BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004735
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   283   2e-74
ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group] g...   273   1e-71
ref|XP_002528588.1| brix domain containing protein, putative [Ri...   269   2e-70
ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homo...   267   7e-70
ref|XP_002441350.1| hypothetical protein SORBIDRAFT_09g024910 [S...   267   9e-70

>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
           gi|297740066|emb|CBI30248.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  283 bits (723), Expect = 2e-74
 Identities = 135/184 (73%), Positives = 159/184 (86%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   KAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKYSRKNDNIRPF 178
           KAKRE++KRAPKLVE+GKKTLIL   KTSN+LN VLTEI+HLK+ SA++Y+RKN+NIRPF
Sbjct: 11  KAKREIEKRAPKLVESGKKTLILQGTKTSNVLNAVLTEIYHLKKDSAVRYTRKNENIRPF 70

Query: 179 ENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVGVENFRSMNSY 358
           E+GGETSLEFFS KTDCS+FVFGSHSKKRPDNLV+GRTYDHH+YDLVEVGVENF+SM S+
Sbjct: 71  ESGGETSLEFFSLKTDCSIFVFGSHSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMESF 130

Query: 359 SYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCT 538
           +YDKK++PKVG+KPF AFIGEGF              DL RGEV+ENLNLAG+D  ++CT
Sbjct: 131 TYDKKLSPKVGSKPFIAFIGEGFESVDELKHLKEVLLDLLRGEVVENLNLAGLDHAYICT 190

Query: 539 AVSS 550
           AVSS
Sbjct: 191 AVSS 194


>ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group]
           gi|18202717|sp|Q9AWM9.1|RPF2_ORYSJ RecName:
           Full=Ribosome production factor 2 homolog; AltName:
           Full=Brix domain-containing protein 1 homolog; AltName:
           Full=Ribosome biogenesis protein RPF2 homolog
           gi|13161376|dbj|BAB32971.1| brix domain containing
           protein 1 (33.5 kD)-like protein [Oryza sativa Japonica
           Group] gi|113532716|dbj|BAF05099.1| Os01g0513800 [Oryza
           sativa Japonica Group] gi|125526163|gb|EAY74277.1|
           hypothetical protein OsI_02165 [Oryza sativa Indica
           Group] gi|125570593|gb|EAZ12108.1| hypothetical protein
           OsJ_01990 [Oryza sativa Japonica Group]
           gi|215704732|dbj|BAG94760.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 310

 Score =  273 bits (699), Expect = 1e-71
 Identities = 134/183 (73%), Positives = 155/183 (84%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   KAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKYSRKNDNIRPF 178
           +AKREL K APKLVE GKKTLIL   KTS +LN+VL ++FHLKR +A+KYS+KNDNIRPF
Sbjct: 12  RAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKKNDNIRPF 71

Query: 179 ENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVGVENFRSMNSY 358
           E+GGETSLEFFS KTDCSL V+GSHSKKRP+NLVLGRTYDHH+YDLVEVGVEN++S+ SY
Sbjct: 72  ESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVENYKSIESY 131

Query: 359 SYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCT 538
            YDKK+APK+G+KPFFAFIGE F              DLF+GEV+ENLNLAGVDRVFVCT
Sbjct: 132 VYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGVDRVFVCT 191

Query: 539 AVS 547
           A+S
Sbjct: 192 AIS 194


>ref|XP_002528588.1| brix domain containing protein, putative [Ricinus communis]
           gi|223531984|gb|EEF33796.1| brix domain containing
           protein, putative [Ricinus communis]
          Length = 315

 Score =  269 bits (688), Expect = 2e-70
 Identities = 129/184 (70%), Positives = 154/184 (83%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   KAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKYSRKNDNIRPF 178
           + KR L+KRAPKLVE GKKTLIL   KTS++LN+VLT+I+HLK+ SAI+Y+RKNDNIRPF
Sbjct: 11  RIKRALEKRAPKLVETGKKTLILEGTKTSSVLNSVLTDIYHLKKESAIRYTRKNDNIRPF 70

Query: 179 ENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVGVENFRSMNSY 358
           E+GGETSLEFFS+KTDCS+FV+GS SKKRPDNLV+GRTYDHH+YDLVEVG+ENF+SM+S+
Sbjct: 71  ESGGETSLEFFSEKTDCSIFVYGSTSKKRPDNLVIGRTYDHHIYDLVEVGIENFKSMSSF 130

Query: 359 SYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCT 538
            YDKK AP VG+KPF AF+GEGF              DL RGE +ENLNLAG+DR +VCT
Sbjct: 131 KYDKKAAPHVGSKPFIAFVGEGFESVDELKHLKEVLLDLLRGEAVENLNLAGLDRAYVCT 190

Query: 539 AVSS 550
           A SS
Sbjct: 191 ATSS 194


>ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  267 bits (683), Expect = 7e-70
 Identities = 128/183 (69%), Positives = 150/183 (81%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   KAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKYSRKNDNIRPF 178
           K KREL+KRAPKLVE+GKKTLIL   KTS +LN VL +I+HLK+  A+KYSR+N+N++PF
Sbjct: 11  KGKRELEKRAPKLVESGKKTLILHGTKTSGVLNAVLAQIYHLKKDCAVKYSRRNENVKPF 70

Query: 179 ENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVGVENFRSMNSY 358
           E GGETSLEFFS KTDCS+FV+GSHSKKRPDNLV+GRTYDHH+YDLVEVGVENF+ M S+
Sbjct: 71  EAGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRTYDHHIYDLVEVGVENFKPMESF 130

Query: 359 SYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCT 538
           SYDKK+APK G+KPF  FIGEGF              DL RGEV+ENLNLAGVDR +VC 
Sbjct: 131 SYDKKLAPKEGSKPFIVFIGEGFEAVEELKHLKEVLLDLLRGEVVENLNLAGVDRAYVCA 190

Query: 539 AVS 547
           A+S
Sbjct: 191 ALS 193


>ref|XP_002441350.1| hypothetical protein SORBIDRAFT_09g024910 [Sorghum bicolor]
           gi|241946635|gb|EES19780.1| hypothetical protein
           SORBIDRAFT_09g024910 [Sorghum bicolor]
          Length = 310

 Score =  267 bits (682), Expect = 9e-70
 Identities = 128/183 (69%), Positives = 155/183 (84%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   KAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKYSRKNDNIRPF 178
           +A+REL K APKLVE  KKTLIL   KTS +LN+VL++I+HLKR +A+KY++KNDNIRPF
Sbjct: 12  RARRELLKHAPKLVETSKKTLILHGTKTSAVLNSVLSDIYHLKRDNAVKYTKKNDNIRPF 71

Query: 179 ENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVGVENFRSMNSY 358
           E+GGE+SLEFFS KTDCSL V+GSHSKKRP+NL+LGRTYDHH+YDLVEVGVEN++SM SY
Sbjct: 72  ESGGESSLEFFSLKTDCSLIVYGSHSKKRPNNLILGRTYDHHIYDLVEVGVENYKSMESY 131

Query: 359 SYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCT 538
            YDKK+APK+G+KPFFAFIGE F              DLF+GEV+ENLNLAGVDR++VCT
Sbjct: 132 VYDKKLAPKLGSKPFFAFIGEHFESAEELKHLKEVLLDLFKGEVVENLNLAGVDRIYVCT 191

Query: 539 AVS 547
           A+S
Sbjct: 192 AIS 194