BLASTX nr result

ID: Coptis24_contig00004741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004741
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267...   594   e-167
ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802...   548   e-153
ref|XP_002511501.1| zinc finger protein, putative [Ricinus commu...   544   e-152
emb|CBI15292.3| unnamed protein product [Vitis vinifera]              525   e-146
ref|XP_002322131.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143

>ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267228 [Vitis vinifera]
          Length = 1288

 Score =  594 bits (1532), Expect = e-167
 Identities = 281/437 (64%), Positives = 331/437 (75%), Gaps = 2/437 (0%)
 Frame = +1

Query: 1    HNISIVAEEPDILPLQSVDPLEIIATYLDKKDYHDLDGSELSSKRLTFQSQESFGADFEI 180
            ++I+ V EE  +      DPLE+++ YL K+D     G E+S K   F   +S  A+  +
Sbjct: 857  YDIAKVVEESKMPQPWLADPLEVVSRYLYKED----TGEEVSEKSDEFLLNDSVSANIML 912

Query: 181  SGDSDGDDKMKNLLADVDTNQCSELTELQSDNHKQNIQKVVSVTEPVYRPGEHLSTSQKF 360
             G+   D+K K L  D D +QCSE  +  S+N K+   +V  VT  V RPG+ L  +Q+F
Sbjct: 913  PGNHAVDNKEKLLNEDHDNHQCSECKKPYSENEKKRSNEVADVTNQVNRPGQLLQDNQQF 972

Query: 361  KHLEERILGMSQEDLEAAIRRVHRDATLDLQKKSFITQSLLTSRWTVTQQKPHQEVILSS 540
             H +E +L MSQ+DLEAAIRRV RD++LD QKKS I Q+LL SRW V QQK H EV +  
Sbjct: 973  SH-QEHLLSMSQDDLEAAIRRVSRDSSLDPQKKSHIIQNLLMSRWIVRQQKSHSEVAVLG 1031

Query: 541  NDGEIPGQFPSYRDPL--TFGCKHYKRNCKVLAACCMQLFTCRYCHDDTADHAMDRKSTI 714
            +  EIPGQ PSYRDPL  TFGCKHYKRNCK++AACC QL+ CR CHDD  DH+MDRK T 
Sbjct: 1032 SGKEIPGQCPSYRDPLKLTFGCKHYKRNCKLVAACCNQLYACRLCHDDVTDHSMDRKKTT 1091

Query: 715  KMMCMKCLKVQPVGATCSTISCNGFSMAKFFCIICRLYDDERDIYHCPYCNLCRVGKGLG 894
            KMMCM+CL +QPVG TCST SC+  SMAK++C IC+ +DDER+IYHCPYCNLCRVGKGLG
Sbjct: 1092 KMMCMRCLVIQPVGPTCSTASCDNLSMAKYYCRICKFFDDEREIYHCPYCNLCRVGKGLG 1151

Query: 895  VDYFHCMNCNACMSMSLAAHICREKCFESNCPICHEYIFTSSSPVKCLPCGHLMHSTCFQ 1074
            +DYFHCMNCNACMS SL+ HICREK  E NCPICHE+IFTSSSPVK LPCGHLMHS CFQ
Sbjct: 1152 IDYFHCMNCNACMSRSLSVHICREKWMEDNCPICHEFIFTSSSPVKALPCGHLMHSACFQ 1211

Query: 1075 DHTCMHYTCPICSKSLGDMQVYFRMLDALLAEEKSPEEYFGQTQVILCNDCEKRGVAPFH 1254
            D+TC HYTCPICSKSLGDMQVYF MLDALLAEEK P+EY  QTQ+ILCNDCEKRG A FH
Sbjct: 1212 DYTCTHYTCPICSKSLGDMQVYFGMLDALLAEEKIPDEYSTQTQMILCNDCEKRGTAAFH 1271

Query: 1255 WLYHKCSNCGSYNTRLL 1305
            WLYHKC  CGSYNTR++
Sbjct: 1272 WLYHKCPYCGSYNTRVI 1288


>ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802706 [Glycine max]
          Length = 1262

 Score =  548 bits (1413), Expect = e-153
 Identities = 257/437 (58%), Positives = 326/437 (74%), Gaps = 2/437 (0%)
 Frame = +1

Query: 1    HNISIVAEEPDILPLQSVDPLEIIATYLDKKDYHDLDGSELSSKRLTFQSQESFGADFEI 180
            ++++ V E  ++ PLQ V+PLEII+ YL ++   +L     ++K + F  ++  G +  +
Sbjct: 829  YSLTKVTEGSNVAPLQPVEPLEIISKYLSEEILDELQEESSANKSINFLQKDHNGDNVVL 888

Query: 181  SGDSDGDDKMKNLLADVDTNQCSELTELQSDNHKQNIQKVVSVTEPVYRPGEHLSTSQKF 360
            S + + DDK+K   A+ + NQCS+LT    D++K    +V ++  PV   G++     K 
Sbjct: 889  S-NYNFDDKVKVHNAEQNNNQCSKLTNQFHDHNKHACNEVTNIINPVNNEGKYSQLCDKS 947

Query: 361  KHLEERILGMSQEDLEAAIRRVHRDATLDLQKKSFITQSLLTSRWTVTQQKPHQEVILSS 540
               + R+L +SQ+DLE  IRRV RD+ LD QKKS+I Q+LL SRW + QQ    E  + +
Sbjct: 948  GRYD-RLLKLSQDDLETVIRRVSRDSCLDPQKKSYIIQNLLMSRWIIRQQISSTEANIKN 1006

Query: 541  NDGEIPGQFPSYRDPLT--FGCKHYKRNCKVLAACCMQLFTCRYCHDDTADHAMDRKSTI 714
            ++ E PG+ PSYRDPL   +GCKHYKRNCK+ A CC QL TC +CH++ +DH++DRKS  
Sbjct: 1007 DELEFPGKHPSYRDPLKLIYGCKHYKRNCKLFAPCCNQLHTCIHCHNEESDHSVDRKSIT 1066

Query: 715  KMMCMKCLKVQPVGATCSTISCNGFSMAKFFCIICRLYDDERDIYHCPYCNLCRVGKGLG 894
            KMMCMKCL +QP+ ATCSTISCN  SMAK++C IC+L+DDER+IYHCPYCNLCRVGKGLG
Sbjct: 1067 KMMCMKCLVIQPISATCSTISCN-LSMAKYYCRICKLFDDEREIYHCPYCNLCRVGKGLG 1125

Query: 895  VDYFHCMNCNACMSMSLAAHICREKCFESNCPICHEYIFTSSSPVKCLPCGHLMHSTCFQ 1074
            VDYFHCMNCNACMS SL  H CREK  E NCPICHEYIFTS SPVK LPCGH+MHSTCFQ
Sbjct: 1126 VDYFHCMNCNACMSRSLMTHTCREKHLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFQ 1185

Query: 1075 DHTCMHYTCPICSKSLGDMQVYFRMLDALLAEEKSPEEYFGQTQVILCNDCEKRGVAPFH 1254
            ++TC +YTCPICSKSLGDMQVYFRMLDALLAEE+  +E   QTQV+LCNDCEK+G  PFH
Sbjct: 1186 EYTCFNYTCPICSKSLGDMQVYFRMLDALLAEERISDEISSQTQVLLCNDCEKKGETPFH 1245

Query: 1255 WLYHKCSNCGSYNTRLL 1305
            WLYHKC +CGSYNTR+L
Sbjct: 1246 WLYHKCPSCGSYNTRVL 1262


>ref|XP_002511501.1| zinc finger protein, putative [Ricinus communis]
            gi|223550616|gb|EEF52103.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 1268

 Score =  544 bits (1401), Expect = e-152
 Identities = 257/437 (58%), Positives = 318/437 (72%), Gaps = 2/437 (0%)
 Frame = +1

Query: 1    HNISIVAEEPDILPLQSVDPLEIIATYLDKKDYHDLDGSELSSKRLTFQSQESFGADFEI 180
            ++I+ V+EE + +  ++ DPLEII++YL K         +   K + F  ++S GA+ ++
Sbjct: 841  YDIAHVSEESNTV--RAADPLEIISSYLPKDALR-----KQGDKGIEFSQKDSSGANIDL 893

Query: 181  SGDSDGDDKMKNLLADVDTNQCSELTELQSDNHKQNIQKVVSVTEPVYRPGEHLSTSQKF 360
             G  + +DK K    D   N+ SE  +  ++  K+   +V +       PGE    S   
Sbjct: 894  FGKCNLEDKAKAANED-QNNEYSECAKSLNEGEKKRFNEVANELLKTDIPGEPFQPSPNT 952

Query: 361  KHLEERILGMSQEDLEAAIRRVHRDATLDLQKKSFITQSLLTSRWTVTQQKPHQEVILSS 540
             H  E +L MSQ+DLE+A+RRV RD++LD QKKS+I Q+LL SRW V Q+  H +  +SS
Sbjct: 953  GH-HEHLLTMSQDDLESAVRRVSRDSSLDPQKKSYIIQNLLMSRWIVKQRISHTKETISS 1011

Query: 541  NDGEIPGQFPSYRDPL--TFGCKHYKRNCKVLAACCMQLFTCRYCHDDTADHAMDRKSTI 714
            N  +IPGQ+PSYRD L    GCKHYKRNCK+  ACC +L+TC  CHD+ ADH  DRK   
Sbjct: 1012 NGEDIPGQYPSYRDRLKVNLGCKHYKRNCKLFTACCNKLYTCIRCHDEEADHTTDRKGIT 1071

Query: 715  KMMCMKCLKVQPVGATCSTISCNGFSMAKFFCIICRLYDDERDIYHCPYCNLCRVGKGLG 894
            KMMCMKCL +QP+G  CS+ SCN  SMAK++C IC+L+DD+R+IYHCPYCNLCRVGKGLG
Sbjct: 1072 KMMCMKCLAIQPIGKACSSPSCNNLSMAKYYCSICKLFDDDREIYHCPYCNLCRVGKGLG 1131

Query: 895  VDYFHCMNCNACMSMSLAAHICREKCFESNCPICHEYIFTSSSPVKCLPCGHLMHSTCFQ 1074
            +DYFHCMNCNACMS SL  H+CREKC E NCPICHEYIFTSS+PVK LPCGHLMHSTCFQ
Sbjct: 1132 IDYFHCMNCNACMSKSLLVHVCREKCLEGNCPICHEYIFTSSNPVKALPCGHLMHSTCFQ 1191

Query: 1075 DHTCMHYTCPICSKSLGDMQVYFRMLDALLAEEKSPEEYFGQTQVILCNDCEKRGVAPFH 1254
            ++TC HY CPICSKSLGDMQVYF+MLDALLAEEK P+EY G+TQVILCNDCEK+G A FH
Sbjct: 1192 EYTCTHYICPICSKSLGDMQVYFKMLDALLAEEKMPDEYSGKTQVILCNDCEKKGPAAFH 1251

Query: 1255 WLYHKCSNCGSYNTRLL 1305
            W YHKC  C SYNTRLL
Sbjct: 1252 WHYHKCPFCDSYNTRLL 1268


>emb|CBI15292.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  525 bits (1353), Expect = e-146
 Identities = 235/308 (76%), Positives = 261/308 (84%), Gaps = 2/308 (0%)
 Frame = +1

Query: 388  MSQEDLEAAIRRVHRDATLDLQKKSFITQSLLTSRWTVTQQKPHQEVILSSNDGEIPGQF 567
            MSQ+DLEAAIRRV RD++LD QKKS I Q+LL SRW V QQK H EV +  +  EIPGQ 
Sbjct: 1    MSQDDLEAAIRRVSRDSSLDPQKKSHIIQNLLMSRWIVRQQKSHSEVAVLGSGKEIPGQC 60

Query: 568  PSYRDPL--TFGCKHYKRNCKVLAACCMQLFTCRYCHDDTADHAMDRKSTIKMMCMKCLK 741
            PSYRDPL  TFGCKHYKRNCK++AACC QL+ CR CHDD  DH+MDRK T KMMCM+CL 
Sbjct: 61   PSYRDPLKLTFGCKHYKRNCKLVAACCNQLYACRLCHDDVTDHSMDRKKTTKMMCMRCLV 120

Query: 742  VQPVGATCSTISCNGFSMAKFFCIICRLYDDERDIYHCPYCNLCRVGKGLGVDYFHCMNC 921
            +QPVG TCST SC+  SMAK++C IC+ +DDER+IYHCPYCNLCRVGKGLG+DYFHCMNC
Sbjct: 121  IQPVGPTCSTASCDNLSMAKYYCRICKFFDDEREIYHCPYCNLCRVGKGLGIDYFHCMNC 180

Query: 922  NACMSMSLAAHICREKCFESNCPICHEYIFTSSSPVKCLPCGHLMHSTCFQDHTCMHYTC 1101
            NACMS SL+ HICREK  E NCPICHE+IFTSSSPVK LPCGHLMHS CFQD+TC HYTC
Sbjct: 181  NACMSRSLSVHICREKWMEDNCPICHEFIFTSSSPVKALPCGHLMHSACFQDYTCTHYTC 240

Query: 1102 PICSKSLGDMQVYFRMLDALLAEEKSPEEYFGQTQVILCNDCEKRGVAPFHWLYHKCSNC 1281
            PICSKSLGDMQVYF MLDALLAEEK P+EY  QTQ+ILCNDCEKRG A FHWLYHKC  C
Sbjct: 241  PICSKSLGDMQVYFGMLDALLAEEKIPDEYSTQTQMILCNDCEKRGTAAFHWLYHKCPYC 300

Query: 1282 GSYNTRLL 1305
            GSYNTR++
Sbjct: 301  GSYNTRVI 308


>ref|XP_002322131.1| predicted protein [Populus trichocarpa] gi|222869127|gb|EEF06258.1|
            predicted protein [Populus trichocarpa]
          Length = 1189

 Score =  514 bits (1325), Expect = e-143
 Identities = 233/341 (68%), Positives = 278/341 (81%), Gaps = 4/341 (1%)
 Frame = +1

Query: 295  KVVSVTEPVYRPGEHLSTSQKFKHLEERILGMSQEDLEAAIRRVHRDATLDLQKKSFITQ 474
            +V ++T    +PG+    + K K+  ER+L MSQ+D+EAAIRRV R+++LD QKKSFI Q
Sbjct: 851  EVSNLTNKTDKPGQPFQLTLKSKY-HERLLKMSQDDMEAAIRRVSRESSLDHQKKSFIIQ 909

Query: 475  SLLTSRWTVTQQKPHQEVILSSNDGE-IPGQFPSYRD---PLTFGCKHYKRNCKVLAACC 642
            +L+ SRW V Q+  H EV +SSN GE IPGQ PSYRD   P+  GCKHYKRNCK++  CC
Sbjct: 910  NLIMSRWIVHQKISHTEVTISSNGGEEIPGQHPSYRDSPEPI-LGCKHYKRNCKLVMPCC 968

Query: 643  MQLFTCRYCHDDTADHAMDRKSTIKMMCMKCLKVQPVGATCSTISCNGFSMAKFFCIICR 822
             +++TC  CHD+ ADH+ DR++  KMMCMKCL +QP+G TCST+SCN  SM +++C IC+
Sbjct: 969  NKIYTCIRCHDELADHSTDRRAITKMMCMKCLIIQPIGETCSTVSCNNLSMGRYYCRICK 1028

Query: 823  LYDDERDIYHCPYCNLCRVGKGLGVDYFHCMNCNACMSMSLAAHICREKCFESNCPICHE 1002
            L DDER+IYHCPYCNLCRVGKGLG+DYFHCMNCNACM+ SL+ H+CREKC E NCPICHE
Sbjct: 1029 LLDDEREIYHCPYCNLCRVGKGLGIDYFHCMNCNACMARSLSVHVCREKCLEDNCPICHE 1088

Query: 1003 YIFTSSSPVKCLPCGHLMHSTCFQDHTCMHYTCPICSKSLGDMQVYFRMLDALLAEEKSP 1182
            YIFTSS+PVK L CGHLMHSTCFQ++TC HYTCPICSKSLGDMQVYF+MLDALLAEEK P
Sbjct: 1089 YIFTSSTPVKALYCGHLMHSTCFQEYTCTHYTCPICSKSLGDMQVYFQMLDALLAEEKIP 1148

Query: 1183 EEYFGQTQVILCNDCEKRGVAPFHWLYHKCSNCGSYNTRLL 1305
            +EY GQTQ ILCNDCEK+G A FHWLY KC  CGSYNTRLL
Sbjct: 1149 DEYSGQTQFILCNDCEKKGAARFHWLYRKCPYCGSYNTRLL 1189


Top