BLASTX nr result

ID: Coptis24_contig00004670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004670
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253...   288   2e-75
ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250...   277   4e-72
ref|XP_003547145.1| PREDICTED: uncharacterized protein LOC100812...   275   2e-71
ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245...   267   3e-69
ref|XP_002519065.1| conserved hypothetical protein [Ricinus comm...   267   3e-69

>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
          Length = 708

 Score =  288 bits (736), Expect = 2e-75
 Identities = 167/380 (43%), Positives = 230/380 (60%), Gaps = 10/380 (2%)
 Frame = -2

Query: 1111 WGYSVPLSVGDQFYEQGGPII-EFDAVTPE--SSVQVIDKHLKGLLNVSYSLSLAPDYNV 941
            WG++ PL VGD+F   G  +  +F   +P    S  ++      ++N+SY LS  P  ++
Sbjct: 251  WGHAFPLFVGDKFV--GDQLYGKFRPHSPRLGGSEALVSTSHNSVVNISYKLSFTPSTSL 308

Query: 940  GGAPFSKKASLISTHADISAEGVYNPETGSLCMVGCRSVKTSN----HHSIDCEIQINIQ 773
                  K +S  S   +ISAEG+Y+ ETG LCMVGC+ ++++     + S+DC+I +N+Q
Sbjct: 309  --MLVGKISS--SRSVEISAEGIYDKETGVLCMVGCQHLQSNKPSTKNDSLDCKILVNVQ 364

Query: 772  FRPLNSKSSSYVKGTVESTRGQLDPFYFEKLQLFAVSLSTIQAAESVWRVDLEISMVLIS 593
            F PLN+   S VKGT+ESTRG+ D  YF+ L+L + S+   QAAES+WR+DLEI++VLIS
Sbjct: 365  FAPLNAGGRS-VKGTIESTRGKSDQLYFQHLELSSSSIYLSQAAESIWRMDLEITLVLIS 423

Query: 592  NTLICIFVGLQVFYVKKNPDVLPSISLVMLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
            NT  C+FVGLQ+FYVK++PDVLP IS+VML                              
Sbjct: 424  NTFACVFVGLQLFYVKRHPDVLPLISIVML--IVLTLGHMIPLLLNFEALFVANRNRQNV 481

Query: 412  XXXXXXXXXXXXXXXRVVTMVAFLLQFRLLQLTWSSKLGDGDQKVLLLAEKKALFVLLPL 233
                           RVVTM+AFLLQFRLLQLTWSS+  DG +  L ++EKK L++ LPL
Sbjct: 482  FLGSGGWLEVNEVIVRVVTMIAFLLQFRLLQLTWSSRSNDGSENALWVSEKKVLYLSLPL 541

Query: 232  YLIGAFVAWGLHWWINHNEAP---WRYGSISVYHGHSIWVDLRSYAGLLRDGFLLPQILL 62
            Y  GA +AW +H W N  + P    R   ++    H++W +L+SYAGL+ DGFLLPQI+ 
Sbjct: 542  YAGGALIAWFVHQWKNSYQIPLPRTRLAPVNYNQQHALWGELKSYAGLILDGFLLPQIMF 601

Query: 61   NVFSNIKDKALHPAFYVGIT 2
            N+F N K+KAL   FYVG T
Sbjct: 602  NLFFNPKEKALASPFYVGTT 621


>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
          Length = 932

 Score =  277 bits (708), Expect = 4e-72
 Identities = 173/388 (44%), Positives = 223/388 (57%), Gaps = 18/388 (4%)
 Frame = -2

Query: 1111 WGYSVPLSVGDQFY-----------EQGGPIIEFDAVTPESSVQVIDKHLKGLLNVSY-- 971
            W YS  +++GD+FY           E    +    A TPE+S +      + + NVSY  
Sbjct: 466  WAYSELITLGDRFYDRYAQSIVSLEESSVAVATSSASTPENSFETNASDSRPM-NVSYRI 524

Query: 970  SLSLAPDYNVGGAPFS-KKASLISTHADISAEGVYNPETGSLCMVGCRS----VKTSNHH 806
            SL+L P    G    S    S I T  +ISAEG+Y+ +TG LCMVGCR     VKTS++ 
Sbjct: 525  SLTLEPGVKFGDMIISPSNFSGIYTPVEISAEGIYDAKTGFLCMVGCRKLSSPVKTSSND 584

Query: 805  SIDCEIQINIQFRPLNSKSSSYVKGTVESTRGQLDPFYFEKLQLFAVSLSTIQAAESVWR 626
            S+DCEI +N+QF  LNSK+  Y+KG+++STR + DP YFE L L A S     A +S+WR
Sbjct: 585  SMDCEILVNLQFPQLNSKNRGYIKGSIQSTREKSDPLYFEHLDLSANSF--FGARQSIWR 642

Query: 625  VDLEISMVLISNTLICIFVGLQVFYVKKNPDVLPSISLVMLAXXXXXXXXXXXXXXXXXX 446
            +D EI MVLIS+TL C+FVGLQ+FYVKK+ +VLPSISLVML                   
Sbjct: 643  MDFEIIMVLISHTLSCVFVGLQLFYVKKHSEVLPSISLVMLV--VLTLGYMIPLVLNFEA 700

Query: 445  XXXXXXXXXXXXXXXXXXXXXXXXXXRVVTMVAFLLQFRLLQLTWSSKLGDGDQKVLLLA 266
                                      R+VTMV FLLQFRLLQLTW++KL +G QK    A
Sbjct: 701  LFLGSHDQRNALLESGGWIKANEVIVRIVTMVVFLLQFRLLQLTWAAKLKEGHQKGSWAA 760

Query: 265  EKKALFVLLPLYLIGAFVAWGLHWWINHNEAPWRYGSISVYHGHSIWVDLRSYAGLLRDG 86
            EKK L++ LP Y+ G  +A   +   N   A  +  S+  Y  HS+W DLRSYAGL+ DG
Sbjct: 761  EKKVLYLALPSYVAGCLIALFFNRGKNEYGAAVQSYSLPDYQQHSLWGDLRSYAGLVLDG 820

Query: 85   FLLPQILLNVFSNIKDKALHPAFYVGIT 2
            FL PQILLN+F++   KAL  +FYVG T
Sbjct: 821  FLFPQILLNMFTSSTVKALSHSFYVGTT 848


>ref|XP_003547145.1| PREDICTED: uncharacterized protein LOC100812795 [Glycine max]
          Length = 706

 Score =  275 bits (702), Expect = 2e-71
 Identities = 165/389 (42%), Positives = 222/389 (57%), Gaps = 20/389 (5%)
 Frame = -2

Query: 1108 GYSVPLSVGDQFYE---QGGPIIEFDAVTPESSVQVIDKHLKGLLNVSYSLSL--APDYN 944
            GYS PLSV DQ Y     G P +      P++     DK+   LLNVSY++SL   PD+ 
Sbjct: 242  GYSSPLSVCDQIYSGQSYGAPFV-LTTGKPKAHATQSDKY-SNLLNVSYTISLNPPPDFK 299

Query: 943  VGGAPFSKKASLISTHADISAEGVYNPETGSLCMVGCRSVKTSN-----HHSIDCEIQIN 779
             G         + ST   I AEG+YN  TG LCM+GC+ +++++     + ++DCEI +N
Sbjct: 300  FG-------RGVSSTKVKIGAEGIYNRNTGVLCMIGCQHLRSTDKILIKNETLDCEIMVN 352

Query: 778  IQFRPLNSKSSSYVKGTVESTRGQLDPFYFEKLQLFAVSLSTIQAAESVWRVDLEISMVL 599
            +QF PLN+K    + GT+ESTR + DP+YF+ LQL + S+   QA  S+WR+D E+ MVL
Sbjct: 353  VQFPPLNAKGGESLTGTIESTRQKSDPYYFDPLQLSSYSIYRNQADASIWRMDFELIMVL 412

Query: 598  ISNTLICIFVGLQVFYVKKNPDVLPSISLVMLAXXXXXXXXXXXXXXXXXXXXXXXXXXX 419
            +SNTL C+FVGLQ+ +VKK+PDVLP IS+VMLA                           
Sbjct: 413  VSNTLACVFVGLQLLHVKKHPDVLPYISVVMLA--VITLGHMIPLILNFEALFMANHSVQ 470

Query: 418  XXXXXXXXXXXXXXXXXRVVTMVAFLLQFRLLQLTWSSKLGDGDQKVLLLAEKKALFVLL 239
                             R+VTMVAFLL+ RL+QLTWSS+ G+G    L  +EKKAL++ L
Sbjct: 471  NTFLGSGGWLEVNEVVVRMVTMVAFLLELRLVQLTWSSRQGEGSHPGLWDSEKKALYITL 530

Query: 238  PLYLIGAFVAWGLHWWINHNEAPWRYGSIS----------VYHGHSIWVDLRSYAGLLRD 89
            PLY+ G   AW +H     ++  +R   +S           Y   S+W D +SYAGLL D
Sbjct: 531  PLYIGGGLTAWLVHISKTSHQKRFRPFRLSRHKFSLPREHFYRPPSLWEDFKSYAGLLLD 590

Query: 88   GFLLPQILLNVFSNIKDKALHPAFYVGIT 2
            GFLLPQILLN+  N + KAL  +FYVG T
Sbjct: 591  GFLLPQILLNIIFNSETKALASSFYVGTT 619


>ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245140 [Vitis vinifera]
          Length = 946

 Score =  267 bits (683), Expect = 3e-69
 Identities = 167/398 (41%), Positives = 222/398 (55%), Gaps = 27/398 (6%)
 Frame = -2

Query: 1114 SWGYSVPLSVGDQFYEQGGPIIEFDAVTPESSV---------QVIDKHLKGLL--NVSYS 968
            +WG+S P  V  + Y+     +   ++  +SSV         +V++ +    +  N+SY 
Sbjct: 474  AWGFSAPFVVDYRLYKPYQYAMPL-SINSKSSVPVSRPMPANRVVEANTSNSIPMNISYK 532

Query: 967  LS--LAPDYNVGGAPFS-KKASLISTHADISAEGVYNPETGSLCMVGCRSV----KTSNH 809
            +S  L P     G   S   +SL+ T  +ISAEG+YN  TG LCMVGCR +    + S +
Sbjct: 533  ISFMLEPGVEFEGFVSSLNSSSLMHTQVEISAEGIYNARTGGLCMVGCRKLSLMTRLSTN 592

Query: 808  HSIDCEIQINIQFRPLNSKSSSYVKGTVESTRGQLDPFYFEKLQLFAVSLSTIQAAESVW 629
             S+DCEI +N QF PLNSK   ++KGT++S R + DP YFE L L + S + ++A +S+W
Sbjct: 593  DSMDCEILVNFQFPPLNSKKG-HIKGTIKSRREKSDPLYFEHLDLSSTSYTVVEAKQSIW 651

Query: 628  RVDLEISMVLISNTLICIFVGLQVFYVKKNPDVLPSISLVMLAXXXXXXXXXXXXXXXXX 449
            R+DLEI MVLISNTL C+F+GLQ+FYVK  PDVLPSISL+ML                  
Sbjct: 652  RMDLEIFMVLISNTLSCVFLGLQLFYVKNQPDVLPSISLLMLV--ILTLGYMVPLVLNFE 709

Query: 448  XXXXXXXXXXXXXXXXXXXXXXXXXXXRVVTMVAFLLQFRLLQLTWSSKLGDGDQKVLLL 269
                                       RVVTMV FLLQFRLLQLTWS+K G  +QK L +
Sbjct: 710  ALFLQNHARQNVLLESGGWLKVNEVIVRVVTMVVFLLQFRLLQLTWSAKCGAENQKGLWV 769

Query: 268  AEKKALFVLLPLYLIGAFVAWGLHWWINHNEAPWRYG---------SISVYHGHSIWVDL 116
            AEK AL+V LP Y++G  ++  L      N     YG         S+  Y  HS W DL
Sbjct: 770  AEKNALYVSLPSYILGCLISLSL------NRTKTEYGAVKGLKASSSLISYQQHSHWQDL 823

Query: 115  RSYAGLLRDGFLLPQILLNVFSNIKDKALHPAFYVGIT 2
            RSYAGL  DGFL PQI+LN+F + +D+ L   FY+G T
Sbjct: 824  RSYAGLTLDGFLFPQIILNMFISSRDEPLSCWFYMGTT 861


>ref|XP_002519065.1| conserved hypothetical protein [Ricinus communis]
            gi|223541728|gb|EEF43276.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 964

 Score =  267 bits (683), Expect = 3e-69
 Identities = 152/376 (40%), Positives = 213/376 (56%), Gaps = 7/376 (1%)
 Frame = -2

Query: 1108 GYSVPLSVGDQFYEQGGPIIEFDAVTPESSVQVIDKHLKGLLNVSYSLSL--APDYNVGG 935
            G+S PL VGDQ  E                 ++ D H  GL+N+SYS++   + D+ +G 
Sbjct: 520  GFSSPLFVGDQLLEP---------------YRMNDNH-SGLVNISYSMTFTTSSDFQLGD 563

Query: 934  APFSKKASLISTHADISAEGVYNPETGSLCMVGCRSVKTSNHHS-----IDCEIQINIQF 770
               S  +       +ISAEG Y+ ETG LCM+GC  + + + +S     +DC+I +NIQF
Sbjct: 564  KLLSNAS------VEISAEGTYDKETGVLCMIGCSHLTSDDENSAKDSSVDCDILVNIQF 617

Query: 769  RPLNSKSSSYVKGTVESTRGQLDPFYFEKLQLFAVSLSTIQAAESVWRVDLEISMVLISN 590
             PLN+K     KGT++S RG++D  YF +L++ + S+   QA ES+WR+D+EI+MVL+SN
Sbjct: 618  SPLNAKGRDNTKGTIKSMRGKMDSVYFRQLEISSNSIYKSQATESIWRMDMEITMVLVSN 677

Query: 589  TLICIFVGLQVFYVKKNPDVLPSISLVMLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 410
            TL C+FVGLQ+++VKK+PDVLP IS VML                               
Sbjct: 678  TLACVFVGLQLYHVKKHPDVLPFISFVML--IVLTLGYMIPLLLNFEAFFIGNHNRQNIF 735

Query: 409  XXXXXXXXXXXXXXRVVTMVAFLLQFRLLQLTWSSKLGDGDQKVLLLAEKKALFVLLPLY 230
                          RVVTM+AFLLQFRL QL+ S++  DG  K L ++EK+ L++ LPLY
Sbjct: 736  LESGGWLELNEVLVRVVTMIAFLLQFRLFQLSCSARYTDGRHKSLWVSEKRVLYLSLPLY 795

Query: 229  LIGAFVAWGLHWWINHNEAPWRYGSISVYHGHSIWVDLRSYAGLLRDGFLLPQILLNVFS 50
            + G  +AW  H W N   +P+       Y  H  W D++SY G + DGFLLPQI+ NVF 
Sbjct: 796  IGGGLIAWYAHQWRNSYTSPYLRPRHIAYQQHYQWKDIKSYGGFILDGFLLPQIMFNVFL 855

Query: 49   NIKDKALHPAFYVGIT 2
            N K+ +L  +FYVG T
Sbjct: 856  NCKENSLASSFYVGKT 871


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