BLASTX nr result

ID: Coptis24_contig00004727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004727
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536964.1| PREDICTED: uncharacterized protein LOC100797...   118   2e-35
ref|XP_003554336.1| PREDICTED: uncharacterized protein LOC100786...   119   2e-24
ref|XP_002873063.1| heavy-metal-associated domain-containing pro...   119   2e-24
emb|CAB85997.1| putative protein [Arabidopsis thaliana]               119   2e-24
ref|NP_568105.1| heavy metal transport/detoxification domain-con...   119   2e-24

>ref|XP_003536964.1| PREDICTED: uncharacterized protein LOC100797952 [Glycine max]
          Length = 279

 Score =  118 bits (296), Expect(2) = 2e-35
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = +1

Query: 670 QVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVTVTGDVTPLGVLTSISRVKN 849
           QVVVLRVSLHCKGCEGKVRKH+S+M+GVTSFNIDFA KKVTV GDVTPL VL SIS+VKN
Sbjct: 195 QVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKN 254

Query: 850 AQFWP 864
           AQ WP
Sbjct: 255 AQLWP 259



 Score = 58.2 bits (139), Expect(2) = 2e-35
 Identities = 55/207 (26%), Positives = 77/207 (37%), Gaps = 24/207 (11%)
 Frame = +2

Query: 71  MKGIDLFCSSPASTAICVSTDQRSMIRHG----GSRAIDRHNPHLRDGQRSRTATTTTIN 238
           MK ID+FC+S ASTAIC+S +Q S         G R +DRHNP + D +RS + + T   
Sbjct: 1   MKRIDMFCASQASTAICLSMEQASCSSSNSILLGGRTMDRHNPIINDSRRSTSKSLTAPC 60

Query: 239 HLTQLXXXXXXXXXXXXAKPXXXXXXXXXXXXXXXXXXXXXXXXANDLQTTS-------- 394
             +Q             AK                            +  TS        
Sbjct: 61  SSSQSPINPKPYHELHKAKKNSSSKNAAKGHDNHHQKKSTAEKLTEHVTNTSKPVDGIVR 120

Query: 395 ------------PTGSSRYLLSDTPFLDVLTEFEPLPSSSLFRNESTRFPSVKSDCYPTF 538
                       P GS+R LLSDT  LD  ++F+P+ + +   N  T     + +  P  
Sbjct: 121 RGWLKPPANLITPPGSTRSLLSDTALLDGSSDFDPVLALTTTVNNKTSQVGHQDEANPVS 180

Query: 539 QPPXXXXXXXXXXXXXXNDHQVVVLRV 619
           +                +  QVVVLRV
Sbjct: 181 K------LSSSSHPKSGSSDQVVVLRV 201


>ref|XP_003554336.1| PREDICTED: uncharacterized protein LOC100786319 [Glycine max]
          Length = 290

 Score =  119 bits (297), Expect = 2e-24
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = +1

Query: 670 QVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVTVTGDVTPLGVLTSISRVKN 849
           QVV LRVSLHCKGCEGKVRKH+S+M+GVTSFNIDFA KKVTV GDVTPL VL SIS+VKN
Sbjct: 210 QVVELRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKN 269

Query: 850 AQFWP 864
           AQFWP
Sbjct: 270 AQFWP 274


>ref|XP_002873063.1| heavy-metal-associated domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297318900|gb|EFH49322.1|
           heavy-metal-associated domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 319

 Score =  119 bits (297), Expect = 2e-24
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = +1

Query: 670 QVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVTVTGDVTPLGVLTSISRVKN 849
           QVVVLRVSLHCKGC GKV+KH+SK+KGVTS+NIDFA KKVTVTGDVTPL VL SIS+VKN
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 850 AQFWP 864
           AQFWP
Sbjct: 310 AQFWP 314


>emb|CAB85997.1| putative protein [Arabidopsis thaliana]
          Length = 304

 Score =  119 bits (297), Expect = 2e-24
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = +1

Query: 670 QVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVTVTGDVTPLGVLTSISRVKN 849
           QVVVLRVSLHCKGC GKV+KH+SK+KGVTS+NIDFA KKVTVTGDVTPL VL SIS+VKN
Sbjct: 235 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 294

Query: 850 AQFWP 864
           AQFWP
Sbjct: 295 AQFWP 299


>ref|NP_568105.1| heavy metal transport/detoxification domain-containing protein
           [Arabidopsis thaliana] gi|42573253|ref|NP_974723.1|
           heavy metal transport/detoxification domain-containing
           protein [Arabidopsis thaliana]
           gi|21553967|gb|AAM63048.1| unknown [Arabidopsis
           thaliana] gi|26449554|dbj|BAC41903.1| unknown protein
           [Arabidopsis thaliana] gi|30725362|gb|AAP37703.1|
           At5g02600 [Arabidopsis thaliana]
           gi|62320791|dbj|BAD93718.1| hypothetical protein
           [Arabidopsis thaliana] gi|332003112|gb|AED90495.1| heavy
           metal transport/detoxification domain-containing protein
           [Arabidopsis thaliana] gi|332003113|gb|AED90496.1| heavy
           metal transport/detoxification domain-containing protein
           [Arabidopsis thaliana]
          Length = 319

 Score =  119 bits (297), Expect = 2e-24
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = +1

Query: 670 QVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVTVTGDVTPLGVLTSISRVKN 849
           QVVVLRVSLHCKGC GKV+KH+SK+KGVTS+NIDFA KKVTVTGDVTPL VL SIS+VKN
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 850 AQFWP 864
           AQFWP
Sbjct: 310 AQFWP 314


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