BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004683
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35920.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   134   1e-29
gb|AFK41205.1| unknown [Lotus japonicus]                              130   2e-28
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   127   2e-27
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   119   4e-25

>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  134 bits (337), Expect = 1e-29
 Identities = 70/128 (54%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = +2

Query: 5   EKKKLSCICSYITHLIKFKDQRSANSASTKNHYLPGILNRRFSTTFA-DSDSNHKRNFPS 181
           EK  L+CI SYI HL+K+KD+ S +++S K+H +PGILN++FS+ FA DSDS        
Sbjct: 260 EKTTLACIFSYINHLLKYKDRNSMDASSAKHHKIPGILNQKFSSMFALDSDSRRLTE--- 316

Query: 182 IEKRNFLISYVLVLALIVDGYRTDMYDIARDLKISVGTVREHYTNLGCKLKLENKTLYAT 361
            EK++ LISYVLVL L  D +RTD  DIARDL++S   +R H+ +LGCKL  +NK   AT
Sbjct: 317 -EKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMAT 375

Query: 362 LPVPLEFP 385
           LPVPL FP
Sbjct: 376 LPVPLTFP 383


>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
           vinifera]
          Length = 421

 Score =  134 bits (337), Expect = 1e-29
 Identities = 70/128 (54%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = +2

Query: 5   EKKKLSCICSYITHLIKFKDQRSANSASTKNHYLPGILNRRFSTTFA-DSDSNHKRNFPS 181
           EK  L+CI SYI HL+K+KD+ S +++S K+H +PGILN++FS+ FA DSDS        
Sbjct: 290 EKTTLACIFSYINHLLKYKDRNSMDASSAKHHKIPGILNQKFSSMFALDSDSRRLTE--- 346

Query: 182 IEKRNFLISYVLVLALIVDGYRTDMYDIARDLKISVGTVREHYTNLGCKLKLENKTLYAT 361
            EK++ LISYVLVL L  D +RTD  DIARDL++S   +R H+ +LGCKL  +NK   AT
Sbjct: 347 -EKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMAT 405

Query: 362 LPVPLEFP 385
           LPVPL FP
Sbjct: 406 LPVPLTFP 413


>gb|AFK41205.1| unknown [Lotus japonicus]
          Length = 347

 Score =  130 bits (328), Expect = 2e-28
 Identities = 68/128 (53%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
 Frame = +2

Query: 5   EKKKLSCICSYITHLIKFKDQRSANSAST-KNHYLPGILNRRFSTTFADSDSNHKRNFPS 181
           EKKK+SCI SY+ HLIKFKDQR+    S+ K+H +P IL  +FS+ F  ++S    N   
Sbjct: 215 EKKKMSCIFSYLNHLIKFKDQRTMQGVSSAKSHKIPPILRYKFSSMFGATESRRLPN--- 271

Query: 182 IEKRNFLISYVLVLALIVDGYRTDMYDIARDLKISVGTVREHYTNLGCKLKLENKTLYAT 361
            ++ N LI YVLVL L  D +RTD  DI++DL++SV  VR+HY++LGCK   +NK  YAT
Sbjct: 272 -DELNLLICYVLVLTLFSDEFRTDYTDISKDLRMSVLLVRQHYSDLGCKFLSQNKISYAT 330

Query: 362 LPVPLEFP 385
           LPVPL+FP
Sbjct: 331 LPVPLKFP 338


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
           [Glycine max]
          Length = 424

 Score =  127 bits (319), Expect = 2e-27
 Identities = 70/127 (55%), Positives = 86/127 (67%)
 Frame = +2

Query: 5   EKKKLSCICSYITHLIKFKDQRSANSASTKNHYLPGILNRRFSTTFADSDSNHKRNFPSI 184
           EKK+LSCI SYI HLIKFKDQ S +  S K H +P IL  +FS  FA S+S  KR  P  
Sbjct: 293 EKKQLSCIFSYINHLIKFKDQHSFDVLSAKGHKIPNILRHKFSNMFAVSES--KRLPP-- 348

Query: 185 EKRNFLISYVLVLALIVDGYRTDMYDIARDLKISVGTVREHYTNLGCKLKLENKTLYATL 364
           EK + LI YVLVL L  D +RTD  DIA+DL +++  VR+ Y +LGCK+  +    YATL
Sbjct: 349 EKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMNILPVRQLYEHLGCKISRQKNIFYATL 408

Query: 365 PVPLEFP 385
           PVPL+FP
Sbjct: 409 PVPLKFP 415


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
           gi|449480549|ref|XP_004155927.1| PREDICTED:
           uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  119 bits (299), Expect = 4e-25
 Identities = 64/129 (49%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
 Frame = +2

Query: 2   EEKKKLSCICSYITHLIKFKDQRSANSAST-KNHYLPGILNRRFSTTFADSDSNHKRNFP 178
           EEKKKL CI SYITHLIK+KDQ S    S+ K H +P +L ++FS+ F  ++S       
Sbjct: 303 EEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHKIPSMLRQKFSSMFPTAESRRL---- 358

Query: 179 SIEKRNFLISYVLVLALIVDGYRTDMYDIARDLKISVGTVREHYTNLGCKLKLENKTLYA 358
           S +K N LIS+VLVL+L  D + +D  DIA+DL+ S   +R H+ NLGCK   +N    A
Sbjct: 359 SADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYDLRLHFDNLGCKFIRKNNLSLA 418

Query: 359 TLPVPLEFP 385
           TLP+PL+FP
Sbjct: 419 TLPIPLQFP 427