BLASTX nr result

ID: Coptis24_contig00004659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004659
         (1803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563805.1| uncharacterized protein [Arabidopsis thaliana] ...   402   e-144
ref|XP_002314280.1| predicted protein [Populus trichocarpa] gi|2...   400   e-144
ref|XP_002892430.1| hypothetical protein ARALYDRAFT_888027 [Arab...   395   e-142
ref|XP_002529935.1| conserved hypothetical protein [Ricinus comm...   393   e-142
ref|XP_002880936.1| hypothetical protein ARALYDRAFT_481676 [Arab...   389   e-141

>ref|NP_563805.1| uncharacterized protein [Arabidopsis thaliana]
            gi|79317279|ref|NP_001030994.1| uncharacterized protein
            [Arabidopsis thaliana] gi|15810567|gb|AAL07171.1|
            putative storage protein [Arabidopsis thaliana]
            gi|20259569|gb|AAM14127.1| putative storage protein
            [Arabidopsis thaliana] gi|332190112|gb|AEE28233.1|
            uncharacterized protein [Arabidopsis thaliana]
            gi|332190113|gb|AEE28234.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 382

 Score =  402 bits (1033), Expect(2) = e-144
 Identities = 187/276 (67%), Positives = 224/276 (81%)
 Frame = -2

Query: 1520 MGTPYRSGPHKKSNDSARLVITAXXXXXXXXXXXXXXXXXXVNKFNLRSGLLTSRVVSLV 1341
            MGT +RSG  +++N++A+L+IT                     K +L SGL++S  V++ 
Sbjct: 1    MGTMHRSGAPRRTNENAKLIITTIVGVVFGFFVGITLPLGSFRKISLPSGLMSSLDVAM- 59

Query: 1340 DDNRSFRDIQLKHDLNSSRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDL 1161
             D + F   +   D+ S R S K+YV TNP GAE LPPGI+V++TD YLRRLWG+P+EDL
Sbjct: 60   SDGKLFSGGRSPEDIGS-RKSPKIYVPTNPHGAELLPPGIIVAETDFYLRRLWGEPSEDL 118

Query: 1160 KTRPKYLVTFTVGFNQKNNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVK 981
            K +PKYLVTFTVGF Q+NNI+AAVKKFSEDF ILLFHYDGRT+EWDQFEW+K AIH+S K
Sbjct: 119  KKKPKYLVTFTVGFEQRNNINAAVKKFSEDFQILLFHYDGRTTEWDQFEWSKNAIHISAK 178

Query: 980  KQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNN 801
            KQTKWWYAKRFLHPDVV+AY+YIFIWDEDLGVEHFNA++Y++LVKKHGLEISQPGLEPNN
Sbjct: 179  KQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKKHGLEISQPGLEPNN 238

Query: 800  GLTWQMTKRRGDSEVHKETEEKPGWCSDPHLPPCAA 693
            GLTW+MTKRRGD +VHKET+EKPGWCSDPHLPPCAA
Sbjct: 239  GLTWEMTKRRGDRDVHKETKEKPGWCSDPHLPPCAA 274



 Score =  139 bits (349), Expect(2) = e-144
 Identities = 69/127 (54%), Positives = 79/127 (62%)
 Frame = -3

Query: 610 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSXXXXXXXXX 431
           FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS         
Sbjct: 275 FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS--------- 325

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPWEGVRERCQSEWTEFRNRLADA 251
                                              K+PW+GVRERC++EWT F+NR+A+A
Sbjct: 326 ---------------QWIIHQVIPSLGSQGESEEGKSPWQGVRERCRNEWTMFQNRVAEA 370

Query: 250 EKKYFAQ 230
           +K Y  Q
Sbjct: 371 DKAYMEQ 377


>ref|XP_002314280.1| predicted protein [Populus trichocarpa] gi|222850688|gb|EEE88235.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  400 bits (1027), Expect(2) = e-144
 Identities = 185/276 (67%), Positives = 219/276 (79%)
 Frame = -2

Query: 1520 MGTPYRSGPHKKSNDSARLVITAXXXXXXXXXXXXXXXXXXVNKFNLRSGLLTSRVVSLV 1341
            MGT +RSG ++K+NDSARL+I                      K ++ S    S  +S+V
Sbjct: 1    MGTIHRSGVYRKTNDSARLIIVTIVGVAFGFFVGISFPAVTFTKIHIHSSFTLSLDISIV 60

Query: 1340 DDNRSFRDIQLKHDLNSSRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDL 1161
            + N  FR  +    L S  + + +YV TNPRGAE LPPGIVV+++D YLRRLWG+P+ED+
Sbjct: 61   NQNE-FRRSKSLETLGSGSNVTNIYVPTNPRGAELLPPGIVVAESDFYLRRLWGEPSEDM 119

Query: 1160 KTRPKYLVTFTVGFNQKNNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVK 981
              +PKYL+TFTVG++Q+NNI+AAVKKFS+DF ILLFHYDGRTSEWDQFEW+K AIHVS+ 
Sbjct: 120  LKKPKYLLTFTVGYDQRNNINAAVKKFSDDFQILLFHYDGRTSEWDQFEWSKSAIHVSIM 179

Query: 980  KQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNN 801
            +QTKWWYAKRFLHPD+V AY+YIFIWDEDLGVEHFN EKYIQL+KKHGLEISQPGLEPNN
Sbjct: 180  RQTKWWYAKRFLHPDIVGAYEYIFIWDEDLGVEHFNGEKYIQLIKKHGLEISQPGLEPNN 239

Query: 800  GLTWQMTKRRGDSEVHKETEEKPGWCSDPHLPPCAA 693
            GLTWQMTKRRGD EVHK+TEEKPGWCSDPHLPPCAA
Sbjct: 240  GLTWQMTKRRGDREVHKDTEEKPGWCSDPHLPPCAA 275



 Score =  140 bits (354), Expect(2) = e-144
 Identities = 72/130 (55%), Positives = 80/130 (61%)
 Frame = -3

Query: 610 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSXXXXXXXXX 431
           FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS         
Sbjct: 276 FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS--------- 326

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPWEGVRERCQSEWTEFRNRLADA 251
                                              KAPWEGVR RC++EW+ FR+RLADA
Sbjct: 327 ---------------QWIIHQVIPSLGSQGKSEKGKAPWEGVRARCRNEWSLFRSRLADA 371

Query: 250 EKKYFAQVGK 221
           E+ Y +Q  K
Sbjct: 372 EQAYISQTKK 381


>ref|XP_002892430.1| hypothetical protein ARALYDRAFT_888027 [Arabidopsis lyrata subsp.
            lyrata] gi|297338272|gb|EFH68689.1| hypothetical protein
            ARALYDRAFT_888027 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score =  395 bits (1015), Expect(2) = e-142
 Identities = 185/276 (67%), Positives = 221/276 (80%)
 Frame = -2

Query: 1520 MGTPYRSGPHKKSNDSARLVITAXXXXXXXXXXXXXXXXXXVNKFNLRSGLLTSRVVSLV 1341
            MGT +RSG  +++N++A+L+IT                     K +L SGL++S  V++ 
Sbjct: 1    MGTMHRSGAPRRTNENAKLIITTIVGMVFGFFVGITLPLGAFRKISLPSGLISSLDVAM- 59

Query: 1340 DDNRSFRDIQLKHDLNSSRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDL 1161
             D + F   +   D  S R S K+YV TNP GAE LPPGI+V++TD YLRRLWG+P+EDL
Sbjct: 60   SDGKLFSGGRSPEDFGS-RKSPKIYVPTNPHGAELLPPGIIVAETDFYLRRLWGEPSEDL 118

Query: 1160 KTRPKYLVTFTVGFNQKNNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVK 981
            K +PKYLVTFTVG  Q+NNI+AAV KFSEDF ILLFHYDGRT+EWDQFEW+K AIH+S K
Sbjct: 119  KKKPKYLVTFTVGLEQRNNINAAVLKFSEDFQILLFHYDGRTTEWDQFEWSKNAIHISAK 178

Query: 980  KQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNN 801
            KQTKWWYAKRFLHPDVV+AY+YIFIWDEDLGV+HFNA++YI+LVKKHGLEISQPGLEPNN
Sbjct: 179  KQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVKHFNADRYIELVKKHGLEISQPGLEPNN 238

Query: 800  GLTWQMTKRRGDSEVHKETEEKPGWCSDPHLPPCAA 693
            GLTW+MTKRRGD +VHKET+EKPGWCSDPHLPPCAA
Sbjct: 239  GLTWEMTKRRGDRDVHKETKEKPGWCSDPHLPPCAA 274



 Score =  137 bits (345), Expect(2) = e-142
 Identities = 68/127 (53%), Positives = 79/127 (62%)
 Frame = -3

Query: 610 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSXXXXXXXXX 431
           FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS         
Sbjct: 275 FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS--------- 325

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPWEGVRERCQSEWTEFRNRLADA 251
                                              K+PW+GVRERC++EW+ F+NR+A+A
Sbjct: 326 ---------------QWIIHQVIPSLGSQGESEKGKSPWQGVRERCRNEWSMFQNRVAEA 370

Query: 250 EKKYFAQ 230
           +K Y  Q
Sbjct: 371 DKAYMEQ 377


>ref|XP_002529935.1| conserved hypothetical protein [Ricinus communis]
            gi|223530565|gb|EEF32443.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 368

 Score =  393 bits (1009), Expect(2) = e-142
 Identities = 183/276 (66%), Positives = 218/276 (78%)
 Frame = -2

Query: 1520 MGTPYRSGPHKKSNDSARLVITAXXXXXXXXXXXXXXXXXXVNKFNLRSGLLTSRVVSLV 1341
            MG+ +RSG  +K+NDSARL++T                   + K ++ SG ++S  +S  
Sbjct: 1    MGSIHRSGLSRKTNDSARLIVTTILGVVFGFFVGISFPSVSLTKIHIPSGFISSTDMSST 60

Query: 1340 DDNRSFRDIQLKHDLNSSRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDL 1161
            D N                ++ K+Y   NPRGAE LPPGIVVS++D YLRRLWG+P+EDL
Sbjct: 61   DQN-------------IRGNAPKIYAPRNPRGAELLPPGIVVSESDFYLRRLWGEPSEDL 107

Query: 1160 KTRPKYLVTFTVGFNQKNNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVK 981
            K +PKYLVTFTVG++Q+NNI+AA+KKFS+DFTILLFHYDGR SEWDQFEW++ AIHVSV+
Sbjct: 108  KKKPKYLVTFTVGYDQRNNINAAIKKFSDDFTILLFHYDGRVSEWDQFEWSRTAIHVSVR 167

Query: 980  KQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNN 801
            +QTKWWYAKRFLHPD+VAAY+YIFIWDEDLGVEHFNA+KYI+LVKKHGLEISQPGLEPNN
Sbjct: 168  RQTKWWYAKRFLHPDIVAAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEPNN 227

Query: 800  GLTWQMTKRRGDSEVHKETEEKPGWCSDPHLPPCAA 693
            GLTWQMTKRRGD EVHK+TEEKPGWCSDP LPPCAA
Sbjct: 228  GLTWQMTKRRGDKEVHKDTEEKPGWCSDPRLPPCAA 263



 Score =  139 bits (351), Expect(2) = e-142
 Identities = 69/128 (53%), Positives = 80/128 (62%)
 Frame = -3

Query: 610 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSXXXXXXXXX 431
           FVEIMAPVFS++AWRCVWHM+QNDLVHGWGLDFALRRCVEPAHEKIGVVDS         
Sbjct: 264 FVEIMAPVFSREAWRCVWHMVQNDLVHGWGLDFALRRCVEPAHEKIGVVDS--------- 314

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPWEGVRERCQSEWTEFRNRLADA 251
                                              KAPWEGVR RC++EW+ F++RLADA
Sbjct: 315 ---------------QWIIHQVIPSLGNQGKSEKGKAPWEGVRARCKNEWSMFQSRLADA 359

Query: 250 EKKYFAQV 227
           +K Y +Q+
Sbjct: 360 DKAYLSQI 367


>ref|XP_002880936.1| hypothetical protein ARALYDRAFT_481676 [Arabidopsis lyrata subsp.
            lyrata] gi|297326775|gb|EFH57195.1| hypothetical protein
            ARALYDRAFT_481676 [Arabidopsis lyrata subsp. lyrata]
          Length = 381

 Score =  389 bits (998), Expect(2) = e-141
 Identities = 184/276 (66%), Positives = 217/276 (78%)
 Frame = -2

Query: 1520 MGTPYRSGPHKKSNDSARLVITAXXXXXXXXXXXXXXXXXXVNKFNLRSGLLTSRVVSLV 1341
            MGT +RSG  +++N++A+++IT                     K NL S L++S  V++ 
Sbjct: 1    MGTMHRSGAPRRTNENAKVIITTILGIVFGTFIGITLPSLSF-KINLPSRLISSLDVAIS 59

Query: 1340 DDNRSFRDIQLKHDLNSSRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDL 1161
            D        +   D  S R   ++YV TNPRGAE LPPGIVV+KTD YLRRLWG+PNEDL
Sbjct: 60   DGKLLSGGDKSPEDFGS-RKFPEIYVPTNPRGAELLPPGIVVAKTDFYLRRLWGEPNEDL 118

Query: 1160 KTRPKYLVTFTVGFNQKNNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVK 981
            K +PKYLVTFTVGF Q+N+I+  VKKFSEDF ILLFHYDGRT+EWDQFEW+K AIH+S +
Sbjct: 119  KKKPKYLVTFTVGFEQRNHINGVVKKFSEDFQILLFHYDGRTTEWDQFEWSKSAIHISTR 178

Query: 980  KQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNN 801
            KQTKWWYAKRFLHPDVV+AY+YIFIWDEDLGVEHFNA+KYI+LVKKHGLEISQPGLEPNN
Sbjct: 179  KQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEPNN 238

Query: 800  GLTWQMTKRRGDSEVHKETEEKPGWCSDPHLPPCAA 693
            GLTW+MTKRRGD EVHK+T+EKPGWC DPHLPPCAA
Sbjct: 239  GLTWEMTKRRGDREVHKDTKEKPGWCKDPHLPPCAA 274



 Score =  142 bits (359), Expect(2) = e-141
 Identities = 72/130 (55%), Positives = 81/130 (62%)
 Frame = -3

Query: 610 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSXXXXXXXXX 431
           FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS         
Sbjct: 275 FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS--------- 325

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPWEGVRERCQSEWTEFRNRLADA 251
                                              KAPW+GVRERC+ EWT F+NRLADA
Sbjct: 326 ---------------QWIIHKVIPSLGSQGKSENGKAPWQGVRERCKMEWTMFQNRLADA 370

Query: 250 EKKYFAQVGK 221
           +K+Y  ++ K
Sbjct: 371 DKEYLGRMVK 380


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