BLASTX nr result

ID: Coptis24_contig00004711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004711
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...    66   4e-09
ref|XP_002534155.1| chaperone protein DNAj, putative [Ricinus co...    57   2e-06
ref|NP_001241410.1| uncharacterized protein LOC100811478 [Glycin...    55   9e-06

>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +3

Query: 369 SKQVPMFSTRRSMHRASRPNLISCRASTLETK-RVGTNFYEVLSLDSENVSFEEVKKAYR 545
           + ++P+   + S  ++ +   I C+ +T E   R   NFYEVLSL S+NV F+E+KKAYR
Sbjct: 12  ANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNVGFDEIKKAYR 71

Query: 546 SMARQYHPDVVPASRK 593
           SMA QYHPDV P S K
Sbjct: 72  SMALQYHPDVCPPSAK 87


>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +3

Query: 369 SKQVPMFSTRRSMHRASRPNLISCRASTLETK-RVGTNFYEVLSLDSENVSFEEVKKAYR 545
           + ++P+   + S  ++ +   I C+ +T E   R   NFYEVLSL S+NV F+E+KKAYR
Sbjct: 12  ANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNVGFDEIKKAYR 71

Query: 546 SMARQYHPDVVPASRK 593
           SMA QYHPDV P S K
Sbjct: 72  SMALQYHPDVCPPSAK 87


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +3

Query: 372 KQVPMFSTRRSMHRA--SRPNLISCRASTLETKRVGTNFYEVLSLDSENVSFEEVKKAYR 545
           K VP     RS  +   ++   I+C    ++ K+  TNFYEVLSL S+NV F+E++KAYR
Sbjct: 13  KVVPFLRKIRSRQKGFHNKARTITCSYRIMQEKK--TNFYEVLSLQSKNVGFDEIRKAYR 70

Query: 546 SMARQYHPDVVPASRK 593
           SMA Q+HPDV   S K
Sbjct: 71  SMALQFHPDVCRLSAK 86


>ref|XP_002534155.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223525777|gb|EEF28227.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 173

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = +3

Query: 393 TRRSMHRASRPN-LISCRASTLETKRVGTNFYEVLSLDSENVSFEEVKKAYRSMARQYHP 569
           ++   H+   P+ LISC+A++       TN Y+VLSL+ +  S EE+KKAYR+MA +YHP
Sbjct: 18  SKHHQHQHQIPHKLISCKATSTIIINNDTNLYKVLSLNPKESSLEEIKKAYRNMALRYHP 77

Query: 570 DV 575
           DV
Sbjct: 78  DV 79


>ref|NP_001241410.1| uncharacterized protein LOC100811478 [Glycine max]
           gi|255639401|gb|ACU19996.1| unknown [Glycine max]
          Length = 188

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 29/81 (35%), Positives = 47/81 (58%)
 Frame = +3

Query: 333 SLCQMMISCQLNSKQVPMFSTRRSMHRASRPNLISCRASTLETKRVGTNFYEVLSLDSEN 512
           S   + +S    S  +P+ S +     + +   +SCRA+TL  +    N Y++LS+   +
Sbjct: 8   SSSSLSMSKPFESHGLPLSSKQHRRPSSVKFGSVSCRATTLTQE----NLYKILSVSPGS 63

Query: 513 VSFEEVKKAYRSMARQYHPDV 575
            + +E+K+AYRSMA QYHPDV
Sbjct: 64  ATMDEIKRAYRSMALQYHPDV 84


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