BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004758
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   353   3e-95
emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]   353   3e-95
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   342   5e-92
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   338   6e-91
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   328   8e-88

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  353 bits (905), Expect = 3e-95
 Identities = 174/227 (76%), Positives = 192/227 (84%)
 Frame = +2

Query: 2   TGNAFLRYYSVFGSLTEMEVAYGRFKKSRILIEEEGIRAMASAYIKKRKFYKLGEFLRDV 181
           TGNAF+RYYS+FGSLTEME AY R KKSRILIEEEGIRAM+ AYIK++K+Y+LG+FLRDV
Sbjct: 197 TGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKKYYRLGQFLRDV 256

Query: 182 GLGRRNVGNLLWNFLLLSYAANFKMKSLQKEFLNMVEAGFSPDLTTFNIRALAFSRMSLF 361
           GLGR+NVGNLLWN LLLSYAANFKMKSLQ+EFL MVEAGF+PDLTTFNIRALAFSRMSLF
Sbjct: 257 GLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLEMVEAGFAPDLTTFNIRALAFSRMSLF 316

Query: 362 WDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDSPHVSTDPLVF 541
           WDLH+SLEHM+H KV  DLVTYGC+VDAYLDR+LG+NL+FAL KM+ DDSP VSTD  VF
Sbjct: 317 WDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDSPLVSTDHFVF 376

Query: 542 EVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 682
           EV GKGDFHSSSEA LE K   K T             R NQIFWNY
Sbjct: 377 EVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 423


>emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]
          Length = 446

 Score =  353 bits (905), Expect = 3e-95
 Identities = 174/227 (76%), Positives = 192/227 (84%)
 Frame = +2

Query: 2   TGNAFLRYYSVFGSLTEMEVAYGRFKKSRILIEEEGIRAMASAYIKKRKFYKLGEFLRDV 181
           TGNAF+RYYS+FGSLTEME AY R KKSRILIEEEGIRAM+ AYIK++K+Y+LG+FLRDV
Sbjct: 220 TGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKKYYRLGQFLRDV 279

Query: 182 GLGRRNVGNLLWNFLLLSYAANFKMKSLQKEFLNMVEAGFSPDLTTFNIRALAFSRMSLF 361
           GLGR+NVGNLLWN LLLSYAANFKMKSLQ+EFL MVEAGF+PDLTTFNIRALAFSRMSLF
Sbjct: 280 GLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLEMVEAGFAPDLTTFNIRALAFSRMSLF 339

Query: 362 WDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDSPHVSTDPLVF 541
           WDLH+SLEHM+H KV  DLVTYGC+VDAYLDR+LG+NL+FAL KM+ DDSP VSTD  VF
Sbjct: 340 WDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDSPLVSTDHFVF 399

Query: 542 EVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 682
           EV GKGDFHSSSEA LE K   K T             R NQIFWNY
Sbjct: 400 EVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 446


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  342 bits (877), Expect = 5e-92
 Identities = 162/227 (71%), Positives = 193/227 (85%)
 Frame = +2

Query: 2   TGNAFLRYYSVFGSLTEMEVAYGRFKKSRILIEEEGIRAMASAYIKKRKFYKLGEFLRDV 181
           TGNAF+RYYS+ GSLT+ME AY R K+SR L++ EGIRA++ AY+K+RKFY+LGEFLRDV
Sbjct: 201 TGNAFIRYYSIHGSLTDMESAYSRLKRSRHLVDREGIRAVSLAYVKERKFYRLGEFLRDV 260

Query: 182 GLGRRNVGNLLWNFLLLSYAANFKMKSLQKEFLNMVEAGFSPDLTTFNIRALAFSRMSLF 361
           GLGR++VGNL+WNFLLLS+AANFKMKSLQ+EFL M+EAGF PD+TTFNIRALAFSRMSL 
Sbjct: 261 GLGRKDVGNLIWNFLLLSFAANFKMKSLQREFLRMLEAGFHPDVTTFNIRALAFSRMSLL 320

Query: 362 WDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDSPHVSTDPLVF 541
           WDLH++LEHMKHEKV+PD+VTYGCIVDAYLDR+LG+NL+FA+ KM+ D SP + TDP VF
Sbjct: 321 WDLHLTLEHMKHEKVSPDIVTYGCIVDAYLDRRLGKNLDFAIKKMNLDGSPVLLTDPFVF 380

Query: 542 EVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 682
           EV GKGDFHSS+EA LE+K +RK T             R NQIFWNY
Sbjct: 381 EVLGKGDFHSSAEAFLEFKRQRKWTYRELVSIYLRKQYRSNQIFWNY 427


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  338 bits (868), Expect = 6e-91
 Identities = 165/227 (72%), Positives = 187/227 (82%)
 Frame = +2

Query: 2   TGNAFLRYYSVFGSLTEMEVAYGRFKKSRILIEEEGIRAMASAYIKKRKFYKLGEFLRDV 181
           TGNAF+ YYS+ GSL EME AY R K+SR+LIE EGIRAM+ AYIK+RKFY L EFLRDV
Sbjct: 202 TGNAFVVYYSLHGSLAEMEAAYDRLKRSRLLIEREGIRAMSFAYIKERKFYGLSEFLRDV 261

Query: 182 GLGRRNVGNLLWNFLLLSYAANFKMKSLQKEFLNMVEAGFSPDLTTFNIRALAFSRMSLF 361
           GLGR+N+GNL+WN LLLSY+ANFKMK+LQ+EFLNM+EAGF PDLTTFNIRALAFSRMSL 
Sbjct: 262 GLGRKNLGNLIWNLLLLSYSANFKMKTLQREFLNMLEAGFHPDLTTFNIRALAFSRMSLL 321

Query: 362 WDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDSPHVSTDPLVF 541
           WDLH+ LEHMKH+KV PDLVTYGCIVDAYLDR+L RNL FAL+KM  D+SP +STDP VF
Sbjct: 322 WDLHLGLEHMKHDKVAPDLVTYGCIVDAYLDRRLVRNLEFALSKMHVDNSPVLSTDPFVF 381

Query: 542 EVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 682
           EVFGKGDFHSSSEA +E+K +RK T             R   IFWNY
Sbjct: 382 EVFGKGDFHSSSEAFMEFKRQRKWTYRELIKIYLRKQHRSKHIFWNY 428


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  328 bits (841), Expect = 8e-88
 Identities = 157/227 (69%), Positives = 183/227 (80%)
 Frame = +2

Query: 2   TGNAFLRYYSVFGSLTEMEVAYGRFKKSRILIEEEGIRAMASAYIKKRKFYKLGEFLRDV 181
           TGN+F+ YYS+FGSL EME AYGR K+SR LIE++GI AMA AYI+KRKFY+LGEFLRDV
Sbjct: 162 TGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDV 221

Query: 182 GLGRRNVGNLLWNFLLLSYAANFKMKSLQKEFLNMVEAGFSPDLTTFNIRALAFSRMSLF 361
           GLGR+NVGNLLWN LLLSYAANFKMKSLQ+EFL MV+AGF+PDLTTFNIRALAFSRM L 
Sbjct: 222 GLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAFSRMDLL 281

Query: 362 WDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDSPHVSTDPLVF 541
           WDLH+SLEHMKH  + PDLVTYGC+VDAY+DR+LGRNL F L+KM+ D  P   TD  VF
Sbjct: 282 WDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSLTDSFVF 341

Query: 542 EVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 682
           E  GKGDFH SSEA ++++ ++K T             R NQ+FWNY
Sbjct: 342 EALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 388