BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004722
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis ...   126   2e-27
ref|XP_002525644.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_002311221.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002299809.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
gb|AAX47177.2| early flowering 4 [Pisum sativum]                      115   3e-24

>ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis vinifera]
           gi|297736609|emb|CBI25480.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/80 (76%), Positives = 69/80 (86%)
 Frame = +3

Query: 96  KTERGDVELWETFSKSFNQVQSVLDQNRVLIQQVNENHQSKLPDNLTKNVSLIREINGNI 275
           + E G  E+WETF+ SF QVQSVLD+NRVLIQQVNENHQSK+PDNL KNV+LI+EINGNI
Sbjct: 43  EAEEGSAEVWETFNDSFRQVQSVLDRNRVLIQQVNENHQSKIPDNLVKNVALIQEINGNI 102

Query: 276 STVVSLYSKLSANFTHVFHQ 335
           S VVSLYS LS NF+ VFHQ
Sbjct: 103 SKVVSLYSDLSTNFSGVFHQ 122


>ref|XP_002525644.1| conserved hypothetical protein [Ricinus communis]
           gi|223535080|gb|EEF36762.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/112 (57%), Positives = 83/112 (74%), Gaps = 9/112 (8%)
 Frame = +3

Query: 30  TTVESSSSSGCCMDT---------DYYSNKNKTERGDVELWETFSKSFNQVQSVLDQNRV 182
           TT  ++SS    +++         D Y N+++ E  DVE+W+T S+SF QVQ+VLDQNR 
Sbjct: 5   TTTTTTSSCATALNSVSKMNTKKRDGYENEDE-EECDVEVWDTLSRSFRQVQAVLDQNRD 63

Query: 183 LIQQVNENHQSKLPDNLTKNVSLIREINGNISTVVSLYSKLSANFTHVFHQR 338
           LI QVNENHQSK+PDNLTKN+SLIREINGNIS V+S+YS LS  F+++ HQR
Sbjct: 64  LINQVNENHQSKVPDNLTKNISLIREINGNISKVISIYSDLSLRFSNIVHQR 115


>ref|XP_002311221.1| predicted protein [Populus trichocarpa] gi|222851041|gb|EEE88588.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/109 (59%), Positives = 81/109 (74%), Gaps = 6/109 (5%)
 Frame = +3

Query: 30  TTVESSSSSGCCM-DTDYYS-----NKNKTERGDVELWETFSKSFNQVQSVLDQNRVLIQ 191
           TT++S S++   M DT   S     N NK +  D E+W TF+ SF QVQSVLD+NRVLIQ
Sbjct: 3   TTLDSFSAAESSMEDTSNPSITTNQNANKEDEVDAEVWATFNNSFRQVQSVLDRNRVLIQ 62

Query: 192 QVNENHQSKLPDNLTKNVSLIREINGNISTVVSLYSKLSANFTHVFHQR 338
           QVNENHQS+ PDN+ KNVSLI+E+NGNIS VV LYS L++NF+  +HQR
Sbjct: 63  QVNENHQSRTPDNMVKNVSLIQELNGNISKVVGLYSDLNSNFSTAYHQR 111


>ref|XP_002299809.1| predicted protein [Populus trichocarpa] gi|222847067|gb|EEE84614.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/84 (69%), Positives = 67/84 (79%)
 Frame = +3

Query: 87  NKNKTERGDVELWETFSKSFNQVQSVLDQNRVLIQQVNENHQSKLPDNLTKNVSLIREIN 266
           N  + E  DVE W+T SKSF QVQSVLD NR LIQQVN NHQSK+PDNL KNVSLIREIN
Sbjct: 14  NGEEEEECDVEAWDTLSKSFKQVQSVLDHNRDLIQQVNANHQSKIPDNLVKNVSLIREIN 73

Query: 267 GNISTVVSLYSKLSANFTHVFHQR 338
           GNIS V+S+YS LS NF+++  +R
Sbjct: 74  GNISKVMSIYSDLSVNFSNIVQER 97


>gb|AAX47177.2| early flowering 4 [Pisum sativum]
          Length = 135

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/94 (58%), Positives = 71/94 (75%)
 Frame = +3

Query: 81  YSNKNKTERGDVELWETFSKSFNQVQSVLDQNRVLIQQVNENHQSKLPDNLTKNVSLIRE 260
           YS+    E GD E W T +KSF QVQSVLD+NR +IQQVNEN QS++PDN+ KNVSLI+E
Sbjct: 41  YSDVEDAEDGDPEAWATLNKSFRQVQSVLDRNRAIIQQVNENQQSRMPDNMVKNVSLIQE 100

Query: 261 INGNISTVVSLYSKLSANFTHVFHQRAAAPAATG 362
           +NGNIS V SLYS L+++FT++ HQ+  +    G
Sbjct: 101 LNGNISKVASLYSDLNSDFTNICHQQQRSSHTRG 134