BLASTX nr result

ID: Coptis24_contig00004630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004630
         (2092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative ...   162   3e-37
ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-36
ref|XP_003521890.1| PREDICTED: probable tRNA threonylcarbamoylad...   160   2e-36
ref|XP_004155864.1| PREDICTED: probable tRNA threonylcarbamoylad...   159   2e-36
ref|XP_004133922.1| PREDICTED: LOW QUALITY PROTEIN: probable tRN...   159   2e-36

>ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative [Ricinus communis]
           gi|223548868|gb|EEF50357.1| O-sialoglycoprotein
           endopeptidase, putative [Ricinus communis]
          Length = 455

 Score =  162 bits (411), Expect = 3e-37
 Identities = 76/96 (79%), Positives = 90/96 (93%)
 Frame = +3

Query: 3   GRHSLLVLARDLGNYVQLGTTIDDAIGEAYDKTARWLGLDMRKGGGSALEQLAREGNSQS 182
           G H+LLVLARDLG+Y+QLGTTIDDAIGEAYDKTA+WLGLDMRK GG A+E+LAREG+++S
Sbjct: 199 GGHNLLVLARDLGHYIQLGTTIDDAIGEAYDKTAKWLGLDMRKSGGPAIEELAREGDAES 258

Query: 183 IKFSVPMKQHKDCNFSYAGLKTQVKLAIEAKNM*VE 290
           IKFS PM+QHKDCNFSYAGLKTQV+LAIE++N+  E
Sbjct: 259 IKFSTPMQQHKDCNFSYAGLKTQVRLAIESRNINAE 294


>ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|222860825|gb|EEE98367.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  160 bits (405), Expect = 1e-36
 Identities = 75/96 (78%), Positives = 88/96 (91%)
 Frame = +3

Query: 3   GRHSLLVLARDLGNYVQLGTTIDDAIGEAYDKTARWLGLDMRKGGGSALEQLAREGNSQS 182
           G H+LL+LA DLG+Y+QLGTTIDDAIGEAYDKTA+WLGLDM + GG ALE+LAREG+++S
Sbjct: 208 GGHNLLILAHDLGHYIQLGTTIDDAIGEAYDKTAKWLGLDMSRSGGPALEELAREGDAES 267

Query: 183 IKFSVPMKQHKDCNFSYAGLKTQVKLAIEAKNM*VE 290
           IKFS PMKQHKDCNFSYAGLKTQV+LAIE+KN+  E
Sbjct: 268 IKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNINAE 303


>ref|XP_003521890.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis
           protein osgepl1-like [Glycine max]
          Length = 445

 Score =  160 bits (404), Expect = 2e-36
 Identities = 73/93 (78%), Positives = 87/93 (93%)
 Frame = +3

Query: 3   GRHSLLVLARDLGNYVQLGTTIDDAIGEAYDKTARWLGLDMRKGGGSALEQLAREGNSQS 182
           G H+LLVLARDLG Y+QLGTTIDDAIGEAYDKTA+WLGLD+R+ GG A+E+LA EGN++S
Sbjct: 190 GGHNLLVLARDLGQYIQLGTTIDDAIGEAYDKTAKWLGLDLRRSGGPAIEKLAMEGNAES 249

Query: 183 IKFSVPMKQHKDCNFSYAGLKTQVKLAIEAKNM 281
           +KFS+PMKQHKDCNFSYAGLKTQV+LAIE+K +
Sbjct: 250 VKFSIPMKQHKDCNFSYAGLKTQVRLAIESKKI 282


>ref|XP_004155864.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis
           protein Gcp-like [Cucumis sativus]
          Length = 486

 Score =  159 bits (403), Expect = 2e-36
 Identities = 74/93 (79%), Positives = 87/93 (93%)
 Frame = +3

Query: 3   GRHSLLVLARDLGNYVQLGTTIDDAIGEAYDKTARWLGLDMRKGGGSALEQLAREGNSQS 182
           G H+LLVLA+DLG Y+QLGTTIDDAIGEAYDKTA+WLGLD+RK GG A+E+LAREG+ +S
Sbjct: 229 GGHNLLVLAQDLGQYIQLGTTIDDAIGEAYDKTAKWLGLDLRKSGGPAIEELAREGDPKS 288

Query: 183 IKFSVPMKQHKDCNFSYAGLKTQVKLAIEAKNM 281
           IKFS PMKQHKDCNFSYAGLKTQV+LAIE++N+
Sbjct: 289 IKFSTPMKQHKDCNFSYAGLKTQVRLAIESRNI 321


>ref|XP_004133922.1| PREDICTED: LOW QUALITY PROTEIN: probable tRNA
           threonylcarbamoyladenosine biosynthesis protein Gcp-like
           [Cucumis sativus]
          Length = 469

 Score =  159 bits (403), Expect = 2e-36
 Identities = 74/93 (79%), Positives = 87/93 (93%)
 Frame = +3

Query: 3   GRHSLLVLARDLGNYVQLGTTIDDAIGEAYDKTARWLGLDMRKGGGSALEQLAREGNSQS 182
           G H+LLVLA+DLG Y+QLGTTIDDAIGEAYDKTA+WLGLD+RK GG A+E+LAREG+ +S
Sbjct: 212 GGHNLLVLAQDLGQYIQLGTTIDDAIGEAYDKTAKWLGLDLRKSGGPAIEELAREGDPKS 271

Query: 183 IKFSVPMKQHKDCNFSYAGLKTQVKLAIEAKNM 281
           IKFS PMKQHKDCNFSYAGLKTQV+LAIE++N+
Sbjct: 272 IKFSTPMKQHKDCNFSYAGLKTQVRLAIESRNI 304


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