BLASTX nr result

ID: Coptis24_contig00004655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004655
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268547.2| PREDICTED: putative disease resistance prote...   156   3e-36
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...   153   2e-35
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   152   3e-35
emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera]   152   5e-35
ref|XP_002268266.2| PREDICTED: putative disease resistance prote...   151   9e-35

>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score =  156 bits (394), Expect = 3e-36
 Identities = 86/181 (47%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
 Frame = -2

Query: 579 DDVLDEWNTRILI----SANGSHVTNRVRSYLLSLCACFKHVGVRHDIAHRIKGIREGLD 412
           DDV+DEW+T IL      A  + ++ +V S + S C C K V  R DIA ++K I++ LD
Sbjct: 77  DDVVDEWSTAILQLQIKGAESASMSKKVSSCIPSPCFCLKQVASRRDIALKVKSIKQQLD 136

Query: 411 VIALSKDQLSLVQSHSHEEEPRQLTNSGVDVMDIYGRDFDKQKILSMLLCETSQQETRIH 232
           VIA  + Q + + S S EE  R +T S +D+ ++YGRD DK  IL  LL ET Q ET+  
Sbjct: 137 VIASQRSQFNFISSLS-EEPQRFITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSG 194

Query: 231 VPILSLVGTGGFGKTTLAQLVFNEETIVTTFELKIWVCVSEPFDLIRVAREIIEQATGKN 52
             I+S+VGTGG GKTTLAQL +N   +   F+ +IWVCVS+PFD IR+ REI+E   G++
Sbjct: 195 PYIISIVGTGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQGES 254

Query: 51  P 49
           P
Sbjct: 255 P 255


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score =  153 bits (387), Expect = 2e-35
 Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
 Frame = -2

Query: 579 DDVLDEWNTRILI-----SANGSHVTNRVRSYLLSLCACFKHVGVRHDIAHRIKGIREGL 415
           DDV+DEW+T IL      + + S    +V S + S C C K V  R DIA ++K I++ L
Sbjct: 77  DDVVDEWSTAILQLQIKGAESASMSKKKVSSCIPSPCFCLKQVASRRDIALKVKSIKQQL 136

Query: 414 DVIALSKDQLSLVQSHSHEEEPRQLTNSGVDVMDIYGRDFDKQKILSMLLCETSQQETRI 235
           DVIA  + Q + + S S EE  R +T S +D+ ++YGRD DK  IL  LL ET Q ET+ 
Sbjct: 137 DVIASQRSQFNFISSLS-EEPQRFITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKS 194

Query: 234 HVPILSLVGTGGFGKTTLAQLVFNEETIVTTFELKIWVCVSEPFDLIRVAREIIEQATGK 55
              I+S+VGTGG GKTTLAQL +N   +   F+ +IWVCVS+PFD IR+ REI+E   G+
Sbjct: 195 GPYIISIVGTGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQGE 254

Query: 54  NP 49
           +P
Sbjct: 255 SP 256


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score =  152 bits (385), Expect = 3e-35
 Identities = 87/182 (47%), Positives = 115/182 (63%), Gaps = 5/182 (2%)
 Frame = -2

Query: 579 DDVLDEWNTRILI-----SANGSHVTNRVRSYLLSLCACFKHVGVRHDIAHRIKGIREGL 415
           DDV+DEW+T IL      + + S    +V S + S C C K V  R DIA +IKGI++ L
Sbjct: 77  DDVVDEWSTAILQLQIKGAESASMSKKKVSSCIPSPCFCLKQVASRRDIALKIKGIKQQL 136

Query: 414 DVIALSKDQLSLVQSHSHEEEPRQLTNSGVDVMDIYGRDFDKQKILSMLLCETSQQETRI 235
           DVIA  + Q + + S S EE  R +T S +D+ ++YGRD DK  IL  LL ET Q ET  
Sbjct: 137 DVIASQRSQFNFISSLS-EEPQRFITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETES 194

Query: 234 HVPILSLVGTGGFGKTTLAQLVFNEETIVTTFELKIWVCVSEPFDLIRVAREIIEQATGK 55
              I+S+VGTGG GKTTLAQL +N   +   F+ +IWVCVS+PFD IR+ REI+E    +
Sbjct: 195 GPHIISIVGTGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQRE 254

Query: 54  NP 49
           +P
Sbjct: 255 SP 256


>emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera]
          Length = 541

 Score =  152 bits (383), Expect = 5e-35
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
 Frame = -2

Query: 579 DDVLDEWNTRILI-----SANGSHVTNRVRSYLLSLCACFKHVGVRHDIAHRIKGIREGL 415
           DDVLDEW+T IL      + N S  TN+V S + S C CFK V  R DIA +IK +++ L
Sbjct: 77  DDVLDEWSTAILQLQMEGAENASMSTNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQL 136

Query: 414 DVIALSKDQLSLVQSHSHEEEPRQLTNSGVDVMDIYGRDFDKQKILSMLLCETSQQETRI 235
           DVI   + + + + S + E + R +T S +DV ++YGRD D   IL  LL E  ++++R+
Sbjct: 137 DVIGSERTRFNFISSGTQEPQ-RLITTSAIDVSEVYGRDTDVNAILGRLLGENDEEKSRL 195

Query: 234 HVPILSLVGTGGFGKTTLAQLVFNEETIVTTFELKIWVCVSEPFDLIRVAREIIE 70
           +  I+++VGTGG GKTTLAQL +N   +   F+ +IWVCVS+PFD IRV R I+E
Sbjct: 196 Y--IIAIVGTGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRVCRAIVE 248


>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 932

 Score =  151 bits (381), Expect = 9e-35
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
 Frame = -2

Query: 579 DDVLDEWNTRILI-----SANGSHVTNRVRSYLLSLCACFKHVGVRHDIAHRIKGIREGL 415
           DDVLDEW+T IL      + N S   N+V S + S C CFK V  R DIA +IK +++ L
Sbjct: 77  DDVLDEWSTAILQLQMEGAENASMSKNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQL 136

Query: 414 DVIALSKDQLSLVQSHSHEEEPRQLTNSGVDVMDIYGRDFDKQKILSMLLCETSQQETRI 235
           DVIA  + + + + S + E + R +T S +DV ++YGRD D   IL  LL E  ++++R+
Sbjct: 137 DVIASERTRFNFISSGTQEPQ-RLITTSAIDVSEVYGRDTDVNAILGRLLGENDEEKSRL 195

Query: 234 HVPILSLVGTGGFGKTTLAQLVFNEETIVTTFELKIWVCVSEPFDLIRVAREIIE 70
           +  I+++VGTGG GKTTLAQL +N   +   F+ +IWVCVS+PFD IRV R I+E
Sbjct: 196 Y--IIAIVGTGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRVCRAIVE 248


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