BLASTX nr result
ID: Coptis24_contig00004685
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004685 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002891442.1| leucine-rich repeat family protein [Arabidop... 76 2e-12 gb|AAF79701.1|AC020889_9 T1N15.16 [Arabidopsis thaliana] 75 5e-12 ref|NP_973992.1| Outer arm dynein light chain 1 protein [Arabido... 75 5e-12 ref|NP_175287.2| Outer arm dynein light chain 1 protein [Arabido... 75 5e-12 ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800... 74 9e-12 >ref|XP_002891442.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297337284|gb|EFH67701.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] Length = 1066 Score = 76.3 bits (186), Expect = 2e-12 Identities = 37/51 (72%), Positives = 45/51 (88%) Frame = -2 Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2 +SQV+C +VKLVLRNNALT+L GIE LKS+EGLD+SYN+ISN S+LE L S Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLEGLDVSYNIISNFSELEFLWS 281 >gb|AAF79701.1|AC020889_9 T1N15.16 [Arabidopsis thaliana] Length = 924 Score = 75.1 bits (183), Expect = 5e-12 Identities = 36/51 (70%), Positives = 45/51 (88%) Frame = -2 Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2 +SQV+C +VKLVLRNNALT+L GIE LKS++GLD+SYN+ISN S+LE L S Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWS 281 >ref|NP_973992.1| Outer arm dynein light chain 1 protein [Arabidopsis thaliana] gi|332194191|gb|AEE32312.1| Outer arm dynein light chain 1 protein [Arabidopsis thaliana] Length = 1051 Score = 75.1 bits (183), Expect = 5e-12 Identities = 36/51 (70%), Positives = 45/51 (88%) Frame = -2 Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2 +SQV+C +VKLVLRNNALT+L GIE LKS++GLD+SYN+ISN S+LE L S Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWS 281 >ref|NP_175287.2| Outer arm dynein light chain 1 protein [Arabidopsis thaliana] gi|332194190|gb|AEE32311.1| Outer arm dynein light chain 1 protein [Arabidopsis thaliana] Length = 1063 Score = 75.1 bits (183), Expect = 5e-12 Identities = 36/51 (70%), Positives = 45/51 (88%) Frame = -2 Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2 +SQV+C +VKLVLRNNALT+L GIE LKS++GLD+SYN+ISN S+LE L S Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWS 281 >ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800812 [Glycine max] Length = 1026 Score = 74.3 bits (181), Expect = 9e-12 Identities = 35/49 (71%), Positives = 45/49 (91%) Frame = -2 Query: 151 SQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILA 5 +QV+C +VKLVLRNNALT+L+GIE LKS+EGLD+SYN+ISN S+LE +A Sbjct: 232 TQVSCHIVKLVLRNNALTTLHGIENLKSLEGLDVSYNIISNFSELEFVA 280