BLASTX nr result

ID: Coptis24_contig00004669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004669
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253...   162   6e-58
emb|CBI20307.3| unnamed protein product [Vitis vinifera]              154   1e-55
ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245...   154   1e-55
ref|XP_002329822.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-55
emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera]   152   8e-55

>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
          Length = 708

 Score =  162 bits (409), Expect(2) = 6e-58
 Identities = 82/151 (54%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
 Frame = -2

Query: 444 LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
           + P IS+VML +LTLG MIPL+LNFEALF  N NRQN+ +GSGGWLEVNEV+VRVVTM+A
Sbjct: 444 VLPLISIVMLIVLTLGHMIPLLLNFEALFVANRNRQNVFLGSGGWLEVNEVIVRVVTMIA 503

Query: 264 FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAP- 88
           FLLQFR LQLTWSS           ++EKK L++ LPLY  GA +A  +H W N  + P 
Sbjct: 504 FLLQFRLLQLTWSSRSNDGSENALWVSEKKVLYLSLPLYAGGALIAWFVHQWKNSYQIPL 563

Query: 87  --WKYGSISVYHGHSIWVDLR*YAGLLRDGF 1
              +   ++    H++W +L+ YAGL+ DGF
Sbjct: 564 PRTRLAPVNYNQQHALWGELKSYAGLILDGF 594



 Score = 88.6 bits (218), Expect(2) = 6e-58
 Identities = 42/68 (61%), Positives = 53/68 (77%)
 Frame = -1

Query: 646 VKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLICIFVGLQ 467
           VKGTIESTR   D  YF+ L+L + S+   Q AES+WR+DLEI +VLISNT  C+FVGLQ
Sbjct: 375 VKGTIESTRGKSDQLYFQHLELSSSSIYLSQAAESIWRMDLEITLVLISNTFACVFVGLQ 434

Query: 466 VFYVKKNP 443
           +FYVK++P
Sbjct: 435 LFYVKRHP 442


>emb|CBI20307.3| unnamed protein product [Vitis vinifera]
          Length = 1709

 Score =  154 bits (390), Expect(2) = 1e-55
 Identities = 85/157 (54%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
 Frame = -2

Query: 444  LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
            + PSISL+ML ILTLG M+PLVLNFEALF  NH RQN+++ SGGWL+VNEV+VRVVTMV 
Sbjct: 641  VLPSISLLMLVILTLGYMVPLVLNFEALFLQNHARQNVLLESGGWLKVNEVIVRVVTMVV 700

Query: 264  FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPW 85
            FLLQFR LQLTWS+           +AEK AL+V LP Y++G  ++  L      N    
Sbjct: 701  FLLQFRLLQLTWSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSL------NRTKT 754

Query: 84   KYG---------SISVYHGHSIWVDLR*YAGLLRDGF 1
            +YG         S+  Y  HS W DLR YAGL  DGF
Sbjct: 755  EYGAVKGLKASSSLISYQQHSHWQDLRSYAGLTLDGF 791



 Score = 88.2 bits (217), Expect(2) = 1e-55
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = -1

Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
           NSK   ++KGTI+S R   DP YFE L L + S + ++  +S+WR+DLEI MVLISNTL 
Sbjct: 566 NSKKG-HIKGTIKSRREKSDPLYFEHLDLSSTSYTVVEAKQSIWRMDLEIFMVLISNTLS 624

Query: 487 CIFVGLQVFYVKKNP 443
           C+F+GLQ+FYVK  P
Sbjct: 625 CVFLGLQLFYVKNQP 639



 Score =  124 bits (311), Expect = 2e-26
 Identities = 78/182 (42%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
 Frame = -2

Query: 528  IWRSIWF*SLIHLSASLS----GYRSFM*RRI--LFPSISLVMLAILTLGQMIPLVLNFE 367
            IWR  +   ++ +S +LS    G + F  ++   + PSISLVML +LTLG MIPLVLNFE
Sbjct: 1427 IWRMDFEIIMVLISHTLSCVFVGLQLFYVKKHSEVLPSISLVMLVVLTLGYMIPLVLNFE 1486

Query: 366  ALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVAFLLQFRFLQLTWSSXXXXXXXXXXXL 187
            ALF  +H+++N ++ SGGW++ NEV+VR+VTMV FLLQFR LQLTW++            
Sbjct: 1487 ALFLGSHDQRNALLESGGWIKANEVIVRIVTMVVFLLQFRLLQLTWAA------------ 1534

Query: 186  AEKKALFVLLPLYLIGAFVASGLHWWINHNEAPWKYGSISVYHGHSIWVDLR*YAGLLRD 7
                       L   G  +A   +   N   A  +  S+  Y  HS+W DLR YAGL+ D
Sbjct: 1535 ----------KLKEAGCLIALFFNRGKNEYGAAVQSYSLPDYQQHSLWGDLRSYAGLVLD 1584

Query: 6    GF 1
            GF
Sbjct: 1585 GF 1586



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = -1

Query: 667  NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
            NSK+  Y+KG+I+STR   DP YFE L L A S       +S+WR+D EI MVLIS+TL 
Sbjct: 1387 NSKNRGYIKGSIQSTREKSDPLYFEHLDLSANSF--FGARQSIWRMDFEIIMVLISHTLS 1444

Query: 487  CIFVGLQVFYVKKN 446
            C+FVGLQ+FYVKK+
Sbjct: 1445 CVFVGLQLFYVKKH 1458


>ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245140 [Vitis vinifera]
          Length = 946

 Score =  154 bits (390), Expect(2) = 1e-55
 Identities = 85/157 (54%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
 Frame = -2

Query: 444  LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
            + PSISL+ML ILTLG M+PLVLNFEALF  NH RQN+++ SGGWL+VNEV+VRVVTMV 
Sbjct: 684  VLPSISLLMLVILTLGYMVPLVLNFEALFLQNHARQNVLLESGGWLKVNEVIVRVVTMVV 743

Query: 264  FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPW 85
            FLLQFR LQLTWS+           +AEK AL+V LP Y++G  ++  L      N    
Sbjct: 744  FLLQFRLLQLTWSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSL------NRTKT 797

Query: 84   KYG---------SISVYHGHSIWVDLR*YAGLLRDGF 1
            +YG         S+  Y  HS W DLR YAGL  DGF
Sbjct: 798  EYGAVKGLKASSSLISYQQHSHWQDLRSYAGLTLDGF 834



 Score = 88.2 bits (217), Expect(2) = 1e-55
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = -1

Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
           NSK   ++KGTI+S R   DP YFE L L + S + ++  +S+WR+DLEI MVLISNTL 
Sbjct: 609 NSKKG-HIKGTIKSRREKSDPLYFEHLDLSSTSYTVVEAKQSIWRMDLEIFMVLISNTLS 667

Query: 487 CIFVGLQVFYVKKNP 443
           C+F+GLQ+FYVK  P
Sbjct: 668 CVFLGLQLFYVKNQP 682


>ref|XP_002329822.1| predicted protein [Populus trichocarpa] gi|222870884|gb|EEF08015.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  152 bits (385), Expect(2) = 3e-55
 Identities = 76/144 (52%), Positives = 98/144 (68%)
 Frame = -2

Query: 432  ISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVAFLLQ 253
            IS +ML +LTLG MIPL+LNFEALF +N N+QN+ + SGGWLEVNEV VRVV MVAFLL 
Sbjct: 686  ISFMMLLVLTLGHMIPLLLNFEALFLSNRNQQNVFLESGGWLEVNEVAVRVVKMVAFLLI 745

Query: 252  FRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPWKYGS 73
            FR LQLTWS+           ++EK+ L++ LP+Y++G  +A  +H W N + +P     
Sbjct: 746  FRLLQLTWSARPSDGSNKNVWISEKRVLYLSLPMYIVGGLIAWYVHHWKNTSRSPHLLQG 805

Query: 72   ISVYHGHSIWVDLR*YAGLLRDGF 1
              VY  H  W DL+ YAGL+ DGF
Sbjct: 806  HKVYQQHYPWTDLKSYAGLVLDGF 829



 Score = 88.6 bits (218), Expect(2) = 3e-55
 Identities = 41/75 (54%), Positives = 57/75 (76%)
 Frame = -1

Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
           N K    +KGTIES R+  DP +FEKL++ + S+   Q AES+WR+D+EI MVLIS+TL 
Sbjct: 606 NGKGHGNIKGTIESVRKNSDPLHFEKLEISSNSIYRHQAAESIWRMDMEITMVLISSTLA 665

Query: 487 CIFVGLQVFYVKKNP 443
           CI VGLQ+++VK++P
Sbjct: 666 CILVGLQLYHVKRHP 680


>emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera]
          Length = 1269

 Score =  152 bits (383), Expect(2) = 8e-55
 Identities = 83/157 (52%), Positives = 101/157 (64%), Gaps = 9/157 (5%)
 Frame = -2

Query: 444  LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
            + PSISL+ML ILTLG M+PLVLNFEALF  NH RQN+++ SGGWL+VNEV+VRVVTMV 
Sbjct: 1007 VLPSISLLMLVILTLGYMVPLVLNFEALFLQNHARQNVLLESGGWLKVNEVIVRVVTMVV 1066

Query: 264  FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPW 85
            FLLQFR LQLTWS+           +AEK AL+V LP Y++G  ++  +      N    
Sbjct: 1067 FLLQFRLLQLTWSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSJ------NRTKT 1120

Query: 84   KYG---------SISVYHGHSIWVDLR*YAGLLRDGF 1
            +YG         S+  Y  HS W DL  YAGL  DGF
Sbjct: 1121 EYGAVKGLKASSSLISYQQHSHWQDLXSYAGLTLDGF 1157



 Score = 88.2 bits (217), Expect(2) = 8e-55
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = -1

Query: 667  NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
            NSK   ++KGTI+S R   DP YFE L L + S + ++  +S+WR+DLEI MVLISNTL 
Sbjct: 932  NSKKG-HIKGTIKSRREKSDPLYFEHLDLSSTSYTVVEAKQSIWRMDLEIFMVLISNTLS 990

Query: 487  CIFVGLQVFYVKKNP 443
            C+F+GLQ+FYVK  P
Sbjct: 991  CVFLGLQLFYVKNQP 1005


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