BLASTX nr result
ID: Coptis24_contig00004610
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004610 (474 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEZ55665.1| 5-phosphomevalonate kinase [Salvia miltiorrhiza] 79 3e-13 emb|CAN70293.1| hypothetical protein VITISV_005973 [Vitis vinifera] 79 5e-13 ref|XP_002326557.1| predicted protein [Populus trichocarpa] gi|2... 78 7e-13 ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis v... 78 9e-13 gb|EEE58712.1| hypothetical protein OsJ_10169 [Oryza sativa Japo... 77 1e-12 >gb|AEZ55665.1| 5-phosphomevalonate kinase [Salvia miltiorrhiza] Length = 509 Score = 79.3 bits (194), Expect = 3e-13 Identities = 45/74 (60%), Positives = 49/74 (66%) Frame = -2 Query: 473 IEPESQTQLLDATMNMEXXXXXXXXXXXGFDAVFAVTLGEXXXXXXXXXXSLGVLAMLVT 294 IEPESQTQLLD TMNME GFDAVFAVTLGE SL VLA+LV Sbjct: 422 IEPESQTQLLDTTMNMEGVLLAGVPGAGGFDAVFAVTLGESSSNVVKVWSSLNVLALLVR 481 Query: 293 EDPRGVSIETDDPR 252 EDPRGV +E++DPR Sbjct: 482 EDPRGVFLESNDPR 495 >emb|CAN70293.1| hypothetical protein VITISV_005973 [Vitis vinifera] Length = 613 Score = 78.6 bits (192), Expect = 5e-13 Identities = 44/75 (58%), Positives = 50/75 (66%) Frame = -2 Query: 473 IEPESQTQLLDATMNMEXXXXXXXXXXXGFDAVFAVTLGEXXXXXXXXXXSLGVLAMLVT 294 IEP+SQT+LLDATM+ME GFDA+FAVTLG+ SL VLAMLV Sbjct: 526 IEPDSQTRLLDATMDMEGVLLAGVPGAGGFDAIFAVTLGDSSSNITKAWTSLNVLAMLVR 585 Query: 293 EDPRGVSIETDDPRA 249 EDP GVS+ET DPRA Sbjct: 586 EDPHGVSLETGDPRA 600 >ref|XP_002326557.1| predicted protein [Populus trichocarpa] gi|222833879|gb|EEE72356.1| predicted protein [Populus trichocarpa] Length = 495 Score = 78.2 bits (191), Expect = 7e-13 Identities = 44/74 (59%), Positives = 48/74 (64%) Frame = -2 Query: 473 IEPESQTQLLDATMNMEXXXXXXXXXXXGFDAVFAVTLGEXXXXXXXXXXSLGVLAMLVT 294 IEPESQTQLLDATM ME GFDAVFA+TLG+ SL VLA+LV Sbjct: 408 IEPESQTQLLDATMGMEGVLLAGVPGAGGFDAVFAITLGDSGSNVTKAWSSLNVLALLVR 467 Query: 293 EDPRGVSIETDDPR 252 EDP GVS+ET DPR Sbjct: 468 EDPHGVSLETGDPR 481 >ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis vinifera] gi|297742018|emb|CBI33805.3| unnamed protein product [Vitis vinifera] Length = 508 Score = 77.8 bits (190), Expect = 9e-13 Identities = 44/75 (58%), Positives = 49/75 (65%) Frame = -2 Query: 473 IEPESQTQLLDATMNMEXXXXXXXXXXXGFDAVFAVTLGEXXXXXXXXXXSLGVLAMLVT 294 IEP SQT+LLDATM+ME GFDA+FAVTLG+ SL VLAMLV Sbjct: 421 IEPNSQTRLLDATMDMEGVLLAGVPGAGGFDAIFAVTLGDSSSNITKAWTSLNVLAMLVR 480 Query: 293 EDPRGVSIETDDPRA 249 EDP GVS+ET DPRA Sbjct: 481 EDPHGVSLETGDPRA 495 >gb|EEE58712.1| hypothetical protein OsJ_10169 [Oryza sativa Japonica Group] Length = 528 Score = 77.0 bits (188), Expect = 1e-12 Identities = 44/74 (59%), Positives = 47/74 (63%) Frame = -2 Query: 473 IEPESQTQLLDATMNMEXXXXXXXXXXXGFDAVFAVTLGEXXXXXXXXXXSLGVLAMLVT 294 IEPESQTQLLDATMNME GFDAVF+V LGE S GVL +LV Sbjct: 441 IEPESQTQLLDATMNMEGVLLAGVPGAGGFDAVFSVILGEASDAVAKAWSSAGVLPLLVR 500 Query: 293 EDPRGVSIETDDPR 252 EDPRGVS+E DPR Sbjct: 501 EDPRGVSLEAGDPR 514