BLASTX nr result
ID: Coptis24_contig00004718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004718
(2122 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29708.3| unnamed protein product [Vitis vinifera] 355 3e-95
ref|XP_002263445.2| PREDICTED: uncharacterized protein LOC100254... 315 4e-83
ref|XP_003592925.1| Bromodomain-containing protein [Medicago tru... 272 3e-70
ref|XP_004135351.1| PREDICTED: uncharacterized protein LOC101220... 271 5e-70
ref|XP_002886720.1| hypothetical protein ARALYDRAFT_475449 [Arab... 244 7e-62
>emb|CBI29708.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 355 bits (911), Expect = 3e-95
Identities = 234/631 (37%), Positives = 326/631 (51%), Gaps = 37/631 (5%)
Frame = +1
Query: 106 DDDSVLEDLHNVEVES------------DEPAKIIHTHADGFTDRPS-----GRXXXXXX 234
+D+S L+D N E +S D+P K+ + + G D+P GR
Sbjct: 33 EDNSGLDDYDNAEFDSGMEVDTPSSTGTDQPDKVAYINPGGLIDKPVEKSGYGRVKVKLK 92
Query: 235 XXXXXEPHSDAHXXXXXXXXXXXXXHMSLEVVENNMYDGEDFLLADIQPTASAKYSRKTA 414
+ +V M D + + ++ S S+K
Sbjct: 93 TSKMLGSQLTSSTQSDTDKSSQQVGSEKQGIVSEKMEDSANSV-PGVKIAVSGNPSKKAG 151
Query: 415 SIKIKSSRGIATT-NQTSGPLHCQGDRIVTDDHKTIASSMSNDSHHKEHNLPRQDARYNK 591
SIKIKSSRG+ ++ +QTS + G+R SH KE LP + RY+K
Sbjct: 152 SIKIKSSRGLGSSVSQTSNAVPMHGER----------------SHQKEPKLPHRGPRYDK 195
Query: 592 QDLNTALAVIKKIMKMDAAEPFNAPVDPVALGIPDYFDIIEIPMDFGTICNNIEEGHIYK 771
++L AL VIKK+MKMDAAEPFN PV+PV LGIPDYFD+I+ PMDFGTI +N+E+G Y
Sbjct: 196 EELKAALVVIKKVMKMDAAEPFNVPVNPVELGIPDYFDVIDTPMDFGTIYDNLEKGVKYM 255
Query: 772 NSEDVFKDVQYIWENCYKYNNKGDYIVDLMRRVKKNFMKYWTAAGLYTRKSNVKGTLNGN 951
NSEDVFKDVQYIWENC+KYNNKGDYI++LM+RVKKNF KYWT+AGL++ +
Sbjct: 256 NSEDVFKDVQYIWENCHKYNNKGDYILELMKRVKKNFTKYWTSAGLHSEQP------RRM 309
Query: 952 TDDAPGQYSRKE-VPVEDDQGKERIFVGKGRMSDIM-SKKENGQPLSLNASARLQMETAP 1125
D AP Q S E +P E +++ V GR +D++ SK+E + S+N +Q E
Sbjct: 310 NDAAPEQDSVLEGLPPEGPSVRDKAIVATGRKTDMLASKEEIVETSSINGFGSIQAEDFV 369
Query: 1126 LPSQERLHVKGTNAXXXXXXXXXXXXXXSDCLCAVCVMXXXXXXXXMNAKVVENRIEISD 1305
SQ ++H+K + +DCLCA+C+M A+V I SD
Sbjct: 370 PSSQGKIHIKSSQLKNKKQKRQGVKRHKNDCLCAICIMKRRKRERLKMAQV----IRTSD 425
Query: 1306 GNVSKEFKQEET-PIENHCSEDASSNLGHSPETDADGDLEVQGEEMKLERLERHGSAQ-- 1476
GN S++FKQE T IE+ +D SSN+ +S + +AD DL +GEE+K E E+ S+Q
Sbjct: 426 GNQSQDFKQEGTFLIESPGDDDTSSNMDNSLDPEADADLIEKGEEVKSEAAEQQYSSQLE 485
Query: 1477 QGINEENAEMRKTVRNNYFNQYQLGHGSREEHNLQSQSEEMEDSSIMIQKHNR----KDD 1644
NE E+RK Q QLG + E+ N Q+ ++ E +I +K + +++
Sbjct: 486 NQENESENEIRKNGEGETSEQSQLGDRTGEDPNSQTPTQIAESGAIPKKKEEKSVQNEEE 545
Query: 1645 TPPPEESR----------XXXXXXXXXXXXXXXTLMSKNLHLNENPTIMELCGTLFPSNR 1794
E+ + T M K ENP ++ELCGTLFP+NR
Sbjct: 546 AAAAEQHKRKDLASGAVIYHEKKNYKDLLMDEKTKMYKEFLQAENPMLLELCGTLFPNNR 605
Query: 1795 KSAWSGPHSLVCHDLPVRRSSAIHEALEMFM 1887
SAWS PHSLV H R S++H A+ M
Sbjct: 606 SSAWSRPHSLVQHP-GSERGSSVHSAIATLM 635
>ref|XP_002263445.2| PREDICTED: uncharacterized protein LOC100254331 [Vitis vinifera]
Length = 636
Score = 315 bits (806), Expect = 4e-83
Identities = 226/647 (34%), Positives = 311/647 (48%), Gaps = 53/647 (8%)
Frame = +1
Query: 106 DDDSVLEDLHNVEVES------------DEPAKIIHTHADGFTDRPS-----GRXXXXXX 234
+D+S L+D N E +S D+P K+ + + G D+P GR
Sbjct: 33 EDNSGLDDYDNAEFDSGMEVDTPSSTGTDQPDKVAYINPGGLIDKPVEKSGYGRVKVKLK 92
Query: 235 XXXXXEPHSDAHXXXXXXXXXXXXXHMSLEVVENNMYDGEDFLLADIQPTASAKYSRKTA 414
+ +V M D + + ++ S S+K
Sbjct: 93 TSKMLGSQLTSSTQSDTDKSSQQVGSEKQGIVSEKMEDSANSV-PGVKIAVSGNPSKKAG 151
Query: 415 SIKIKSSRGIATT-NQTSGPLHCQGDRIVTDDHKTIASSMSNDSHHKEHNLPRQDARYNK 591
SIKIKSSRG+ ++ +QTS + G+R SH KE LP + RY+K
Sbjct: 152 SIKIKSSRGLGSSVSQTSNAVPMHGER----------------SHQKEPKLPHRGPRYDK 195
Query: 592 QDLNTALAVIKKIMKMDAAEPFNAPVDPVALGIPDYFDIIEIPMDFGTICNNIEEGHIYK 771
++L AL VIKK+MKMDAAEPFN PV+PV LGIPDYFD+I+ PMDFGTI +N+E+G Y
Sbjct: 196 EELKAALVVIKKVMKMDAAEPFNVPVNPVELGIPDYFDVIDTPMDFGTIYDNLEKGVKYM 255
Query: 772 NSEDVFKDVQYIWENCYKYNNKGDYIVDLMRRVKKNFMKYWTAAGLYTRKSNVKGTLNGN 951
NSEDVFKDVQYIWENC+KYNNKGDYI++LM+RVKKNF KYWT+AGL++ +
Sbjct: 256 NSEDVFKDVQYIWENCHKYNNKGDYILELMKRVKKNFTKYWTSAGLHSEQP------RRM 309
Query: 952 TDDAPGQYSRKE-VPVEDDQGKERIFVGKGRMSDIMSKKE--------NGQ--------- 1077
D AP Q S E +P E +++ V GR +D+++ KE N Q
Sbjct: 310 NDAAPEQDSVLEGLPPEGPSVRDKAIVATGRKTDMLASKEEIVETSSINAQQDWKNHRYT 369
Query: 1078 -PLSLN-ASARLQMET-APLPSQE--------RLHVKGTNA----XXXXXXXXXXXXXXS 1212
PLS N S +L E +P+P Q L V + + +
Sbjct: 370 IPLSKNCVSCKLGHEPGSPVPEQGVPACCAVLGLEVALSRSQKFHESKIMDSITVKRHKN 429
Query: 1213 DCLCAVCVMXXXXXXXXMNAKVVENRIEISDGNVSKEFKQEETPIENHCSEDASSNLGHS 1392
DCLCA+C+M A+V+ + D +D SSN+ +S
Sbjct: 430 DCLCAICIMKRRKRERLKMAQVIRTKSLHHDPG----------------DDDTSSNMDNS 473
Query: 1393 PETDADGDLEVQGEEMKLERLERHGSAQ--QGINEENAEMRKTVRNNYFNQYQLGHGSRE 1566
+ +AD DL +GEE+K E E+ S+Q NE E+RK Q QLG + E
Sbjct: 474 LDPEADADLIEKGEEVKSEAAEQQYSSQLENQENESENEIRKNGEGETSEQSQLGDRTGE 533
Query: 1567 EHNLQSQSEEMEDSSIMIQKHNRKDDTPPPEESRXXXXXXXXXXXXXXXTLMSKNLHLNE 1746
+ N Q+ ++ E +I +K + + T M K E
Sbjct: 534 DPNSQTPTQIAESGAI-----PKKKEEKSVQNEEEAAAAEQHKRKMDEKTKMYKEFLQAE 588
Query: 1747 NPTIMELCGTLFPSNRKSAWSGPHSLVCHDLPVRRSSAIHEALEMFM 1887
NP ++ELCGTLFP+NR SAWS PHSLV H R S++H A+ M
Sbjct: 589 NPMLLELCGTLFPNNRSSAWSRPHSLVQHP-GSERGSSVHSAIATLM 634
>ref|XP_003592925.1| Bromodomain-containing protein [Medicago truncatula]
gi|140053518|gb|ABE79573.2| Bromodomain [Medicago
truncatula] gi|355481973|gb|AES63176.1|
Bromodomain-containing protein [Medicago truncatula]
Length = 679
Score = 272 bits (695), Expect = 3e-70
Identities = 193/547 (35%), Positives = 264/547 (48%), Gaps = 29/547 (5%)
Frame = +1
Query: 403 RKTASIKIKSSRGIA-TTNQTSGPLHCQGDRIVTDDHKTIASSMSNDSHHKEHNLPRQDA 579
+K SIKIKSS+ + +QTS PL + I H KE +P +
Sbjct: 146 KKAGSIKIKSSKVLGLNADQTSKPLPISSEII----------------HPKERKMPPLNP 189
Query: 580 RYNKQDLNTALAVIKKIMKMDAAEPFNAPVDPVALGIPDYFDIIEIPMDFGTICNNIEEG 759
RYNK +L+T+L +I+K+MKMDAAEPFN PV+P ALGIPDYFDII+ PMDFGTIC+N+E+
Sbjct: 190 RYNKHELDTSLMIIRKVMKMDAAEPFNVPVNPEALGIPDYFDIIDTPMDFGTICSNLEKN 249
Query: 760 HIYKNSEDVFKDVQYIWENCYKYNNKGDYIVDLMRRVKKNFMKYWTAAGLYTRKSNVKGT 939
Y NSEDV+ DV+YIWENCYKYNNKGDYIVDLM+RVKKNFMKYW AAGLY+ +
Sbjct: 250 DKYMNSEDVYNDVRYIWENCYKYNNKGDYIVDLMKRVKKNFMKYWAAAGLYSEQPK---- 305
Query: 940 LNGNTDDAPGQYSRKEVPVEDDQGKERIFVGKGRMSDIMSKKENGQPLSLNASARLQMET 1119
G+T + + +++ + D GK GKG KK++G+
Sbjct: 306 --GSTGT---ERTTEDIALSGD-GK----AGKGGQLK-HKKKKHGR-------------- 340
Query: 1120 APLPSQERLHVKGTNAXXXXXXXXXXXXXXSDCLCAVCVMXXXXXXXXMNAKVVENRIEI 1299
H K DCLCA+CV+ N ++ +
Sbjct: 341 ---------HHK------------------HDCLCAICVLKRRRKEREENDRIAKGNFGS 373
Query: 1300 SDGNVSKEFKQEETP-IENHCSEDASSNLGHSPETDADGDLEVQGEEMKLERLERHGSAQ 1476
N ++FKQEE+ +E+ ED+ SN TD D D + +GE K+E E++ S
Sbjct: 374 GSDNHGRDFKQEESMLVESPGGEDSLSNTDELLGTDGDVD-DDKGEVTKMETSEKNCSPS 432
Query: 1477 QGINEENAEMRKTVRNNYFNQYQLGHGSREEHNLQSQSEEMEDSSIMIQKHNRKDDT--- 1647
G +E N V ++ + G EE + E E+ M + R D+T
Sbjct: 433 DGRHEVNE-----VDDDGMEEENHGPEDVEEDEEEDGEGENEEEIEMNRVKRRMDETLRH 487
Query: 1648 --PPPEESRXXXXXXXXXXXXXXX------TLMSKNLH----------------LNENPT 1755
EES + + H +ENP
Sbjct: 488 GGTLAEESEVGDTAALHDEYKNTQQEGQAAVVQQQKKHKEPQDKHQKAKLLESLCSENPM 547
Query: 1756 IMELCGTLFPSNRKSAWSGPHSLVCHDLPVRRSSAIHEALEMFMK*ILANLHTTVAVFFR 1935
+ LCGTLFP N +S WSGPHSL+ H R+S+IH A+ M LA+ V
Sbjct: 548 LSSLCGTLFPKNSQSVWSGPHSLI-HQRKSARTSSIHAAIGSLMDFFLADDSMAVESLMA 606
Query: 1936 FSPQISL 1956
F+ + ++
Sbjct: 607 FTSECTI 613
>ref|XP_004135351.1| PREDICTED: uncharacterized protein LOC101220569 [Cucumis sativus]
gi|449503289|ref|XP_004161928.1| PREDICTED:
uncharacterized LOC101220569 [Cucumis sativus]
Length = 564
Score = 271 bits (693), Expect = 5e-70
Identities = 187/507 (36%), Positives = 260/507 (51%), Gaps = 10/507 (1%)
Frame = +1
Query: 400 SRKTASIKIKSSRGIATTNQTSGPLHCQGDRIVTDDHKTIASSMSNDSHHKEHNLPRQDA 579
S+K SIKIK+S+ +N + + ++ D +P +D+
Sbjct: 150 SKKPGSIKIKASKSSGASNNSISTV----GKVQADTR-----------------MPSKDS 188
Query: 580 RYNKQDLNTALAVIKKIMKMDAAEPFNAPVDPVALGIPDYFDIIEIPMDFGTICNNIEEG 759
R NK++L++AL VIKK+MKMDAAEPFN PV+PVALGIPDYFD+I+ PMDFGTIC+N+E G
Sbjct: 189 RPNKKELDSALTVIKKVMKMDAAEPFNVPVNPVALGIPDYFDVIDTPMDFGTICSNLENG 248
Query: 760 HIYKNSEDVFKDVQYIWENCYKYNNKGDYIVDLMRRVKKNFMKYWTAAGLYTRKSNVKGT 939
Y NSEDVFKDV+YIWENCYKYNNKGDYI+DLMRRVKKNF KYW+AAGLY
Sbjct: 249 VKYMNSEDVFKDVRYIWENCYKYNNKGDYILDLMRRVKKNFSKYWSAAGLY--------- 299
Query: 940 LNGNTDDAPGQYSRKEVPVEDDQGKERIFVGKGRMSDIMSKKENGQPLSLNASARLQMET 1119
NG T G +E QGK KG+ S SKK +G
Sbjct: 300 -NGQTTATNGVDISQENGGASSQGKHL----KGQ-SKQKSKKRHG--------------- 338
Query: 1120 APLPSQERLHVKGTNAXXXXXXXXXXXXXXSDCLCAVCVMXXXXXXXXMNAKVVENRIEI 1299
R H SDCLCA+CV+ A++ +++
Sbjct: 339 -------RRH-------------------KSDCLCAICVLKRRRREREETARIAKDQTG- 371
Query: 1300 SDGNVSKEFKQEET-PIENHCSEDASSN-------LGHSPETDADGDLEVQGEEMKLERL 1455
+ N++++ K EE+ E+ S D+SSN LG ET +G +EV ++
Sbjct: 372 AGNNLARDLKFEESLRGESPGSVDSSSNADDSDNELGVEEETGDEGKMEVSKQQFSTPDD 431
Query: 1456 ERHGSAQQGINEENAEMRKTVRNNYFNQYQLGHGSREEHN--LQSQSEEMEDSSIMIQKH 1629
++ A + +E N ++ ++ N+ SRE+++ L+S EE+ D +
Sbjct: 432 DKQDEADEEKDEGNEMGQRIAADSKGNEQ--SERSREDYDRPLKSTMEELGDLKMEDVPQ 489
Query: 1630 NRKDDTPPPEESRXXXXXXXXXXXXXXXTLMSKNLHLNENPTIMELCGTLFPSNRKSAWS 1809
+ + EE + L + +NP ++ELCG +FP N KS W
Sbjct: 490 DIHNSEQKEEEEK------------QRKKLKAWEELSTKNPMVLELCGVVFPVNPKSVWR 537
Query: 1810 GPHSLVCHDLPVRRSSAIHEALEMFMK 1890
GPHSL+ H P R+S+IH A+E FMK
Sbjct: 538 GPHSLLPHRRP-SRTSSIHVAIEEFMK 563
>ref|XP_002886720.1| hypothetical protein ARALYDRAFT_475449 [Arabidopsis lyrata subsp.
lyrata] gi|297332561|gb|EFH62979.1| hypothetical protein
ARALYDRAFT_475449 [Arabidopsis lyrata subsp. lyrata]
Length = 585
Score = 244 bits (623), Expect = 7e-62
Identities = 181/524 (34%), Positives = 244/524 (46%), Gaps = 28/524 (5%)
Frame = +1
Query: 403 RKTASIKIKSSRGI----ATTNQTSGPLHCQGDRIVTDDHKTI-----ASSMSND----S 543
RKT IKIK+S+ + + T +++ + Q ++ D KT AS + S
Sbjct: 142 RKTKGIKIKTSKMVDGSSSVTEKSADAVKVQDAVVLQKDTKTPDEDSQASKKEPEVAPIS 201
Query: 544 HHKEHNLPRQDARYNKQDLNTALAVIKKIMKMDAAEPFNAPVDPVALGIPDYFDIIEIPM 723
KE Q++RYNKQ+L +L VIKKIMKMDAA+PFN PV+P ALGIPDYFDII+ PM
Sbjct: 202 LQKEEKKTDQNSRYNKQELEDSLTVIKKIMKMDAADPFNVPVNPEALGIPDYFDIIKTPM 261
Query: 724 DFGTICNNIEEGHIYKNSEDVFKDVQYIWENCYKYNNKGDYIVDLMRRVKKNFMKYWTAA 903
DFGTICNN E+G+ Y NSEDV+KDV YIW NC KYN KGDYIVDLM+RVKKNFMKYWTAA
Sbjct: 262 DFGTICNNFEKGNKYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTAA 321
Query: 904 GLYTRKSNVKGTLNGNTDDAPGQYSRKEVPVEDDQGKERIFVGKGRMSDIMSKKENGQPL 1083
GLYT +S + T +D GK KG S S K +G+
Sbjct: 322 GLYTEQSAAENT--------------------EDGGKAST---KGSQSKQKSHKRHGR-- 356
Query: 1084 SLNASARLQMETAPLPSQERLHVKGTNAXXXXXXXXXXXXXXSDCLCAVCVMXXXXXXXX 1263
H K SDC+CAVCV+
Sbjct: 357 ---------------------HHK------------------SDCMCAVCVL-------- 369
Query: 1264 MNAKVVENRIEISDGNVSKEFKQEETPIENHCSEDASSNLGHSPETDADGDLEVQGEEMK 1443
K + E G ++E +P + +++S N+G + D D + + E+ +
Sbjct: 370 ---KRRKRERERDSGA-----QEESSPTGSPSVDNSSINMGEEQDMDIGVDDKTEQEKTE 421
Query: 1444 LERLERHGSAQQGINEENAEM----------RKTVRNNYFNQYQLGHGSREEHNLQSQSE 1593
+ L+ S Q + E N E+ N ++ Q S EE + +
Sbjct: 422 IVELDSPVSRTQRVPENNQEVVEEENVEVESENKTEANVEDKTQSIDISMEETGDEPVTS 481
Query: 1594 EMEDSSIMIQKHNRKDDTPPPEES--RXXXXXXXXXXXXXXXTLMSKNLHLNENPTIMEL 1767
E S ++ K EE + + + NP ++ L
Sbjct: 482 AAEKSVVLASLEGPKSTQNEEEEKEKQLQEQKKRQELERKEWRIKMQEKFQVRNPQLLSL 541
Query: 1768 CGTLFPS--NRKSAWSGPHSLV-CHDLPVRRSSAIHEALEMFMK 1890
C TLFP+ N S W+GPHSL SSA+H+A+E MK
Sbjct: 542 CETLFPNENNHNSVWNGPHSLFKRRGGSSNHSSALHKAVESLMK 585