BLASTX nr result

ID: Coptis24_contig00004731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004731
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265615.1| PREDICTED: uncharacterized protein LOC100264...    55   2e-08
emb|CBI35075.3| unnamed protein product [Vitis vinifera]               55   2e-08
ref|XP_002529984.1| hypothetical protein RCOM_1264330 [Ricinus c...    57   1e-06
ref|XP_003523948.1| PREDICTED: uncharacterized protein LOC100785...    56   3e-06
emb|CAN75675.1| hypothetical protein VITISV_013266 [Vitis vinifera]    55   5e-06

>ref|XP_002265615.1| PREDICTED: uncharacterized protein LOC100264272 [Vitis vinifera]
          Length = 413

 Score = 55.5 bits (132), Expect(2) = 2e-08
 Identities = 25/39 (64%), Positives = 34/39 (87%)
 Frame = -2

Query: 201 TMEENALQELEVAMTQLTQETRICFRDALYRLARSSEQL 85
           ++EE+ L ELEV M QL ++TRICFRDAL+RLA++SE+L
Sbjct: 243 SLEESVLHELEVVMEQLPEKTRICFRDALFRLAKNSERL 281



 Score = 27.7 bits (60), Expect(2) = 2e-08
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
 Frame = -1

Query: 493 LKDVDMDSQSIPKDQWRREDLKYLEVPS---SMDWDKLD------GPSTSISYDSEKEKG 341
           ++D+ +DSQSI  +  R    KYL+  +   S+DWD  +       P  S+  D    K 
Sbjct: 161 MEDMILDSQSISSNLHRMGSSKYLKTHAFSPSVDWDSEEVTTLCHNPCNSVQKDCPPVKA 220

Query: 340 SLSRNALGSETN 305
            + +  + S  N
Sbjct: 221 PMIKFLVPSGPN 232


>emb|CBI35075.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score = 55.5 bits (132), Expect(2) = 2e-08
 Identities = 25/39 (64%), Positives = 34/39 (87%)
 Frame = -2

Query: 201 TMEENALQELEVAMTQLTQETRICFRDALYRLARSSEQL 85
           ++EE+ L ELEV M QL ++TRICFRDAL+RLA++SE+L
Sbjct: 125 SLEESVLHELEVVMEQLPEKTRICFRDALFRLAKNSERL 163



 Score = 27.7 bits (60), Expect(2) = 2e-08
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
 Frame = -1

Query: 493 LKDVDMDSQSIPKDQWRREDLKYLEVPS---SMDWDKLD------GPSTSISYDSEKEKG 341
           ++D+ +DSQSI  +  R    KYL+  +   S+DWD  +       P  S+  D    K 
Sbjct: 43  MEDMILDSQSISSNLHRMGSSKYLKTHAFSPSVDWDSEEVTTLCHNPCNSVQKDCPPVKA 102

Query: 340 SLSRNALGSETN 305
            + +  + S  N
Sbjct: 103 PMIKFLVPSGPN 114


>ref|XP_002529984.1| hypothetical protein RCOM_1264330 [Ricinus communis]
           gi|223530507|gb|EEF32389.1| hypothetical protein
           RCOM_1264330 [Ricinus communis]
          Length = 365

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = -2

Query: 201 TMEENALQELEVAMTQLTQETRICFRDALYRLARSSEQ 88
           ++EE+ LQE+E+ M+QLT +TRICFRDALYRLA++S Q
Sbjct: 211 SLEESVLQEMEMVMSQLTDKTRICFRDALYRLAKNSRQ 248


>ref|XP_003523948.1| PREDICTED: uncharacterized protein LOC100785636 [Glycine max]
          Length = 372

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 8/70 (11%)
 Frame = -2

Query: 201 TMEENALQELEVAMTQLTQETRICFRDALYRLARSSEQLH--------LKDEKRIVKHTI 46
           ++EE  L++LE+ + Q T+ TRICFRDALYRLAR++E+ H        L  +K I     
Sbjct: 197 SLEEFILKDLEMVIGQFTERTRICFRDALYRLARNTEEQHVMLDQNEDLNIQKAIPHTDH 256

Query: 45  NETAGSNDQR 16
           NET  S D++
Sbjct: 257 NETMRSQDKK 266


>emb|CAN75675.1| hypothetical protein VITISV_013266 [Vitis vinifera]
          Length = 558

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 34/39 (87%)
 Frame = -2

Query: 201 TMEENALQELEVAMTQLTQETRICFRDALYRLARSSEQL 85
           ++EE+ L ELEV M QL ++TRICFRDAL+RLA++SE+L
Sbjct: 316 SLEESVLHELEVVMEQLPEKTRICFRDALFRLAKNSERL 354


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