BLASTX nr result

ID: Coptis24_contig00004607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004607
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LW48.1|ERF5_NICSY RecName: Full=Ethylene-responsive transcr...   100   1e-23
sp|Q40478.1|ERF5_TOBAC RecName: Full=Ethylene-responsive transcr...    99   5e-23
gb|AAX20037.1| ethylene responsive element binding protein C4 [C...    99   5e-23
gb|ABA39426.1| putative ethylene responsive element-DREB [Capsic...    99   5e-23
gb|AET99098.2| ethylene response factor ERF6 [Solanum tuberosum]      100   2e-22

>sp|Q9LW48.1|ERF5_NICSY RecName: Full=Ethylene-responsive transcription factor 5; AltName:
           Full=Ethylene-responsive element-binding factor 4;
           Short=EREBP-4; AltName: Full=Ethylene-responsive
           element-binding factor 5 homolog; AltName: Full=NsERF4
           gi|8809575|dbj|BAA97124.1| ethylene-responsive element
           binding factor [Nicotiana sylvestris]
          Length = 282

 Score =  100 bits (248), Expect(2) = 1e-23
 Identities = 50/94 (53%), Positives = 65/94 (69%)
 Frame = +1

Query: 175 FKKRRPSLKKLSVPDVKPIVQQVQVCAASKPVDSGIDKKHYRGVRQRPWGKFAAEIRDPS 354
           FK+R+PSL  +++P  + +VQ+V++           +KKHYRGVRQRPWGKFAAEIRDP+
Sbjct: 107 FKERKPSLN-IAIPVKQEVVQKVELAPT--------EKKHYRGVRQRPWGKFAAEIRDPN 157

Query: 355 RKGARVWLGTFETXXXXXXXXXXXXFKMRGSKAI 456
           RKG RVWLGTF+T            +K+RGSKAI
Sbjct: 158 RKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAI 191



 Score = 35.8 bits (81), Expect(2) = 1e-23
 Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 518 RGSKAILNFPLEIGNNSYEVNTQ--PTTTSSYRKRSR 622
           RGSKAI+NFPLE+ N   E N +  P   SS RKR R
Sbjct: 186 RGSKAIVNFPLEVANFKQEFNNEIRPLVNSS-RKRVR 221


>sp|Q40478.1|ERF5_TOBAC RecName: Full=Ethylene-responsive transcription factor 5; AltName:
           Full=Ethylene-responsive element-binding factor 4;
           Short=EREBP-4; AltName: Full=Ethylene-responsive
           element-binding factor 5 homolog; AltName: Full=NtERF4
           gi|1208497|dbj|BAA07323.1| ethylene-responsive element
           binding protein [Nicotiana tabacum]
          Length = 291

 Score = 98.6 bits (244), Expect(2) = 5e-23
 Identities = 51/94 (54%), Positives = 61/94 (64%)
 Frame = +1

Query: 175 FKKRRPSLKKLSVPDVKPIVQQVQVCAASKPVDSGIDKKHYRGVRQRPWGKFAAEIRDPS 354
           FK+R+PSL        + +VQ+V+V           +KKHYRGVRQRPWGKFAAEIRDP+
Sbjct: 113 FKERKPSLNIAIPMKQQEVVQKVEVVPT--------EKKHYRGVRQRPWGKFAAEIRDPN 164

Query: 355 RKGARVWLGTFETXXXXXXXXXXXXFKMRGSKAI 456
           RKG RVWLGTF+T            FK+RGSKAI
Sbjct: 165 RKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAI 198



 Score = 35.0 bits (79), Expect(2) = 5e-23
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +2

Query: 518 RGSKAILNFPLEIGNNSYEVNTQPTTTSSYRKRSR 622
           RGSKAI+NFPLE+ N   + N      +S RKR R
Sbjct: 193 RGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMR 227


>gb|AAX20037.1| ethylene responsive element binding protein C4 [Capsicum annuum]
          Length = 272

 Score = 99.0 bits (245), Expect(2) = 5e-23
 Identities = 52/94 (55%), Positives = 63/94 (67%)
 Frame = +1

Query: 175 FKKRRPSLKKLSVPDVKPIVQQVQVCAASKPVDSGIDKKHYRGVRQRPWGKFAAEIRDPS 354
           F +R+PSL  ++VP    +VQ+V+V           +KKHYRGVRQRPWGKFAAEIRDP+
Sbjct: 94  FNERKPSLN-IAVPVKPVVVQKVEVVR---------EKKHYRGVRQRPWGKFAAEIRDPN 143

Query: 355 RKGARVWLGTFETXXXXXXXXXXXXFKMRGSKAI 456
           RKG RVWLGTF+T            FK+RGSKAI
Sbjct: 144 RKGTRVWLGTFDTAVDAAKAYDRAAFKLRGSKAI 177



 Score = 34.7 bits (78), Expect(2) = 5e-23
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = +2

Query: 518 RGSKAILNFPLEIG-----NNSYEVNTQPTTTSSYRKRSR 622
           RGSKAILNFPLE+      N++ EV  Q  ++ S R R +
Sbjct: 172 RGSKAILNFPLEVANFKQQNSTVEVPQQVNSSGSKRAREK 211


>gb|ABA39426.1| putative ethylene responsive element-DREB [Capsicum annuum]
          Length = 235

 Score = 99.0 bits (245), Expect(2) = 5e-23
 Identities = 52/94 (55%), Positives = 63/94 (67%)
 Frame = +1

Query: 175 FKKRRPSLKKLSVPDVKPIVQQVQVCAASKPVDSGIDKKHYRGVRQRPWGKFAAEIRDPS 354
           F +R+PSL  ++VP    +VQ+V+V           +KKHYRGVRQRPWGKFAAEIRDP+
Sbjct: 94  FNERKPSLN-IAVPVKPVVVQKVEVVR---------EKKHYRGVRQRPWGKFAAEIRDPN 143

Query: 355 RKGARVWLGTFETXXXXXXXXXXXXFKMRGSKAI 456
           RKG RVWLGTF+T            FK+RGSKAI
Sbjct: 144 RKGTRVWLGTFDTAVDAAKAYDRAAFKLRGSKAI 177



 Score = 34.7 bits (78), Expect(2) = 5e-23
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = +2

Query: 518 RGSKAILNFPLEIG-----NNSYEVNTQPTTTSSYRKRSR 622
           RGSKAILNFPLE+      N++ EV  Q  ++ S R R +
Sbjct: 172 RGSKAILNFPLEVANFKQQNSTVEVPQQVNSSGSKRAREK 211


>gb|AET99098.2| ethylene response factor ERF6 [Solanum tuberosum]
          Length = 212

 Score =  100 bits (248), Expect(2) = 2e-22
 Identities = 52/94 (55%), Positives = 65/94 (69%)
 Frame = +1

Query: 175 FKKRRPSLKKLSVPDVKPIVQQVQVCAASKPVDSGIDKKHYRGVRQRPWGKFAAEIRDPS 354
           FK+R+PSL  +++P    +VQ+V+V +         +KKHYRGVRQRPWGKFAAEIRDP+
Sbjct: 61  FKERKPSLN-VAIPAKPVVVQKVEVES---------EKKHYRGVRQRPWGKFAAEIRDPN 110

Query: 355 RKGARVWLGTFETXXXXXXXXXXXXFKMRGSKAI 456
           RKG RVWLGTF+T            FK+RGSKAI
Sbjct: 111 RKGTRVWLGTFDTAVDAAKAYDRAAFKLRGSKAI 144



 Score = 31.6 bits (70), Expect(2) = 2e-22
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +2

Query: 518 RGSKAILNFPLEIGNNSYEVNTQPTTTSSYRKRSR 622
           RGSKAILNFPLE+ N   + +      ++  KR R
Sbjct: 139 RGSKAILNFPLEVANFKQQNHDDVEIKTAGSKRVR 173


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