BLASTX nr result
ID: Coptis24_contig00004650
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004650
(2215 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631380.1| PREDICTED: LOW QUALITY PROTEIN: protein NLP7... 543 e-151
ref|XP_002518861.1| transcription factor, putative [Ricinus comm... 540 e-151
ref|XP_002303671.1| predicted protein [Populus trichocarpa] gi|2... 507 e-141
ref|XP_004165968.1| PREDICTED: protein NLP6-like [Cucumis sativus] 499 e-138
ref|XP_004149006.1| PREDICTED: protein NLP6-like [Cucumis sativus] 499 e-138
>ref|XP_003631380.1| PREDICTED: LOW QUALITY PROTEIN: protein NLP7-like [Vitis vinifera]
Length = 982
Score = 543 bits (1398), Expect = e-151
Identities = 314/614 (51%), Positives = 386/614 (62%), Gaps = 10/614 (1%)
Frame = +1
Query: 1 CSEHHLQKGQGVGGRAXXXXXXXXXXDITQFSKTQYPLVHYARMFGLSSCFAICLRSAYT 180
C+EHHLQKGQGV GRA +ITQF KT+YPLVHYARMFGL+ CFAICLRS +T
Sbjct: 389 CAEHHLQKGQGVAGRAFESHNSCYCSNITQFCKTEYPLVHYARMFGLTCCFAICLRSTHT 448
Query: 181 GCDDYILEFFLPPGITALSKQLIFLDSVLVTMKQHYRSLKVASG-DXXXXXXXXXXXXXX 357
G DDYILEFFLPP IT Q LDS+L TMKQH++SL+VASG +
Sbjct: 449 GNDDYILEFFLPPSITDSRDQQTLLDSLLATMKQHFQSLRVASGKEFEEEEKSVEIIKLP 508
Query: 358 XDKNLTSRFQCIQISPRVTSPPNPNGLLEQGSSLQPSFEKHSMVEAGDPGK--ENIAVCS 531
+ L SR + IQIS SPP P+ L +G Q KH ++ D K EN+
Sbjct: 509 MNGKLDSRLESIQISQSTPSPPGPDILPSRGEMQQLDSTKHQLMVEFDAIKDRENVVGAG 568
Query: 532 SRSHTAAISENKDTKKTLDKRKGKTEKFISLEVLQQYFAGSLKDAAKSLGVCPTTMKRIC 711
+ + NK+ +K ++++GKTEK ISLEVLQQYFAGSLKDAAKSLGVCPTTMKRIC
Sbjct: 569 VSQNAVSFPGNKEIRKPSERKRGKTEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRIC 628
Query: 712 RHHGISRWPSRKINKVNRSLSKLNHVIQSVQGAEGAFNXXXXXXXXXXISVGSISWPVCL 891
R HGISRWPSRKINKVNRSLSKL VI+SVQ +E AF ++VGS
Sbjct: 629 RQHGISRWPSRKINKVNRSLSKLKRVIESVQVSERAFGLTSLTSSPLPVAVGS------- 681
Query: 892 NGPREQHSLGPKLSELHRGKETYGPTLGTPEFNHHDKIGNKIVERGDVFAHQEEQLHRPM 1071
S +G+++ PT TP + + + E G + +E +H
Sbjct: 682 ------------KSAEPQGEKSGSPTCRTPGSDGQAETAAQFHEGGR--SSHKELIHEQS 727
Query: 1072 GLLSEFGNGSSNPKT-SGSGGESTETPTSHGSCQDSPTNETTCTDDIFVSSIQAQVEKSL 1248
G L E G G++ KT SGS ES TPTSHGSCQ SP NETT + S I Q EK++
Sbjct: 728 GCLPELGKGATGSKTRSGSREESAGTPTSHGSCQGSPENETTSAKNHSNSPIYDQCEKAV 787
Query: 1249 -GLQS--QPNEQLTLCSAYSIPDTPFKTKQHPVLGGMLIEDAGSSKDLRNLSNFVSEGCL 1419
GL+S QP E L+L +A+SIP+ T+ GGMLIEDAGSSKDLRNL V++ L
Sbjct: 788 GGLESAFQPRE-LSLSAAFSIPEALITTEPQTHFGGMLIEDAGSSKDLRNLCPSVADAML 846
Query: 1420 EEWDQESSWKNYSCPDQVPQQEMAPTANT---ITATQDTMTLTVKVNHRDDIIRFRLPIT 1590
+E ESSW N C D P+ M A+T ITA D T+T+K +RDDIIRFR+P+T
Sbjct: 847 DERVPESSWTNPPCSDIPPKHTMNAVAHTIPQITARPDVRTMTIKATYRDDIIRFRIPLT 906
Query: 1591 SGLQDLKEEVAKRFKLEVGTFDLKYLDDDHDLVSLACETDLQECLEISKVSGKRVIRLSV 1770
SG+ +LKEEVAKR KLEVGTFD+KYLDDDH+ V +AC DLQEC++IS +G +IRL V
Sbjct: 907 SGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACNADLQECMDISWTTGSNIIRLLV 966
Query: 1771 HEIMANLGSSSASS 1812
++M NLGSS S+
Sbjct: 967 QDLMTNLGSSCEST 980
>ref|XP_002518861.1| transcription factor, putative [Ricinus communis]
gi|223541848|gb|EEF43394.1| transcription factor,
putative [Ricinus communis]
Length = 1003
Score = 540 bits (1390), Expect = e-151
Identities = 307/612 (50%), Positives = 385/612 (62%), Gaps = 8/612 (1%)
Frame = +1
Query: 1 CSEHHLQKGQGVGGRAXXXXXXXXXXDITQFSKTQYPLVHYARMFGLSSCFAICLRSAYT 180
C EHHLQKGQGV GRA DITQF KT+YPLVHYAR+FGL+ CFAICLRS+YT
Sbjct: 395 CLEHHLQKGQGVAGRAFLSHNACFCQDITQFCKTEYPLVHYARLFGLTGCFAICLRSSYT 454
Query: 181 GCDDYILEFFLPPGITALSKQLIFLDSVLVTMKQHYRSLKVASG-DXXXXXXXXXXXXXX 357
G DDY+LEFFLPP I+ +Q L S+L TMKQH++SL VASG D
Sbjct: 455 GDDDYVLEFFLPPTISDSYEQKSLLGSLLATMKQHFQSLNVASGMDLKEEEGFVEIIQTS 514
Query: 358 XDKNLTSRFQCIQISPRVTSPPNPNGLLEQGSSLQPSFEKHSMV---EAGDPGKENIAVC 528
L R +CIQI SPPN N + G P KH ++ + D G NI
Sbjct: 515 TSGRLDLRLECIQIPQSPNSPPNTNTFPKDGHVTLPHSSKHPLMVDLDVVDNGG-NIGHA 573
Query: 529 SSRSHTAAISENKDTKKTLDKRKGKTEKFISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI 708
+ ENK T+K +K++GK EK ISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI
Sbjct: 574 EGTHTSPPPVENKGTRKPSEKKRGKAEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI 633
Query: 709 CRHHGISRWPSRKINKVNRSLSKLNHVIQSVQGAEGAFNXXXXXXXXXXISVGSISWPVC 888
CR HGISRWPSRKINKVNRSL+KL VI+SVQGAEGAF+ ++VGSISWP
Sbjct: 634 CRQHGISRWPSRKINKVNRSLTKLKRVIESVQGAEGAFDLTPLATSPLPVAVGSISWPSN 693
Query: 889 LNGPREQHSLGPKLSELHRGKETYGPTLGTPEFNHHDKIGNKIVERGDVFAHQEEQLHRP 1068
LNG +Q+S K E H G++ P TPE + ++++ V +E+L +
Sbjct: 694 LNGCNQQNSPNCKSPEPH-GEKNGSPICKTPESDGRTGAVDQLL---GVRILSQEELAQQ 749
Query: 1069 MGLLSEFGNGSSNPKT-SGSGGESTETPTSHGSCQDSPTNETTCTDDIFVSSIQAQVEKS 1245
G E G G+ K SGS ES TPTS+GSCQ SP N++ D VS + Q K+
Sbjct: 750 NGFPPELGQGAKRIKAGSGSREESVGTPTSNGSCQGSPANDSMPAKDASVSPVHKQCIKA 809
Query: 1246 LG---LQSQPNEQLTLCSAYSIPDTPFKTKQHPVLGGMLIEDAGSSKDLRNLSNFVSEGC 1416
G L Q +L L +AYSIPD T+ G ML+E AGSSKDLRNL +++
Sbjct: 810 GGSPELAFQAKGELNLAAAYSIPDVLVATEAREPFGEMLLEGAGSSKDLRNLCPSIADAF 869
Query: 1417 LEEWDQESSWKNYSCPDQVPQQEMAPTANTITATQDTMTLTVKVNHRDDIIRFRLPITSG 1596
L+E E+SW N+ C + Q M + I + Q+ ++T+K +R+DIIRFR+ ++SG
Sbjct: 870 LDERIPETSWTNHPCQNLPSTQTMVALESAI-SLQEIKSVTIKATYREDIIRFRISLSSG 928
Query: 1597 LQDLKEEVAKRFKLEVGTFDLKYLDDDHDLVSLACETDLQECLEISKVSGKRVIRLSVHE 1776
+ +LKEEVAKR KLEVGTFD+KYLDDDH+ V +AC+ DLQEC++IS+ SG +IRLSVH+
Sbjct: 929 IVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECIDISRSSGSNIIRLSVHD 988
Query: 1777 IMANLGSSSASS 1812
+ NLGSS S+
Sbjct: 989 MNVNLGSSCEST 1000
>ref|XP_002303671.1| predicted protein [Populus trichocarpa] gi|222841103|gb|EEE78650.1|
predicted protein [Populus trichocarpa]
Length = 953
Score = 507 bits (1305), Expect = e-141
Identities = 298/610 (48%), Positives = 359/610 (58%), Gaps = 6/610 (0%)
Frame = +1
Query: 1 CSEHHLQKGQGVGGRAXXXXXXXXXXDITQFSKTQYPLVHYARMFGLSSCFAICLRSAYT 180
C EHHLQKGQGV GRA DITQF KT+YPLVHYARMFGL+SCFAI LRS+YT
Sbjct: 393 CLEHHLQKGQGVAGRAFLSQNSCFCPDITQFCKTEYPLVHYARMFGLTSCFAIFLRSSYT 452
Query: 181 GCDDYILEFFLPPGITALSKQLIFLDSVLVTMKQHYRSLKVASGDXXXXXXXXXXXXXXX 360
G DDYILEFFLPP IT +Q FL S+L TMKQ ++SLKVASG
Sbjct: 453 GDDDYILEFFLPPSITDSHEQKTFLGSILATMKQDFQSLKVASG----MDLEEEGFVEMI 508
Query: 361 DKNLTSRFQCIQISPRVTSPPNPNGLLEQGSSLQPSFEKHSMVEAGDPGKENIAVCSSRS 540
+ R +CIQI SPP N L +G Q EK+ ++ D
Sbjct: 509 EATTNGRLECIQIPQPTKSPPGDNMLPNEGHIEQIDSEKNKLMFDLD------------- 555
Query: 541 HTAAISENKDTKKTLDKRKGKTEKFISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHH 720
I TKK ++++GK EK ISLEVLQQYFAGSLKDAAK LGVCPTTMKRICR H
Sbjct: 556 ---VIKNGGRTKKPTERKRGKAEKTISLEVLQQYFAGSLKDAAKRLGVCPTTMKRICRQH 612
Query: 721 GISRWPSRKINKVNRSLSKLNHVIQSVQGAEGAFNXXXXXXXXXXISVGSISWPVCLNGP 900
GISRWPSRKINKVNRSLSKL VI+SVQG EG F+ ++ G+ISWP LNG
Sbjct: 613 GISRWPSRKINKVNRSLSKLKWVIESVQGTEGTFDLTPLTTSPLHVADGTISWPSNLNGS 672
Query: 901 REQHSLGPKLSELHRGKETYGPTLGTPEFNHHDKIGNKIVERGDVFAHQEEQLHRPMGLL 1080
+Q S K E H G PT P G
Sbjct: 673 NQQTSPNSKPPEYH-GNRNGSPTCRKP------------------------------GSD 701
Query: 1081 SEFGNGSSNPKTSGSGGESTETPTSHGSCQDSPTNETTCTDDIFVSSIQAQVEK---SLG 1251
+ G+ S K SGS S TPTSH SCQ SP NE+ D VS + + K S G
Sbjct: 702 GQAGSNRSK-KRSGSRDGSAGTPTSHDSCQGSPENESAPVKDPSVSPVHERCIKAGGSPG 760
Query: 1252 LQSQPNEQLTLCSAYSIPDTPFKTKQHPVLGGMLIEDAGSSKDLRNLSNFVSEGCLEEWD 1431
L Q ++ L SAYSIPD T+ H GGMLIEDAGSSKDLRNL V+E ++E
Sbjct: 761 LALQQTKEQNLSSAYSIPDALVATEAHEPFGGMLIEDAGSSKDLRNLCPAVAEAIVDERV 820
Query: 1432 QESSWKNYSCPDQVPQQEMAPTANTI---TATQDTMTLTVKVNHRDDIIRFRLPITSGLQ 1602
ESSW + C + +P Q A + I T Q+ ++T+K +R+D+IRFR+ ++SG+
Sbjct: 821 PESSWTDPPCFNMLPTQMFAAPLHAIPQATPRQEMKSVTIKATYREDVIRFRISLSSGIV 880
Query: 1603 DLKEEVAKRFKLEVGTFDLKYLDDDHDLVSLACETDLQECLEISKVSGKRVIRLSVHEIM 1782
+LKEEVAKR KLEVGTFD+KYLDDD + V +AC+ DL EC+++S+ S +IRLSVH+
Sbjct: 881 ELKEEVAKRLKLEVGTFDIKYLDDDQEWVLIACDADLLECMDVSRSSSSNIIRLSVHDAN 940
Query: 1783 ANLGSSSASS 1812
ANLGSS S+
Sbjct: 941 ANLGSSCEST 950
>ref|XP_004165968.1| PREDICTED: protein NLP6-like [Cucumis sativus]
Length = 1006
Score = 499 bits (1285), Expect = e-138
Identities = 289/613 (47%), Positives = 378/613 (61%), Gaps = 9/613 (1%)
Frame = +1
Query: 1 CSEHHLQKGQGVGGRAXXXXXXXXXXDITQFSKTQYPLVHYARMFGLSSCFAICLRSAYT 180
C EHHLQKGQGV GRA D+TQF KT+YPLVHYA MFGL SCF+ICLRS +T
Sbjct: 398 CLEHHLQKGQGVSGRAFLSHSSCFCGDVTQFCKTEYPLVHYALMFGLKSCFSICLRSTFT 457
Query: 181 GCDDYILEFFLPPGITALSKQLIFLDSVLVTMKQHYRSLKVASG-DXXXXXXXXXXXXXX 357
G D+YILEFFLPP I +Q L +++ TMK+H+ +LKVASG +
Sbjct: 458 GDDEYILEFFLPPSIVDYQEQKNLLGALMATMKKHFYTLKVASGINLEDKEGLVEIIQAS 517
Query: 358 XDKNLTSRFQCIQISPRVTSPPNPNGLLE--QGSSLQPSFEKHSMVEAGDPGKENIAVCS 531
+ SRF+ IQI V PP + + + + ++L+ + E+ S++ P EN
Sbjct: 518 RNGGFDSRFEYIQIPRPVQLPPASDAMPKAVEVAALE-TLEQQSLMVHDAPKDENNGAWD 576
Query: 532 SRSHTAA-ISENKDTKKTLDKRKGKTEKFISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI 708
SH + +NK+ KKT ++++GK EK ISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI
Sbjct: 577 GESHKSVPCPQNKEVKKTSERKRGKAEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI 636
Query: 709 CRHHGISRWPSRKINKVNRSLSKLNHVIQSVQGAEGAFNXXXXXXXXXXISVGSISWPVC 888
CR HGISRWPSRKINKVNRSLSKL VI+SVQGAEGAF ++V S S P+
Sbjct: 637 CRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGISSLATSPLPVTVSSSSHPLT 696
Query: 889 LNGPREQHSLGPKLSELHRGKETYGPTLGTPEFNHHDKIGNKIVERGDVFAHQEEQLHRP 1068
G +Q+ + + S+ + KET TPE +D EE +H
Sbjct: 697 PEGSNQQNFVASQPSD-SQYKET-----NTPEAQTNDTQARLEDRLHRGVLSPEEPIHEQ 750
Query: 1069 MGLLSEFGNGSSNPKT-SGSGGESTETPTSHGSCQDSPTNETTCTDD--IFVSSIQAQVE 1239
G L +FGNG +N +T SGS ES TPTSHGSCQ SP N++ ++ Q
Sbjct: 751 NGFLPKFGNGLNNFRTGSGSREESAGTPTSHGSCQGSPANDSALANNPISIRQHEQCARR 810
Query: 1240 KSLGLQSQPNEQLTLCS-AYSIPDTPFKTKQHPVLGGMLIEDAGSSKDLRNLSNFVSEGC 1416
+S + P ++L + + SIPDT + GGMLIEDAGSSKDL+NL V++
Sbjct: 811 ESPEVAFHPIDKLNISAPPCSIPDTLVMVEPEEPFGGMLIEDAGSSKDLKNLCASVADAV 870
Query: 1417 LEEWDQESSWKN-YSCPDQVPQQEMAPTANTITATQDTMTLTVKVNHRDDIIRFRLPITS 1593
L+E E W N + + P + T I+ Q+ +T+K +++DIIRFR+P+TS
Sbjct: 871 LDEQVPEFCWSNHHDIALRQPMDSVCHTVPHISLRQEPRRMTIKATYKEDIIRFRIPLTS 930
Query: 1594 GLQDLKEEVAKRFKLEVGTFDLKYLDDDHDLVSLACETDLQECLEISKVSGKRVIRLSVH 1773
G+ +L+EEVAKR KLEVGTFD+KY+DDD + V +AC+ DLQEC++ISK SG +IRLSVH
Sbjct: 931 GIVELREEVAKRLKLEVGTFDIKYMDDDREWVLIACDADLQECVDISKSSGSNIIRLSVH 990
Query: 1774 EIMANLGSSSASS 1812
++ NLGSS S+
Sbjct: 991 DLNVNLGSSCEST 1003
>ref|XP_004149006.1| PREDICTED: protein NLP6-like [Cucumis sativus]
Length = 1006
Score = 499 bits (1285), Expect = e-138
Identities = 289/613 (47%), Positives = 378/613 (61%), Gaps = 9/613 (1%)
Frame = +1
Query: 1 CSEHHLQKGQGVGGRAXXXXXXXXXXDITQFSKTQYPLVHYARMFGLSSCFAICLRSAYT 180
C EHHLQKGQGV GRA D+TQF KT+YPLVHYA MFGL SCF+ICLRS +T
Sbjct: 398 CLEHHLQKGQGVSGRAFLSHSSCFCGDVTQFCKTEYPLVHYALMFGLKSCFSICLRSTFT 457
Query: 181 GCDDYILEFFLPPGITALSKQLIFLDSVLVTMKQHYRSLKVASG-DXXXXXXXXXXXXXX 357
G D+YILEFFLPP I +Q L +++ TMK+H+ +LKVASG +
Sbjct: 458 GDDEYILEFFLPPSIVDYQEQKNLLGALMATMKKHFYTLKVASGINLEDKEGLVEIIQAS 517
Query: 358 XDKNLTSRFQCIQISPRVTSPPNPNGLLE--QGSSLQPSFEKHSMVEAGDPGKENIAVCS 531
+ SRF+ IQI V PP + + + + ++L+ + E+ S++ P EN
Sbjct: 518 RNGGFDSRFEYIQIPRPVQLPPASDAMPKAVEVAALE-TLEQQSLMVHDAPKDENNGAWD 576
Query: 532 SRSHTAA-ISENKDTKKTLDKRKGKTEKFISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI 708
SH + +NK+ KKT ++++GK EK ISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI
Sbjct: 577 GESHKSVPCPQNKEVKKTSERKRGKAEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRI 636
Query: 709 CRHHGISRWPSRKINKVNRSLSKLNHVIQSVQGAEGAFNXXXXXXXXXXISVGSISWPVC 888
CR HGISRWPSRKINKVNRSLSKL VI+SVQGAEGAF ++V S S P+
Sbjct: 637 CRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGISSLATSPLPVTVSSSSHPLT 696
Query: 889 LNGPREQHSLGPKLSELHRGKETYGPTLGTPEFNHHDKIGNKIVERGDVFAHQEEQLHRP 1068
G +Q+ + + S+ + KET TPE +D EE +H
Sbjct: 697 PEGSNQQNFVASQPSD-SQYKET-----NTPEAQTNDTQARLEDRLHRGVLSPEEPIHEQ 750
Query: 1069 MGLLSEFGNGSSNPKT-SGSGGESTETPTSHGSCQDSPTNETTCTDD--IFVSSIQAQVE 1239
G L +FGNG +N +T SGS ES TPTSHGSCQ SP N++ ++ Q
Sbjct: 751 NGFLPKFGNGLNNFRTGSGSREESAGTPTSHGSCQGSPANDSALANNPISIRQHEQCARR 810
Query: 1240 KSLGLQSQPNEQLTLCS-AYSIPDTPFKTKQHPVLGGMLIEDAGSSKDLRNLSNFVSEGC 1416
+S + P ++L + + SIPDT + GGMLIEDAGSSKDL+NL V++
Sbjct: 811 ESPEVAFHPIDKLNISAPPCSIPDTLVMVEPEEPFGGMLIEDAGSSKDLKNLCASVADAV 870
Query: 1417 LEEWDQESSWKN-YSCPDQVPQQEMAPTANTITATQDTMTLTVKVNHRDDIIRFRLPITS 1593
L+E E W N + + P + T I+ Q+ +T+K +++DIIRFR+P+TS
Sbjct: 871 LDEQVPEFCWSNHHDIALRQPMDSVCHTVPHISLRQEPRRMTIKATYKEDIIRFRIPLTS 930
Query: 1594 GLQDLKEEVAKRFKLEVGTFDLKYLDDDHDLVSLACETDLQECLEISKVSGKRVIRLSVH 1773
G+ +L+EEVAKR KLEVGTFD+KY+DDD + V +AC+ DLQEC++ISK SG +IRLSVH
Sbjct: 931 GIVELREEVAKRLKLEVGTFDIKYMDDDREWVLIACDADLQECVDISKSSGSNIIRLSVH 990
Query: 1774 EIMANLGSSSASS 1812
++ NLGSS S+
Sbjct: 991 DLNVNLGSSCEST 1003