BLASTX nr result
ID: Coptis24_contig00004669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004669
(667 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253... 162 6e-58
emb|CBI20307.3| unnamed protein product [Vitis vinifera] 154 1e-55
ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245... 154 1e-55
ref|XP_002329822.1| predicted protein [Populus trichocarpa] gi|2... 152 3e-55
emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera] 152 8e-55
>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
Length = 708
Score = 162 bits (409), Expect(2) = 6e-58
Identities = 82/151 (54%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
Frame = -2
Query: 444 LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
+ P IS+VML +LTLG MIPL+LNFEALF N NRQN+ +GSGGWLEVNEV+VRVVTM+A
Sbjct: 444 VLPLISIVMLIVLTLGHMIPLLLNFEALFVANRNRQNVFLGSGGWLEVNEVIVRVVTMIA 503
Query: 264 FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAP- 88
FLLQFR LQLTWSS ++EKK L++ LPLY GA +A +H W N + P
Sbjct: 504 FLLQFRLLQLTWSSRSNDGSENALWVSEKKVLYLSLPLYAGGALIAWFVHQWKNSYQIPL 563
Query: 87 --WKYGSISVYHGHSIWVDLR*YAGLLRDGF 1
+ ++ H++W +L+ YAGL+ DGF
Sbjct: 564 PRTRLAPVNYNQQHALWGELKSYAGLILDGF 594
Score = 88.6 bits (218), Expect(2) = 6e-58
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = -1
Query: 646 VKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLICIFVGLQ 467
VKGTIESTR D YF+ L+L + S+ Q AES+WR+DLEI +VLISNT C+FVGLQ
Sbjct: 375 VKGTIESTRGKSDQLYFQHLELSSSSIYLSQAAESIWRMDLEITLVLISNTFACVFVGLQ 434
Query: 466 VFYVKKNP 443
+FYVK++P
Sbjct: 435 LFYVKRHP 442
>emb|CBI20307.3| unnamed protein product [Vitis vinifera]
Length = 1709
Score = 154 bits (390), Expect(2) = 1e-55
Identities = 85/157 (54%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Frame = -2
Query: 444 LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
+ PSISL+ML ILTLG M+PLVLNFEALF NH RQN+++ SGGWL+VNEV+VRVVTMV
Sbjct: 641 VLPSISLLMLVILTLGYMVPLVLNFEALFLQNHARQNVLLESGGWLKVNEVIVRVVTMVV 700
Query: 264 FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPW 85
FLLQFR LQLTWS+ +AEK AL+V LP Y++G ++ L N
Sbjct: 701 FLLQFRLLQLTWSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSL------NRTKT 754
Query: 84 KYG---------SISVYHGHSIWVDLR*YAGLLRDGF 1
+YG S+ Y HS W DLR YAGL DGF
Sbjct: 755 EYGAVKGLKASSSLISYQQHSHWQDLRSYAGLTLDGF 791
Score = 88.2 bits (217), Expect(2) = 1e-55
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -1
Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
NSK ++KGTI+S R DP YFE L L + S + ++ +S+WR+DLEI MVLISNTL
Sbjct: 566 NSKKG-HIKGTIKSRREKSDPLYFEHLDLSSTSYTVVEAKQSIWRMDLEIFMVLISNTLS 624
Query: 487 CIFVGLQVFYVKKNP 443
C+F+GLQ+FYVK P
Sbjct: 625 CVFLGLQLFYVKNQP 639
Score = 124 bits (311), Expect = 2e-26
Identities = 78/182 (42%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Frame = -2
Query: 528 IWRSIWF*SLIHLSASLS----GYRSFM*RRI--LFPSISLVMLAILTLGQMIPLVLNFE 367
IWR + ++ +S +LS G + F ++ + PSISLVML +LTLG MIPLVLNFE
Sbjct: 1427 IWRMDFEIIMVLISHTLSCVFVGLQLFYVKKHSEVLPSISLVMLVVLTLGYMIPLVLNFE 1486
Query: 366 ALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVAFLLQFRFLQLTWSSXXXXXXXXXXXL 187
ALF +H+++N ++ SGGW++ NEV+VR+VTMV FLLQFR LQLTW++
Sbjct: 1487 ALFLGSHDQRNALLESGGWIKANEVIVRIVTMVVFLLQFRLLQLTWAA------------ 1534
Query: 186 AEKKALFVLLPLYLIGAFVASGLHWWINHNEAPWKYGSISVYHGHSIWVDLR*YAGLLRD 7
L G +A + N A + S+ Y HS+W DLR YAGL+ D
Sbjct: 1535 ----------KLKEAGCLIALFFNRGKNEYGAAVQSYSLPDYQQHSLWGDLRSYAGLVLD 1584
Query: 6 GF 1
GF
Sbjct: 1585 GF 1586
Score = 85.5 bits (210), Expect = 8e-15
Identities = 43/74 (58%), Positives = 54/74 (72%)
Frame = -1
Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
NSK+ Y+KG+I+STR DP YFE L L A S +S+WR+D EI MVLIS+TL
Sbjct: 1387 NSKNRGYIKGSIQSTREKSDPLYFEHLDLSANSF--FGARQSIWRMDFEIIMVLISHTLS 1444
Query: 487 CIFVGLQVFYVKKN 446
C+FVGLQ+FYVKK+
Sbjct: 1445 CVFVGLQLFYVKKH 1458
>ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245140 [Vitis vinifera]
Length = 946
Score = 154 bits (390), Expect(2) = 1e-55
Identities = 85/157 (54%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Frame = -2
Query: 444 LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
+ PSISL+ML ILTLG M+PLVLNFEALF NH RQN+++ SGGWL+VNEV+VRVVTMV
Sbjct: 684 VLPSISLLMLVILTLGYMVPLVLNFEALFLQNHARQNVLLESGGWLKVNEVIVRVVTMVV 743
Query: 264 FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPW 85
FLLQFR LQLTWS+ +AEK AL+V LP Y++G ++ L N
Sbjct: 744 FLLQFRLLQLTWSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSL------NRTKT 797
Query: 84 KYG---------SISVYHGHSIWVDLR*YAGLLRDGF 1
+YG S+ Y HS W DLR YAGL DGF
Sbjct: 798 EYGAVKGLKASSSLISYQQHSHWQDLRSYAGLTLDGF 834
Score = 88.2 bits (217), Expect(2) = 1e-55
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -1
Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
NSK ++KGTI+S R DP YFE L L + S + ++ +S+WR+DLEI MVLISNTL
Sbjct: 609 NSKKG-HIKGTIKSRREKSDPLYFEHLDLSSTSYTVVEAKQSIWRMDLEIFMVLISNTLS 667
Query: 487 CIFVGLQVFYVKKNP 443
C+F+GLQ+FYVK P
Sbjct: 668 CVFLGLQLFYVKNQP 682
>ref|XP_002329822.1| predicted protein [Populus trichocarpa] gi|222870884|gb|EEF08015.1|
predicted protein [Populus trichocarpa]
Length = 949
Score = 152 bits (385), Expect(2) = 3e-55
Identities = 76/144 (52%), Positives = 98/144 (68%)
Frame = -2
Query: 432 ISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVAFLLQ 253
IS +ML +LTLG MIPL+LNFEALF +N N+QN+ + SGGWLEVNEV VRVV MVAFLL
Sbjct: 686 ISFMMLLVLTLGHMIPLLLNFEALFLSNRNQQNVFLESGGWLEVNEVAVRVVKMVAFLLI 745
Query: 252 FRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPWKYGS 73
FR LQLTWS+ ++EK+ L++ LP+Y++G +A +H W N + +P
Sbjct: 746 FRLLQLTWSARPSDGSNKNVWISEKRVLYLSLPMYIVGGLIAWYVHHWKNTSRSPHLLQG 805
Query: 72 ISVYHGHSIWVDLR*YAGLLRDGF 1
VY H W DL+ YAGL+ DGF
Sbjct: 806 HKVYQQHYPWTDLKSYAGLVLDGF 829
Score = 88.6 bits (218), Expect(2) = 3e-55
Identities = 41/75 (54%), Positives = 57/75 (76%)
Frame = -1
Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
N K +KGTIES R+ DP +FEKL++ + S+ Q AES+WR+D+EI MVLIS+TL
Sbjct: 606 NGKGHGNIKGTIESVRKNSDPLHFEKLEISSNSIYRHQAAESIWRMDMEITMVLISSTLA 665
Query: 487 CIFVGLQVFYVKKNP 443
CI VGLQ+++VK++P
Sbjct: 666 CILVGLQLYHVKRHP 680
>emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera]
Length = 1269
Score = 152 bits (383), Expect(2) = 8e-55
Identities = 83/157 (52%), Positives = 101/157 (64%), Gaps = 9/157 (5%)
Frame = -2
Query: 444 LFPSISLVMLAILTLGQMIPLVLNFEALFKTNHNRQNIVMGSGGWLEVNEVLVRVVTMVA 265
+ PSISL+ML ILTLG M+PLVLNFEALF NH RQN+++ SGGWL+VNEV+VRVVTMV
Sbjct: 1007 VLPSISLLMLVILTLGYMVPLVLNFEALFLQNHARQNVLLESGGWLKVNEVIVRVVTMVV 1066
Query: 264 FLLQFRFLQLTWSSXXXXXXXXXXXLAEKKALFVLLPLYLIGAFVASGLHWWINHNEAPW 85
FLLQFR LQLTWS+ +AEK AL+V LP Y++G ++ + N
Sbjct: 1067 FLLQFRLLQLTWSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSJ------NRTKT 1120
Query: 84 KYG---------SISVYHGHSIWVDLR*YAGLLRDGF 1
+YG S+ Y HS W DL YAGL DGF
Sbjct: 1121 EYGAVKGLKASSSLISYQQHSHWQDLXSYAGLTLDGF 1157
Score = 88.2 bits (217), Expect(2) = 8e-55
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -1
Query: 667 NSKSSSYVKGTIESTRRWLDPFYFEKLQLFAVSLSTIQVAESVWRVDLEINMVLISNTLI 488
NSK ++KGTI+S R DP YFE L L + S + ++ +S+WR+DLEI MVLISNTL
Sbjct: 932 NSKKG-HIKGTIKSRREKSDPLYFEHLDLSSTSYTVVEAKQSIWRMDLEIFMVLISNTLS 990
Query: 487 CIFVGLQVFYVKKNP 443
C+F+GLQ+FYVK P
Sbjct: 991 CVFLGLQLFYVKNQP 1005