BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004644
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-...    88   1e-15
ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-...    88   1e-15
ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [...    86   7e-15
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-...    84   2e-14
emb|CBI25839.3| unnamed protein product [Vitis vinifera]               84   2e-14

>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 735

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 34/150 (22%)
 Frame = -3

Query: 569 TRRLAVVNMGPKPESSSFLYELLGKFVHEEGGQILSISVYP------------------- 447
           T RLAVVN+  +   +  LY +L  F+  +GGQILS++VYP                   
Sbjct: 206 THRLAVVNLDWRHVKAVDLYVVLSSFL-PKGGQILSVAVYPSEFGLQRMKEEELHGPVGL 264

Query: 446 ----------PDVDSDDEEETNNKDGEDYE-----GYYAVVECDSVATARDIYASFDGMD 312
                      D D +D+EE +N+    YE      YYAVVECDS+ATA  +Y + DG++
Sbjct: 265 FDGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVE 324

Query: 311 SGRPSGHCVDLQFIPDDMEFEYPPFDVTTK 222
             R S + +DL+FIPD M+FE+PP D  T+
Sbjct: 325 FER-SSNILDLRFIPDSMKFEHPPRDTATE 353


>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 740

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 34/150 (22%)
 Frame = -3

Query: 569 TRRLAVVNMGPKPESSSFLYELLGKFVHEEGGQILSISVYP------------------- 447
           T RLAVVN+  +   +  LY +L  F+  +GGQILS++VYP                   
Sbjct: 211 THRLAVVNLDWRHVKAVDLYVVLSSFL-PKGGQILSVAVYPSEFGLQRMKEEELHGPVGL 269

Query: 446 ----------PDVDSDDEEETNNKDGEDYE-----GYYAVVECDSVATARDIYASFDGMD 312
                      D D +D+EE +N+    YE      YYAVVECDS+ATA  +Y + DG++
Sbjct: 270 FDGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVE 329

Query: 311 SGRPSGHCVDLQFIPDDMEFEYPPFDVTTK 222
             R S + +DL+FIPD M+FE+PP D  T+
Sbjct: 330 FER-SSNILDLRFIPDSMKFEHPPRDTATE 358


>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
           gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
           ESF1, putative [Ricinus communis]
          Length = 722

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 33/147 (22%)
 Frame = -3

Query: 572 GTRRLAVVNMGPKPESSSFLYELLGKFVHEEGGQILSISVYPPDVDS------------- 432
           GT RLAVVN+  +   +  LY +L  F+  +GG ILS++VYP +                
Sbjct: 187 GTHRLAVVNLDWRHVRAVDLYVVLRSFL-PKGGDILSVAVYPSEFGLQRMEEEELHGPVG 245

Query: 431 --DDEEETNNKDGEDYEG------------------YYAVVECDSVATARDIYASFDGMD 312
             DDE++ N++D ++ E                   YYAVVECDSVATA  +Y + DG++
Sbjct: 246 LFDDEKKKNDEDEDEDEDDEIDEEKLRAYEKSRLRYYYAVVECDSVATAEHLYKACDGVE 305

Query: 311 SGRPSGHCVDLQFIPDDMEFEYPPFDV 231
             R S +  DL+F+PD MEF++PP D+
Sbjct: 306 FER-SSNVFDLRFVPDSMEFKHPPRDI 331


>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
          Length = 726

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 29/147 (19%)
 Frame = -3

Query: 575 QGTRRLAVVNMGPKPESSSFLYELLGKFVHEEGGQILSISVYPPDVDS------------ 432
           Q T RLAVVNM  +   +  L+ +L  F+ ++G  ILS+++YP +               
Sbjct: 184 QETHRLAVVNMEWRQVKAVDLFMVLSSFLPKDG-HILSVAIYPSEFGLKRMEEEAVHGPI 242

Query: 431 ---DDEEETNNKDGED---------YEG-----YYAVVECDSVATARDIYASFDGMDSGR 303
              DDE+E ++ DG++         YE      YYAVV+CDS ATA  +Y + DG++  R
Sbjct: 243 GLFDDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFER 302

Query: 302 PSGHCVDLQFIPDDMEFEYPPFDVTTK 222
            S + +DL+FIPD MEF++PP D+ T+
Sbjct: 303 -SSNVLDLRFIPDSMEFKHPPHDIATE 328


>emb|CBI25839.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 29/147 (19%)
 Frame = -3

Query: 575 QGTRRLAVVNMGPKPESSSFLYELLGKFVHEEGGQILSISVYPPDVDS------------ 432
           Q T RLAVVNM  +   +  L+ +L  F+ ++G  ILS+++YP +               
Sbjct: 184 QETHRLAVVNMEWRQVKAVDLFMVLSSFLPKDG-HILSVAIYPSEFGLKRMEEEAVHGPI 242

Query: 431 ---DDEEETNNKDGED---------YEG-----YYAVVECDSVATARDIYASFDGMDSGR 303
              DDE+E ++ DG++         YE      YYAVV+CDS ATA  +Y + DG++  R
Sbjct: 243 GLFDDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFER 302

Query: 302 PSGHCVDLQFIPDDMEFEYPPFDVTTK 222
            S + +DL+FIPD MEF++PP D+ T+
Sbjct: 303 -SSNVLDLRFIPDSMEFKHPPHDIATE 328