTNIERLDLQGTSMEGPIPSTIS 262



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/133 (29%), Positives = 65/133 (48%)
 Frame = +2

Query: 44  GSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRISDLNVSSMNFPDL 223
           G  +TG  P      T L  +D+    + G IP++++ L NL+ L +    ++     + 
Sbjct: 106 GFNLTGVFPSEFRNLTHLREIDLTRNYINGSIPASLAELPNLQTLSLLANRITGSIPREF 165

Query: 224 QELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIPETLARLTKLQLMFL 403
             +  LE LVL    + GS+   +G  L ++K+L LS N  TG IP+T   L  L    +
Sbjct: 166 GSMATLESLVLEDNLLGGSLHPDLG-NLRSLKRLLLSANNFTGTIPDTFGNLKNLTDFRI 224

Query: 404 TNNTLTGQISPWI 442
             + L+G+I  +I
Sbjct: 225 DGSELSGKIPNFI 237


>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  202 bits (514), Expect = 3e-50
 Identities = 107/183 (58%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   TFANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELR 181
           TF NLKNLTD R+ G+  +G+IP FIG WT+L  LDMQGT+M+GPIPS ISLL NL +LR
Sbjct: 367 TFGNLKNLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQGTSMDGPIPSTISLLTNLTQLR 426

Query: 182 ISDLNVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIP 361
           I+DLN SSM FP+LQ LTK+EELVLR+CSIT SIP YIG K+ ++K LDLSFNRL+G + 
Sbjct: 427 IADLNGSSMAFPNLQNLTKMEELVLRNCSITDSIPDYIG-KMASLKTLDLSFNRLSGQVS 485

Query: 362 ETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFE-SDCFANRLNA 538
           +T + L++L+ +FLTNN+L+G +  WI   S +   FD+SYNNFTG    + C    +N 
Sbjct: 486 DTWS-LSQLEYLFLTNNSLSGTLPSWI---SDSNQKFDVSYNNFTGPSSLTVCQQRAVNL 541

Query: 539 ISS 547
           +SS
Sbjct: 542 VSS 544



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +2

Query: 2   TFAN--LKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKE 175
           TF N  + ++T+ ++ G  +TG +P   G  T L  +D+    + G IP++++ +  L  
Sbjct: 246 TFENSTVCHVTNIQLKGLNLTGIMPDEFGNLTYLQEIDLTRNYLNGSIPTSLAQI-PLVT 304

Query: 176 LRISDLNVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGD 355
           L      +S     ++ ++  LEELVL    + GS+P  +G  L ++ +L L+ N  TG 
Sbjct: 305 LSALGNRLSGSIPKEIGDIATLEELVLEDNQLEGSLPENLG-NLSSLSRLLLTANNFTGT 363

Query: 356 IPETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFES 511
           IPET   L  L  + L  N  +G+I  +I   +   D  D+   +  G   S
Sbjct: 364 IPETFGNLKNLTDVRLDGNAFSGKIPDFIGNWT-QLDRLDMQGTSMDGPIPS 414



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
 Frame = +2

Query: 44  GSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRISDLNVSSMNFPDL 223
           G+ ++G IP  IG+   L  L ++   +EG +P N+  L +L  L ++  N +       
Sbjct: 309 GNRLSGSIPKEIGDIATLEELVLEDNQLEGSLPENLGNLSSLSRLLLTANNFTGTIPETF 368

Query: 224 QELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIPET------------ 367
             L  L ++ L   + +G IP +IG     + +LD+    + G IP T            
Sbjct: 369 GNLKNLTDVRLDGNAFSGKIPDFIG-NWTQLDRLDMQGTSMDGPIPSTISLLTNLTQLRI 427

Query: 368 ------------LARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTG 499
                       L  LTK++ + L N ++T  I  +I + +  +   D+S+N  +G
Sbjct: 428 ADLNGSSMAFPNLQNLTKMEELVLRNCSITDSIPDYIGKMASLK-TLDLSFNRLSG 482


>ref|XP_003541159.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Glycine max]
          Length = 1149

 Score =  195 bits (495), Expect = 4e-48
 Identities = 102/183 (55%), Positives = 130/183 (71%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   TFANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELR 181
           T++ LKNLT+FRI GS ++G IP FIG WT L+ LD+QGTNMEGPIP  IS L+ L ELR
Sbjct: 214 TYSKLKNLTEFRIDGSSLSGPIPSFIGNWTNLIRLDLQGTNMEGPIPPTISQLKLLTELR 273

Query: 182 ISDLNVS-SMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDI 358
           I+DLN   SM FPDL+ LTKL+ L LR+C ITGSIP YIGE + N+  LDLSFN LTG +
Sbjct: 274 ITDLNGGPSMTFPDLKNLTKLKRLELRNCLITGSIPGYIGE-MANLATLDLSFNMLTGSV 332

Query: 359 PETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFESDCFANRLNA 538
           P+++ +L  L  +FLTNN+L+G I  WI      ++N D+SYNNFT +  + C    +N 
Sbjct: 333 PDSIQKLDNLDYLFLTNNSLSGPIQDWI---LSFKNNIDLSYNNFTNSSATSCQLLDVNL 389

Query: 539 ISS 547
            SS
Sbjct: 390 ASS 392



 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
 Frame = +2

Query: 20  NLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRISDLNV 199
           +L    + G+ ++GRIP  IG+   L  L ++   +EGP+P +   L  LK L +S  N 
Sbjct: 148 SLVVLSLLGNRLSGRIPTEIGDIASLEELVLECNQLEGPLPPSFGNLSKLKRLLLSANNF 207

Query: 200 SSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIPETLAR- 376
           +        +L  L E  +   S++G IP +IG    N+ +LDL    + G IP T+++ 
Sbjct: 208 TGTIPETYSKLKNLTEFRIDGSSLSGPIPSFIG-NWTNLIRLDLQGTNMEGPIPPTISQL 266

Query: 377 ------------------------LTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISY 484
                                   LTKL+ + L N  +TG I  +I   +      D+S+
Sbjct: 267 KLLTELRITDLNGGPSMTFPDLKNLTKLKRLELRNCLITGSIPGYIGEMANLA-TLDLSF 325

Query: 485 NNFTGT 502
           N  TG+
Sbjct: 326 NMLTGS 331



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/138 (31%), Positives = 69/138 (50%)
 Frame = +2

Query: 29  DFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRISDLNVSSM 208
           D  + G  I+G  P   G  T+L  LD+    + G +P+N S   +L  L +    +S  
Sbjct: 104 DSFLKGQNISGVFPSEFGNLTQLKELDLTRNYLSGSLPTNFS-PNSLVVLSLLGNRLSGR 162

Query: 209 NFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIPETLARLTKL 388
              ++ ++  LEELVL    + G +P   G  L  +K+L LS N  TG IPET ++L  L
Sbjct: 163 IPTEIGDIASLEELVLECNQLEGPLPPSFG-NLSKLKRLLLSANNFTGTIPETYSKLKNL 221

Query: 389 QLMFLTNNTLTGQISPWI 442
               +  ++L+G I  +I
Sbjct: 222 TEFRIDGSSLSGPIPSFI 239


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
           gi|355485310|gb|AES66513.1| Receptor-like
           serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score =  190 bits (483), Expect = 1e-46
 Identities = 100/182 (54%), Positives = 130/182 (71%), Gaps = 1/182 (0%)
 Frame = +2

Query: 5   FANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRI 184
           F NLKNLT+FRI GS ++G+IP FIG WT+L  LD+QGT++EGPIP  +S+L+NLKELRI
Sbjct: 208 FGNLKNLTNFRIDGSSLSGKIPSFIGNWTKLERLDLQGTSLEGPIPPAVSVLKNLKELRI 267

Query: 185 SDL-NVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIP 361
           SDL   ++M FPDL++L +++ L LR+C ITG IP YIGE L N+K +DLS NRLTG IP
Sbjct: 268 SDLKGNTTMTFPDLKDLKRMQRLELRNCLITGPIPDYIGE-LENLKTIDLSSNRLTGPIP 326

Query: 362 ETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFESDCFANRLNAI 541
            +L  L  +  +FLTNN+L G I  WI      + NFD+S+NNFT +   DC    +N  
Sbjct: 327 GSLEDLESINFVFLTNNSLNGTIPGWI---LSNKQNFDLSFNNFTESSAPDCQILDVNLA 383

Query: 542 SS 547
           SS
Sbjct: 384 SS 385



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/147 (32%), Positives = 77/147 (52%)
 Frame = +2

Query: 5   FANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELRI 184
           F NL +L    +  + I G IP  +G  + L+TL + G  + GPIPS I  +  L+E+ +
Sbjct: 112 FGNLTHLKTLDLTRNYINGSIPKSLGGLSSLVTLSLLGNRLSGPIPSEIGDISTLQEMNV 171

Query: 185 SDLNVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIPE 364
            D  +     P+L  L  L++L+L + + TG+IP   G  L N+    +  + L+G IP 
Sbjct: 172 EDNQLEGNLPPNLGNLKNLQKLMLSANNFTGTIPEAFG-NLKNLTNFRIDGSSLSGKIPS 230

Query: 365 TLARLTKLQLMFLTNNTLTGQISPWIS 445
            +   TKL+ + L   +L G I P +S
Sbjct: 231 FIGNWTKLERLDLQGTSLEGPIPPAVS 257



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 49/178 (27%), Positives = 81/178 (45%)
 Frame = +2

Query: 2   TFANLKNLTDFRIAGSGITGRIPGFIGEWTRLLTLDMQGTNMEGPIPSNISLLRNLKELR 181
           T ++  N  ++++          GF  E   ++  D    N+      N S + ++  + 
Sbjct: 42  TISDKVNNLNWKVTNRSCNSGDKGFGNE---IIVEDQIVRNVTCDCSFNSSTVCHVTMIF 98

Query: 182 ISDLNVSSMNFPDLQELTKLEELVLRSCSITGSIPLYIGEKLLNIKKLDLSFNRLTGDIP 361
           +  LN+S +   +   LT L+ L L    I GSIP  +G  L ++  L L  NRL+G IP
Sbjct: 99  LKGLNISGIFPSEFGNLTHLKTLDLTRNYINGSIPKSLG-GLSSLVTLSLLGNRLSGPIP 157

Query: 362 ETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFESDCFANRLN 535
             +  ++ LQ M + +N L G + P +      +    +S NNFTGT   + F N  N
Sbjct: 158 SEIGDISTLQEMNVEDNQLEGNLPPNLGNLKNLQ-KLMLSANNFTGTI-PEAFGNLKN 213


Top