BLASTX nr result

ID: Coptis24_contig00004757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004757
         (2557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279867.1| PREDICTED: developmentally-regulated GTP-bin...   645   0.0  
ref|XP_003526832.1| PREDICTED: developmentally-regulated GTP-bin...   644   0.0  
ref|NP_001241891.1| uncharacterized protein LOC100797441 [Glycin...   640   0.0  
ref|XP_002532275.1| developmentally regulated GTP-binding protei...   635   e-179
ref|XP_003602486.1| Developmentally regulated GTP binding protei...   632   e-178

>ref|XP_002279867.1| PREDICTED: developmentally-regulated GTP-binding protein 1 [Vitis
            vinifera] gi|296082507|emb|CBI21512.3| unnamed protein
            product [Vitis vinifera]
          Length = 368

 Score =  645 bits (1664), Expect = 0.0
 Identities = 323/368 (87%), Positives = 331/368 (89%)
 Frame = +2

Query: 53   MSTVMQKIKDIEDEMGRTQKNXXXXXXXXXXXXXXXXXXXXXXDPPSKXXXXXXXXFDVT 232
            M+TVMQKIKDIEDEM RTQKN                       P SK        FDVT
Sbjct: 1    MATVMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLAPSSKGAGGPGEGFDVT 60

Query: 233  KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 412
            KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61   KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120

Query: 413  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 592
            IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180

Query: 593  FRKKEKGGLNFTSTVTTTHLDLETVKAICGEYRIHNADVSLRYDATADDLIDVIEGSRVY 772
            FRKK+KGG+NFTSTVT T+LDLETVKAIC EYRIHNADVSLRYDATADDLIDVIEGSRVY
Sbjct: 181  FRKKDKGGINFTSTVTNTNLDLETVKAICSEYRIHNADVSLRYDATADDLIDVIEGSRVY 240

Query: 773  IPCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGVLEKIWEYLDLTRIYTKPKG 952
            IPCIY VNKIDQITLEELE+LDKLPHYCPVSAHLEWNLDG+LEKIWEYLDLTRIYTKPKG
Sbjct: 241  IPCIYAVNKIDQITLEELEVLDKLPHYCPVSAHLEWNLDGLLEKIWEYLDLTRIYTKPKG 300

Query: 953  MNPDYEDPVILSSKHRTVEDFCSRIHKDMLKQFKFALVWGSSVKHRPQRVGREHELEDED 1132
            MNPDYEDPVILSSK RTVEDFCSRIHKDMLKQFK+ALVWGSSVKH+PQRVGREHELEDED
Sbjct: 301  MNPDYEDPVILSSKRRTVEDFCSRIHKDMLKQFKYALVWGSSVKHKPQRVGREHELEDED 360

Query: 1133 VVQIIKKV 1156
            VVQIIKKV
Sbjct: 361  VVQIIKKV 368


>ref|XP_003526832.1| PREDICTED: developmentally-regulated GTP-binding protein 1-like
            [Glycine max]
          Length = 368

 Score =  644 bits (1661), Expect = 0.0
 Identities = 321/368 (87%), Positives = 330/368 (89%)
 Frame = +2

Query: 53   MSTVMQKIKDIEDEMGRTQKNXXXXXXXXXXXXXXXXXXXXXXDPPSKXXXXXXXXFDVT 232
            M+TVMQKIKDIEDEM RTQKN                       P SK        FDVT
Sbjct: 1    MATVMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVT 60

Query: 233  KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 412
            KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61   KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120

Query: 413  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 592
            IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180

Query: 593  FRKKEKGGLNFTSTVTTTHLDLETVKAICGEYRIHNADVSLRYDATADDLIDVIEGSRVY 772
            FRKK+KGGLN TSTVTTTHLDLETVKAIC EYRIHNAD++LRYDATADDLIDVIEGSRVY
Sbjct: 181  FRKKDKGGLNLTSTVTTTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVY 240

Query: 773  IPCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGVLEKIWEYLDLTRIYTKPKG 952
            IPCIYVVNKIDQITLEELEILDKLPHYCP+SAHLEWNLDG+LEKIWEYLDLTRIYTKPKG
Sbjct: 241  IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLDLTRIYTKPKG 300

Query: 953  MNPDYEDPVILSSKHRTVEDFCSRIHKDMLKQFKFALVWGSSVKHRPQRVGREHELEDED 1132
            MNPDYEDPVILSSK RTVEDFC RIHKDMLKQFK+ALVWGSS KH+PQRVG+EHELEDED
Sbjct: 301  MNPDYEDPVILSSKKRTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360

Query: 1133 VVQIIKKV 1156
            VVQIIKKV
Sbjct: 361  VVQIIKKV 368


>ref|NP_001241891.1| uncharacterized protein LOC100797441 [Glycine max]
            gi|255642041|gb|ACU21287.1| unknown [Glycine max]
          Length = 368

 Score =  640 bits (1650), Expect = 0.0
 Identities = 318/368 (86%), Positives = 330/368 (89%)
 Frame = +2

Query: 53   MSTVMQKIKDIEDEMGRTQKNXXXXXXXXXXXXXXXXXXXXXXDPPSKXXXXXXXXFDVT 232
            M+TVMQKIKDIEDEM +TQKN                       P SK        FDVT
Sbjct: 1    MATVMQKIKDIEDEMAKTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGKGFDVT 60

Query: 233  KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 412
            KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61   KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120

Query: 413  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 592
            IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180

Query: 593  FRKKEKGGLNFTSTVTTTHLDLETVKAICGEYRIHNADVSLRYDATADDLIDVIEGSRVY 772
            FRKK+KGGLN TSTVTTTHLDL+TVKAIC EYRIHNAD++LRYDATADDLIDVIEGSRVY
Sbjct: 181  FRKKDKGGLNLTSTVTTTHLDLDTVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVY 240

Query: 773  IPCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGVLEKIWEYLDLTRIYTKPKG 952
            IPCIYVVNKIDQITLEELEILDKLPHYCP+SAHLEWNLDG+LEKIWEYL+LTRIYTKPKG
Sbjct: 241  IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLNLTRIYTKPKG 300

Query: 953  MNPDYEDPVILSSKHRTVEDFCSRIHKDMLKQFKFALVWGSSVKHRPQRVGREHELEDED 1132
            MNPDYEDPVILSSK RTVEDFC RIHKDMLKQFK+ALVWGSS KH+PQRVG+EHELEDED
Sbjct: 301  MNPDYEDPVILSSKKRTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360

Query: 1133 VVQIIKKV 1156
            VVQIIKKV
Sbjct: 361  VVQIIKKV 368


>ref|XP_002532275.1| developmentally regulated GTP-binding protein, putative [Ricinus
            communis] gi|223528035|gb|EEF30115.1| developmentally
            regulated GTP-binding protein, putative [Ricinus
            communis]
          Length = 368

 Score =  635 bits (1638), Expect = e-179
 Identities = 313/368 (85%), Positives = 329/368 (89%)
 Frame = +2

Query: 53   MSTVMQKIKDIEDEMGRTQKNXXXXXXXXXXXXXXXXXXXXXXDPPSKXXXXXXXXFDVT 232
            M+TVMQKIKDIEDEM RTQKN                      +P SK        FDVT
Sbjct: 1    MATVMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLEPSSKGGGGAGQGFDVT 60

Query: 233  KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 412
            KSGD+RVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVI YRGAKIQLLDLPG
Sbjct: 61   KSGDARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVIVYRGAKIQLLDLPG 120

Query: 413  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 592
            IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180

Query: 593  FRKKEKGGLNFTSTVTTTHLDLETVKAICGEYRIHNADVSLRYDATADDLIDVIEGSRVY 772
            FRKK+KGG+NFT+TV  THLDLETVKAIC EYRIHNAD++LRYDATADDLIDVIEGSR+Y
Sbjct: 181  FRKKDKGGINFTTTVANTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRIY 240

Query: 773  IPCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGVLEKIWEYLDLTRIYTKPKG 952
            +PCIYVVNKIDQITLEELEILDKLPHYCP+SAHLEWNLDG+L+KIWEYLDLTRIYTKPKG
Sbjct: 241  MPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLDKIWEYLDLTRIYTKPKG 300

Query: 953  MNPDYEDPVILSSKHRTVEDFCSRIHKDMLKQFKFALVWGSSVKHRPQRVGREHELEDED 1132
            MNPDYEDPVILSSK RTVEDFC RIHKDMLKQFK+ALVWGSS KH+PQRVG+EHELEDED
Sbjct: 301  MNPDYEDPVILSSKKRTVEDFCIRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360

Query: 1133 VVQIIKKV 1156
            VVQIIKKV
Sbjct: 361  VVQIIKKV 368


>ref|XP_003602486.1| Developmentally regulated GTP binding protein [Medicago truncatula]
            gi|355491534|gb|AES72737.1| Developmentally regulated GTP
            binding protein [Medicago truncatula]
          Length = 368

 Score =  632 bits (1631), Expect = e-178
 Identities = 312/368 (84%), Positives = 328/368 (89%)
 Frame = +2

Query: 53   MSTVMQKIKDIEDEMGRTQKNXXXXXXXXXXXXXXXXXXXXXXDPPSKXXXXXXXXFDVT 232
            MSTVMQKIKDIEDEM +TQKN                       P +K        FDVT
Sbjct: 1    MSTVMQKIKDIEDEMAKTQKNKATAHHLGLLKAKLAKLRRELLTPTTKGGGGAGEGFDVT 60

Query: 233  KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 412
            KSGD+RVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61   KSGDARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120

Query: 413  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 592
            IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121  IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180

Query: 593  FRKKEKGGLNFTSTVTTTHLDLETVKAICGEYRIHNADVSLRYDATADDLIDVIEGSRVY 772
            FR+KEKGG+NFTST T THLDL+TVKAIC EYRIHNAD++LRYDATADDLIDVIEGSRVY
Sbjct: 181  FRRKEKGGINFTSTATNTHLDLDTVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVY 240

Query: 773  IPCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGVLEKIWEYLDLTRIYTKPKG 952
             PCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDG+L+K+WEYL+LTRIYTKPKG
Sbjct: 241  TPCIYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLDKVWEYLNLTRIYTKPKG 300

Query: 953  MNPDYEDPVILSSKHRTVEDFCSRIHKDMLKQFKFALVWGSSVKHRPQRVGREHELEDED 1132
            MNPDYEDPVILSSK +TVEDFC RIHKDMLKQFK+ALVWGSS KH+PQRVG+EHELEDED
Sbjct: 301  MNPDYEDPVILSSKKKTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360

Query: 1133 VVQIIKKV 1156
            VVQIIKKV
Sbjct: 361  VVQIIKKV 368


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