BLASTX nr result

ID: Coptis24_contig00004685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004685
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002891442.1| leucine-rich repeat family protein [Arabidop...    76   2e-12
gb|AAF79701.1|AC020889_9 T1N15.16 [Arabidopsis thaliana]               75   5e-12
ref|NP_973992.1| Outer arm dynein light chain 1 protein [Arabido...    75   5e-12
ref|NP_175287.2| Outer arm dynein light chain 1 protein [Arabido...    75   5e-12
ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800...    74   9e-12

>ref|XP_002891442.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337284|gb|EFH67701.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1066

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = -2

Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2
           +SQV+C +VKLVLRNNALT+L GIE LKS+EGLD+SYN+ISN S+LE L S
Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLEGLDVSYNIISNFSELEFLWS 281


>gb|AAF79701.1|AC020889_9 T1N15.16 [Arabidopsis thaliana]
          Length = 924

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = -2

Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2
           +SQV+C +VKLVLRNNALT+L GIE LKS++GLD+SYN+ISN S+LE L S
Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWS 281


>ref|NP_973992.1| Outer arm dynein light chain 1 protein [Arabidopsis thaliana]
           gi|332194191|gb|AEE32312.1| Outer arm dynein light chain
           1 protein [Arabidopsis thaliana]
          Length = 1051

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = -2

Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2
           +SQV+C +VKLVLRNNALT+L GIE LKS++GLD+SYN+ISN S+LE L S
Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWS 281


>ref|NP_175287.2| Outer arm dynein light chain 1 protein [Arabidopsis thaliana]
           gi|332194190|gb|AEE32311.1| Outer arm dynein light chain
           1 protein [Arabidopsis thaliana]
          Length = 1063

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = -2

Query: 154 MSQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILAS 2
           +SQV+C +VKLVLRNNALT+L GIE LKS++GLD+SYN+ISN S+LE L S
Sbjct: 231 LSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWS 281


>ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800812 [Glycine max]
          Length = 1026

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/49 (71%), Positives = 45/49 (91%)
 Frame = -2

Query: 151 SQVACSMVKLVLRNNALTSLNGIETLKSIEGLDLSYNVISNVSKLEILA 5
           +QV+C +VKLVLRNNALT+L+GIE LKS+EGLD+SYN+ISN S+LE +A
Sbjct: 232 TQVSCHIVKLVLRNNALTTLHGIENLKSLEGLDVSYNIISNFSELEFVA 280


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