BLASTX nr result

ID: Coptis24_contig00004742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004742
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15772.3| unnamed protein product [Vitis vinifera]              106   8e-21
ref|XP_002284717.1| PREDICTED: uncharacterized protein LOC100254...   106   8e-21
ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223...   104   4e-20
ref|XP_002511069.1| conserved hypothetical protein [Ricinus comm...   100   6e-19
ref|NP_001237926.1| uncharacterized protein LOC100305868 [Glycin...    94   6e-17

>emb|CBI15772.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  106 bits (265), Expect = 8e-21
 Identities = 62/137 (45%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
 Frame = +1

Query: 241 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVKGDYVPVYITLGMIALSVSLGISTAM 420
           S  TFATST    +  A T D       ++ RGVKGD+VPVY+ +GMIA+SV+LG+ TAM
Sbjct: 92  SHYTFATSTSPKMRAYAPTADFS-NVQHSELRGVKGDFVPVYVAMGMIAMSVTLGLCTAM 150

Query: 421 HHLKYSPAVQVSKKKRXXXXXXXXXXYVADEAEKFINASFFRKVSHT---------TGDI 573
           H L YSPAV + K +R           V DE +KF+  S  RKV+H            D 
Sbjct: 151 HELMYSPAVHLRKSRRETLPEVEDPDTVVDEGDKFVKKSLLRKVAHVQELELVPHPIEDP 210

Query: 574 QTRPLKMETLKSVGVDP 624
            TRP +  TLKSVG+DP
Sbjct: 211 LTRPPRAVTLKSVGIDP 227


>ref|XP_002284717.1| PREDICTED: uncharacterized protein LOC100254405 [Vitis vinifera]
          Length = 158

 Score =  106 bits (265), Expect = 8e-21
 Identities = 62/137 (45%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
 Frame = +1

Query: 241 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVKGDYVPVYITLGMIALSVSLGISTAM 420
           S  TFATST    +  A T D       ++ RGVKGD+VPVY+ +GMIA+SV+LG+ TAM
Sbjct: 20  SHYTFATSTSPKMRAYAPTADFS-NVQHSELRGVKGDFVPVYVAMGMIAMSVTLGLCTAM 78

Query: 421 HHLKYSPAVQVSKKKRXXXXXXXXXXYVADEAEKFINASFFRKVSHT---------TGDI 573
           H L YSPAV + K +R           V DE +KF+  S  RKV+H            D 
Sbjct: 79  HELMYSPAVHLRKSRRETLPEVEDPDTVVDEGDKFVKKSLLRKVAHVQELELVPHPIEDP 138

Query: 574 QTRPLKMETLKSVGVDP 624
            TRP +  TLKSVG+DP
Sbjct: 139 LTRPPRAVTLKSVGIDP 155


>ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223310 [Cucumis sativus]
          Length = 168

 Score =  104 bits (259), Expect = 4e-20
 Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 17/147 (11%)
 Frame = +1

Query: 241 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVK-GDYVPVYITLGMIALSVSLGISTA 417
           S RT+AT+T    K  A T D      ++KP+  + GD+VPVY+ +GMIALSV LG+  A
Sbjct: 21  STRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYVAIGMIALSVGLGLHMA 80

Query: 418 MHHLKYSPAVQVSKKKRXXXXXXXXXXYVADEAEKFINASFFRKVSH------------- 558
              L +SP+V V KK+R          +VA+E EKF   SFFRKV+H             
Sbjct: 81  KQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRKVAHIQEVEKFGDYKVP 140

Query: 559 ---TTGDIQTRPLKMETLKSVGVDPAK 630
                GD    P + E+LKSVG+DPA+
Sbjct: 141 YDPLLGDAYAHPHRTESLKSVGIDPAR 167


>ref|XP_002511069.1| conserved hypothetical protein [Ricinus communis]
           gi|223550184|gb|EEF51671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  100 bits (249), Expect = 6e-19
 Identities = 65/159 (40%), Positives = 83/159 (52%), Gaps = 18/159 (11%)
 Frame = +1

Query: 202 MAFRKMDLMRTLLSR----RTFATSTILNSKQVAATVD-----AQVEGPKAKPRGVKGDY 354
           MAFR     + +++R     T+ TST    K  A   D      + E  K+K  G KGDY
Sbjct: 1   MAFRSTGYWKQMVNRLRGNATYGTSTSPKMKAYAPAADDFGNVLREERSKSK-MGQKGDY 59

Query: 355 VPVYITLGMIALSVSLGISTAMHHLKYSPAVQVSKKKRXXXXXXXXXXYVADEAEKFINA 534
           VPVY+ LG+IALS  LG+ TA   L YSP+V+V KK R           V DEA KF+  
Sbjct: 60  VPVYVALGLIALSTMLGLHTAKQQLLYSPSVRVKKKLRETIPEVVCPEKVVDEAHKFVAK 119

Query: 535 SFFRKVSH---------TTGDIQTRPLKMETLKSVGVDP 624
           SF RK +H         +  DI   P + ETLKS+G+DP
Sbjct: 120 SFLRKAAHIQEFDSALQSLPDIYANPPRAETLKSIGIDP 158


>ref|NP_001237926.1| uncharacterized protein LOC100305868 [Glycine max]
           gi|255626835|gb|ACU13762.1| unknown [Glycine max]
          Length = 163

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 62/163 (38%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
 Frame = +1

Query: 202 MAFRKMD------LMRTLLSRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVKGDYVPV 363
           M FR M       L  +   +  +ATST    K  AA  D   +    K    K D+V +
Sbjct: 1   MVFRPMSGNWLALLRNSYGGKAAYATSTAPKMKAYAAAADYGHKQQHGK--SAKRDFVAI 58

Query: 364 YITLGMIALSVSLGISTAMHHLKYSPAVQVSKKKRXXXXXXXXXXYVADEAEKFINASFF 543
           Y+ +GMIALS  LG+ TA   L+ SP V V K++R          +VA+EAEKF+  SFF
Sbjct: 59  YVAIGMIALSTGLGLHTAWQQLRNSPTVSVKKQRRETLPEVVEPDHVAEEAEKFMKKSFF 118

Query: 544 RKVSHTT---------------GDIQTRPLKMETLKSVGVDPA 627
           RKV+H                 GD  T   ++ETLKSVGVDP+
Sbjct: 119 RKVAHVQERSYPDHHQILSPIHGDAYTYTPRVETLKSVGVDPS 161


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