BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004688
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein no...   344   e-156
ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arab...   329   e-149
ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic...   333   e-148
ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana] ...   328   e-148
ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein no...   338   e-144

>ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
           [Vitis vinifera] gi|302142895|emb|CBI20190.3| unnamed
           protein product [Vitis vinifera]
          Length = 457

 Score =  344 bits (883), Expect(2) = e-156
 Identities = 177/231 (76%), Positives = 200/231 (86%), Gaps = 1/231 (0%)
 Frame = -3

Query: 814 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 635
           QSS+ YYCAVTIG+DAVISA+RLSE+RNRS+VGAILSKVVPA FST++S SKMIWRSE+ 
Sbjct: 227 QSSQRYYCAVTIGDDAVISAFRLSEDRNRSLVGAILSKVVPATFSTIASFSKMIWRSEQK 286

Query: 634 SSNK-EVKPQTFAKASSLTCLKDYPRKGEKLTLSPGGTLAAITDSLGRILLLDTEALVVQ 458
           S  + E KPQ FA+AS LTCLKD+PRKGEKLTLSP GTLAAITDSLGRILLLDT+ALVV 
Sbjct: 287 SPKRSEPKPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVV 346

Query: 457 RIWKGYRDARCLFMEMIVGRDTVSSSTTYREQSKSGYYLCLAILAPRKGIVEVWQMRIGP 278
           R+WKGYRDA CLF EM+V +DT +SS++Y E  KS Y LCLAI APRKGIVEVWQMR GP
Sbjct: 347 RLWKGYRDASCLFTEMLVSKDTAASSSSYYEPVKSDYCLCLAIHAPRKGIVEVWQMRTGP 406

Query: 277 RLLVIQCATGSMILQPTPRFGSLIAESSYVPLEVFLLNGDSGQISVINRSL 125
           RLL +QC+ GS ILQPT RFGS +  S YVPLEVFLLNGDSGQ+SV+NRSL
Sbjct: 407 RLLTVQCSKGSKILQPTYRFGSSMG-SPYVPLEVFLLNGDSGQLSVLNRSL 456



 Score =  234 bits (597), Expect(2) = e-156
 Identities = 122/223 (54%), Positives = 166/223 (74%), Gaps = 14/223 (6%)
 Frame = -1

Query: 1482 MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 1303
            MAR+ + TE+G I C EL+E GAGK E WL+ENP+L+ +L T S ALANRS +L++ + E
Sbjct: 1    MARRVYTTELGCIACNELSELGAGK-EAWLVENPSLICALDTDSLALANRSFVLVLGWSE 59

Query: 1302 N----HVIKKIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQI 1138
            N    +   KI+P L+ IE E ITA+EW+VFD+ RV+ +GTS+GYL+ YSL  DLIHKQ+
Sbjct: 60   NGDPYNSPVKIRPTLSQIETERITAVEWLVFDEIRVLAVGTSSGYLMIYSLGADLIHKQM 119

Query: 1137 VHPGNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLV 958
            ++PG I + RVRG K + ++    S++EEVCVVMPGVIARFDG+D++S++QRWF+++H  
Sbjct: 120  INPGRILKFRVRGTKRDLTQG---SSSEEVCVVMPGVIARFDGADLQSMLQRWFQDTHSQ 176

Query: 957  L---RLKKRE------DYGRLPHQLWNVSKYGSCSDAAITGIM 856
                + K+R+       YGRLP+QLWNVSKYG C+DAAITG M
Sbjct: 177  FWDEKPKRRDQEDSEKSYGRLPYQLWNVSKYGPCADAAITGTM 219


>ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
           lyrata] gi|297328741|gb|EFH59160.1| hypothetical protein
           ARALYDRAFT_478912 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  329 bits (844), Expect(2) = e-149
 Identities = 169/232 (72%), Positives = 192/232 (82%), Gaps = 2/232 (0%)
 Frame = -3

Query: 814 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 635
           QSS+ YYCAVTIGEDAVISAYRLSE+R RS+VGAILSKVVPAA ST++S SK+IWRS   
Sbjct: 224 QSSQRYYCAVTIGEDAVISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQ 283

Query: 634 SSNK--EVKPQTFAKASSLTCLKDYPRKGEKLTLSPGGTLAAITDSLGRILLLDTEALVV 461
           S  +  E K Q+FA+ASSLTC+KDYPRKGEKLTLSP GTLAAITDSLGRILLLDT+ALVV
Sbjct: 284 SPKRKPEAKTQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVV 343

Query: 460 QRIWKGYRDARCLFMEMIVGRDTVSSSTTYREQSKSGYYLCLAILAPRKGIVEVWQMRIG 281
            R+WKGYRDA C+FMEM+  +D    S  + E  KS Y LCLAI APRKGI+EVWQMR G
Sbjct: 344 VRLWKGYRDASCVFMEMLAKKDK-GKSVIHTEPVKSDYCLCLAIHAPRKGIIEVWQMRTG 402

Query: 280 PRLLVIQCATGSMILQPTPRFGSLIAESSYVPLEVFLLNGDSGQISVINRSL 125
           PRLL IQCA GS +LQP  RFGS  + S Y+PLEVFLLNGDSGQ+S++NRSL
Sbjct: 403 PRLLTIQCANGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQVSMLNRSL 454



 Score =  226 bits (576), Expect(2) = e-149
 Identities = 119/220 (54%), Positives = 162/220 (73%), Gaps = 11/220 (5%)
 Frame = -1

Query: 1482 MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 1303
            MA++ HLTE+G I C EL+E GAGK E WL+ NPNLL++L +HS ALANR LILI+N+ +
Sbjct: 1    MAKRIHLTELGCIACEELSELGAGK-EGWLVNNPNLLSALDSHSLALANRFLILIVNWGD 59

Query: 1302 NHVIK-KIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQIVHP 1129
                + KI+P L+ IE E ITAIEW+VFDD RV++ GTS GYLL YS+ GDLIHKQ+VHP
Sbjct: 60   PDAPRLKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVAGDLIHKQMVHP 119

Query: 1128 GNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLVLRL 949
              I ++RVRG K +  +    +++EE+C+V+PG+IARFDGS+I+S++Q+WF+E +     
Sbjct: 120  SRILKIRVRGTKKDLMQE---TSSEEICIVLPGIIARFDGSNIQSMLQKWFQEKNSNFWD 176

Query: 948  KKR-----ED----YGRLPHQLWNVSKYGSCSDAAITGIM 856
            +K      ED    Y RLP+Q+WNV+K G C DA +TG+M
Sbjct: 177  QKNRKGDVEDSGSLYQRLPYQIWNVNKNGVCVDATVTGVM 216


>ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic subunit, putative
           [Ricinus communis] gi|223536194|gb|EEF37847.1| rab3
           gtpase-activating protein non-catalytic subunit,
           putative [Ricinus communis]
          Length = 484

 Score =  333 bits (855), Expect(2) = e-148
 Identities = 169/224 (75%), Positives = 194/224 (86%), Gaps = 1/224 (0%)
 Frame = -3

Query: 814 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 635
           QSS+ YYCAVTIG+DAVISAYRLSE+R++S+VGAILSKVVPA FST++S+SKMIWRSEK 
Sbjct: 223 QSSQRYYCAVTIGDDAVISAYRLSEDRSKSLVGAILSKVVPATFSTIASLSKMIWRSEKA 282

Query: 634 SSNK-EVKPQTFAKASSLTCLKDYPRKGEKLTLSPGGTLAAITDSLGRILLLDTEALVVQ 458
           S  K E KPQ+FAKAS LTCLKD+PRKGEKLTLSPGGTLAAITDSLGRILLLDT+AL+V 
Sbjct: 283 SPKKSEAKPQSFAKASPLTCLKDHPRKGEKLTLSPGGTLAAITDSLGRILLLDTQALIVV 342

Query: 457 RIWKGYRDARCLFMEMIVGRDTVSSSTTYREQSKSGYYLCLAILAPRKGIVEVWQMRIGP 278
           R+WKGYRDA C FMEM V RD   +S++Y E SKS Y LCLAI APRKGI+EVWQMR GP
Sbjct: 343 RLWKGYRDASCFFMEMQVKRDNAGASSSYYEPSKSDYCLCLAIHAPRKGIIEVWQMRTGP 402

Query: 277 RLLVIQCATGSMILQPTPRFGSLIAESSYVPLEVFLLNGDSGQI 146
           RLL IQCA G+ +LQPT RFGS   +S Y+PLEVF+LNG+SGQ+
Sbjct: 403 RLLTIQCARGTKLLQPTYRFGS-SPDSPYIPLEVFVLNGESGQL 445



 Score =  221 bits (563), Expect(2) = e-148
 Identities = 114/217 (52%), Positives = 158/217 (72%), Gaps = 9/217 (4%)
 Frame = -1

Query: 1479 ARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHEN 1300
            ++++H TE+G I C EL++ GAGK E WL++NPNL  +L THS A++NR LILI  + + 
Sbjct: 3    SKRSHTTELGCIACEELSDVGAGK-EGWLVDNPNLKCALDTHSIAISNRYLILITGWDDG 61

Query: 1299 HVIKKIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQIVHPGN 1123
              +K I+P L+ IE E ITA+EW+VFD+ RV+ +GTS GY L YSLDG LIHKQ+V+PG 
Sbjct: 62   PRLK-IRPDLSPIESESITALEWLVFDEIRVVAVGTSCGYFLVYSLDGHLIHKQMVYPGR 120

Query: 1122 IRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLVLRLKK 943
            I ++RVRG K + ++    S++EE+ +VMPGVIARFDGSD+++++Q W +E H     +K
Sbjct: 121  ILKIRVRGTKKDLTQ--QTSSSEEISIVMPGVIARFDGSDLQNMLQEWIQEKHSQFWDEK 178

Query: 942  RE--------DYGRLPHQLWNVSKYGSCSDAAITGIM 856
                       Y RLP+QLWNV+KYGSC+DAAITG+M
Sbjct: 179  PNRDADGLGITYKRLPYQLWNVNKYGSCADAAITGVM 215


>ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8777474|dbj|BAA97054.1| unnamed protein product
           [Arabidopsis thaliana] gi|63147384|gb|AAY34165.1|
           At3g14910 [Arabidopsis thaliana]
           gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis
           thaliana] gi|332642066|gb|AEE75587.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 455

 Score =  328 bits (840), Expect(2) = e-148
 Identities = 168/232 (72%), Positives = 192/232 (82%), Gaps = 2/232 (0%)
 Frame = -3

Query: 814 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 635
           QSS+ YYCAVTIGED+VISAYRLSE+R RS+VGAILSKVVPAA ST++S SK+IWRS   
Sbjct: 224 QSSQRYYCAVTIGEDSVISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQ 283

Query: 634 SSNK--EVKPQTFAKASSLTCLKDYPRKGEKLTLSPGGTLAAITDSLGRILLLDTEALVV 461
           S  +  E K Q+FA+ASSLTC+KDYPRKGEKLTLSP GTLAAITDSLGRILLLDT+ALVV
Sbjct: 284 SPKRKPEAKTQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVV 343

Query: 460 QRIWKGYRDARCLFMEMIVGRDTVSSSTTYREQSKSGYYLCLAILAPRKGIVEVWQMRIG 281
            R+WKGYRDA C+FMEM+  +D    S  + E  KS Y LCLAI APRKGI+EVWQMR G
Sbjct: 344 VRLWKGYRDASCVFMEMLAKKDK-GKSVIHTEPVKSDYCLCLAIHAPRKGIIEVWQMRTG 402

Query: 280 PRLLVIQCATGSMILQPTPRFGSLIAESSYVPLEVFLLNGDSGQISVINRSL 125
           PRLL IQCA GS +LQP  RFGS  + S Y+PLEVFLLNGDSGQ+S++NRSL
Sbjct: 403 PRLLTIQCAKGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQVSMLNRSL 454



 Score =  224 bits (571), Expect(2) = e-148
 Identities = 120/220 (54%), Positives = 159/220 (72%), Gaps = 11/220 (5%)
 Frame = -1

Query: 1482 MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 1303
            MA++ HLTE+G I C ELTE GAGK E WL+ NPNLL++L +HS ALANR LILI+N+ +
Sbjct: 1    MAKRIHLTELGCIACEELTELGAGK-EGWLVNNPNLLSALDSHSLALANRFLILIVNWGD 59

Query: 1302 NHVIK-KIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQIVHP 1129
                + KI+P L+ IE E ITAIEW+VFDD RV++ GTS GYLL YS+ GDLIHKQIVH 
Sbjct: 60   PDAPRVKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVTGDLIHKQIVHQ 119

Query: 1128 GNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLVL-- 955
              I ++RVRG K +  +    +++EE+C+V+PGVIARFDGS+I+S++Q+W +E +     
Sbjct: 120  SRILKIRVRGTKKDLMQE---TSSEEICIVLPGVIARFDGSNIQSMVQKWVQEKNSNFWD 176

Query: 954  ---RLKKRED----YGRLPHQLWNVSKYGSCSDAAITGIM 856
               R    ED    Y RLP+Q+WNV+K G C DA +TG+M
Sbjct: 177  QKNRKGDAEDTGSLYQRLPYQIWNVNKNGVCVDATVTGVM 216


>ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 459

 Score =  338 bits (866), Expect(2) = e-144
 Identities = 172/231 (74%), Positives = 197/231 (85%), Gaps = 1/231 (0%)
 Frame = -3

Query: 814 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 635
           QSS+ YYCAV +GEDAVISAYRLSEN+ RS+VGAILSKVVPA FST+SS SK+IWRSE+ 
Sbjct: 228 QSSQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPATFSTISSFSKLIWRSEQS 287

Query: 634 SSNK-EVKPQTFAKASSLTCLKDYPRKGEKLTLSPGGTLAAITDSLGRILLLDTEALVVQ 458
           S  K + KPQ FA+AS LTCLKD+PRKGEKLTLSP GTLAAITDSLGRILLLDT+ALVV 
Sbjct: 288 SPKKSDQKPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVV 347

Query: 457 RIWKGYRDARCLFMEMIVGRDTVSSSTTYREQSKSGYYLCLAILAPRKGIVEVWQMRIGP 278
           R+WKGYRDA CLFMEM+V +D  SSS++Y E  KS Y LCLAI APRKGI+E+WQMR GP
Sbjct: 348 RLWKGYRDASCLFMEMLVNKDIASSSSSYSEPLKSDYCLCLAIHAPRKGIIEIWQMRTGP 407

Query: 277 RLLVIQCATGSMILQPTPRFGSLIAESSYVPLEVFLLNGDSGQISVINRSL 125
           RL  I CA GS +LQP+ RFG+ ++ S YVPLEVFLLNGDSGQISV+NR+L
Sbjct: 408 RLRTISCAKGSKMLQPSYRFGASMS-SPYVPLEVFLLNGDSGQISVLNRTL 457



 Score =  202 bits (513), Expect(2) = e-144
 Identities = 106/223 (47%), Positives = 156/223 (69%), Gaps = 14/223 (6%)
 Frame = -1

Query: 1482 MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 1303
            MAR+++ TE+G I C EL E GAGK  +WL+E P LL ++ THS  LANRS IL++++  
Sbjct: 1    MARRSYKTELGCIACEELGELGAGKP-HWLVETPQLLCAIDTHSLILANRSTILLLSWSS 59

Query: 1302 NHVIK----KIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQI 1138
            +        KI+P L+ I+ E I+A+EW+ F D RVI+ GTS+G +LFYSL G+LIH+Q+
Sbjct: 60   DSSAAPPPLKIRPDLSPIDAESISALEWLAFRDHRVIVAGTSSGNVLFYSLRGELIHRQM 119

Query: 1137 VHPGNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLV 958
            ++P  + +LRVRG K +  +    +++EE C++M GVIA FDGSDI++++Q+WF ESH  
Sbjct: 120  IYPSRVLKLRVRGTKKDLIQD---TSSEEFCLIMSGVIAHFDGSDIQNMLQKWFEESHSR 176

Query: 957  L-----RLKKREDYG----RLPHQLWNVSKYGSCSDAAITGIM 856
                  +    ED+G    ++P+QLWN+ KYG+C++AAITGIM
Sbjct: 177  FWDQNPKSHDSEDFGNTDVKIPYQLWNIGKYGTCAEAAITGIM 219