BLASTX nr result

ID: Coptis24_contig00004723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004723
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054446.1| Os05g0111200 [Oryza sativa Japonica Group] g...   100   4e-19
gb|EEC72263.1| hypothetical protein OsI_05414 [Oryza sativa Indi...    99   1e-18
ref|XP_003569082.1| PREDICTED: uncharacterized protein LOC100845...    96   1e-17
emb|CAA63967.1| pom14 [Solanum tuberosum]                              94   3e-17
ref|XP_002457029.1| hypothetical protein SORBIDRAFT_03g047420 [S...    94   4e-17

>ref|NP_001054446.1| Os05g0111200 [Oryza sativa Japonica Group]
           gi|52353640|gb|AAU44206.1| putative amino acid selective
           channel protein [Oryza sativa Japonica Group]
           gi|113577997|dbj|BAF16360.1| Os05g0111200 [Oryza sativa
           Japonica Group] gi|215678754|dbj|BAG95191.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218195962|gb|EEC78389.1| hypothetical protein
           OsI_18168 [Oryza sativa Indica Group]
           gi|222629946|gb|EEE62078.1| hypothetical protein
           OsJ_16862 [Oryza sativa Japonica Group]
          Length = 146

 Score =  100 bits (248), Expect = 4e-19
 Identities = 53/126 (42%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
 Frame = +1

Query: 145 NMGLVIVNRIIDAVLIFXXXXXXXXXXXXXYKC--RGHVSKNKLKPLFQKMCSEGAYWXX 318
           +MG   +NR +D  L               + C  RG VSK+KL+ + +KMC EGAYW  
Sbjct: 20  DMGNPFLNRTVDGFLKIGAVGACKVAAEDTFDCLHRGDVSKHKLEHMLKKMCKEGAYWGT 79

Query: 319 XXXXXXXXXXXXXIILSAGDWKNAMLRGVLTGALVSAAYNNGKDKVVQNAVTGGAIATAA 498
                         I    DWKNAM+ G L+GAL+SAA NN KDK++++A+TGGA+ATA 
Sbjct: 80  VAGVYVGMEYGVERIRGRHDWKNAMIGGALSGALISAASNNHKDKIIKDAITGGAVATAV 139

Query: 499 ELLCYL 516
           E + YL
Sbjct: 140 EFINYL 145


>gb|EEC72263.1| hypothetical protein OsI_05414 [Oryza sativa Indica Group]
          Length = 146

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 60/142 (42%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
 Frame = +1

Query: 109 SKYSGIFTSS----TSNMGLVIVNRIIDAVLIFXXXXXXXXXXXXXYKC--RGHVSKNKL 270
           S +SG  TS       +MG   +NR +D  L               ++C  RG VSK+K+
Sbjct: 4   SGFSGSLTSPRFDLAVDMGHPFLNRTVDGFLKIGAVGACKVAAEETFECLHRGDVSKHKV 63

Query: 271 KPLFQKMCSEGAYWXXXXXXXXXXXXXXXIILSAGDWKNAMLRGVLTGALVSAAYNNGKD 450
           +   +KMC EGAYW                I    DWKNAM+ G +TGALVSAA N+ + 
Sbjct: 64  ESALKKMCKEGAYWGTIAGVYVGMEYGIERIRGHRDWKNAMVGGAVTGALVSAASNSHRQ 123

Query: 451 KVVQNAVTGGAIATAAELLCYL 516
            VV+NA+TGGAIATAAE L YL
Sbjct: 124 NVVKNAITGGAIATAAEFLNYL 145


>ref|XP_003569082.1| PREDICTED: uncharacterized protein LOC100845187 [Brachypodium
           distachyon]
          Length = 144

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = +1

Query: 151 GLVIVNRIIDAVLIFXXXXXXXXXXXXXYKC--RGHVSKNKLKPLFQKMCSEGAYWXXXX 324
           G  ++NR +D  +               ++C  +G+VS NKL+   +KMC EGAYW    
Sbjct: 20  GNPLLNRTLDGFIKIGAVGACKVAAEDAFECLHKGNVSTNKLEHTLKKMCKEGAYWGTVA 79

Query: 325 XXXXXXXXXXXIILSAGDWKNAMLRGVLTGALVSAAYNNGKDKVVQNAVTGGAIATAAEL 504
                       I    DWKNA++ GV++GAL+SAA N+ +DK+V++A+TGGAIATAAE 
Sbjct: 80  GVYVGMEYGVERIRGRSDWKNALIGGVVSGALISAASNSHRDKIVKDAITGGAIATAAEF 139

Query: 505 LCYL 516
           + YL
Sbjct: 140 INYL 143


>emb|CAA63967.1| pom14 [Solanum tuberosum]
          Length = 146

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 52/126 (41%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
 Frame = +1

Query: 145 NMGLVIVNRIIDAVLIFXXXXXXXXXXXXXYKC--RGHVSKNKLKPLFQKMCSEGAYWXX 318
           +MG   +N  +DA L               Y    RG VS +  +   +KMC EGAYW  
Sbjct: 20  DMGNPFLNHTVDAFLNIGTVAATKTVAEETYGMVTRGSVSSHNFEKSLKKMCKEGAYWGT 79

Query: 319 XXXXXXXXXXXXXIILSAGDWKNAMLRGVLTGALVSAAYNNGKDKVVQNAVTGGAIATAA 498
                         I    DWKNAM+ G LTGAL+SAA NN +DK+V +A+TGGA+ATA+
Sbjct: 80  VAGVYAGMEYGAERIRGTNDWKNAMIGGALTGALISAACNNNRDKIVMDAITGGAVATAS 139

Query: 499 ELLCYL 516
           E L YL
Sbjct: 140 EFLNYL 145


>ref|XP_002457029.1| hypothetical protein SORBIDRAFT_03g047420 [Sorghum bicolor]
           gi|241929004|gb|EES02149.1| hypothetical protein
           SORBIDRAFT_03g047420 [Sorghum bicolor]
          Length = 128

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 53/125 (42%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = +1

Query: 148 MGLVIVNRIIDAVLIFXXXXXXXXXXXXXYKC--RGHVSKNKLKPLFQKMCSEGAYWXXX 321
           MG   +NR +D  +               ++C  RG VSK+K++   +KMC EGAYW   
Sbjct: 1   MGHPFLNRTVDGFIRIGAVGGCKVAAEETFECLQRGDVSKHKVEHALKKMCKEGAYWGTV 60

Query: 322 XXXXXXXXXXXXIILSAGDWKNAMLRGVLTGALVSAAYNNGKDKVVQNAVTGGAIATAAE 501
                        I    DWKNAM+ G LTGALVSA  N+ +  VV+NA+TGGAIATAAE
Sbjct: 61  AGVYVGVEYGIQKIRGHRDWKNAMVGGALTGALVSAVNNHHRHNVVKNAITGGAIATAAE 120

Query: 502 LLCYL 516
            L +L
Sbjct: 121 FLTHL 125


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