BLASTX nr result
ID: Coptis24_contig00004582
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004582 (2429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,... 551 e-154 ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|2... 549 e-153 ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267... 542 e-151 emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera] 542 e-151 ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,... 536 e-149 >ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Length = 478 Score = 551 bits (1420), Expect = e-154 Identities = 281/475 (59%), Positives = 320/475 (67%) Frame = +3 Query: 402 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 581 MESDLGKLFIGGISWDT+E+RLKEYF YG+VVEAVIM+DRTTGRARGFGFVVFADP VA Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60 Query: 582 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 761 ERV+++KH IDGRTVEAKKAVPRDDQHILNRN+SSIHGSPGP RTKKIFVGGLASTVT++ Sbjct: 61 ERVIVDKHMIDGRTVEAKKAVPRDDQHILNRNTSSIHGSPGPGRTKKIFVGGLASTVTDN 120 Query: 762 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 941 DFKKYF+QFG ITDVVVMYDHNTQRPRGFGFITYDSEDAV++VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR 180 Query: 942 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1121 AVPKELSPGPSRSPL GYNYGLSR N+FLN Y QGYN NS+G +G+RMD Sbjct: 181 AVPKELSPGPSRSPLIGYNYGLSRTNNFLNAYAQGYNMNSVGGFGMRMDSRFSPLASGRS 240 Query: 1122 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1301 YGMSMN EPGL+PSYGG +NF S +GR L+PYYSG+ +RY Sbjct: 241 GFPPFGTTGYGMSMNLEPGLTPSYGGGSNFGNSPGYGRMLSPYYSGNSSRYSTPIGYGVG 300 Query: 1302 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1481 VW GLN ++NPAS NWG S +SA Sbjct: 301 NARNDSVLSPTTRNVWGNGGLNSAANPASPGAFLGSGSGSFGVSFGNSGTNWGPS-HVSA 359 Query: 1482 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXPTPSLSASNGGFDGAYGELYG 1661 + P S + SN G++G+YG+LY Sbjct: 360 QGGGSASAYTSGSMGYGSGDSSYGLGGGAYGRNNGSNAAPNSSFAGSNSGYEGSYGDLYR 419 Query: 1662 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSR 1826 GSVYGD TWRS T EL+ A+DVT+K+S GY+G Y VT+RQS+R Sbjct: 420 SGSVYGDSTWRSGTPELEGSGSFGYGLSNIAADVTAKSSEGYIGSYGVTSRQSNR 474 >ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa] Length = 478 Score = 549 bits (1414), Expect = e-153 Identities = 282/475 (59%), Positives = 321/475 (67%) Frame = +3 Query: 402 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 581 MESDLGKLFIGGISWDT+E+RLKEYF YG+VVEAVIM+DR TGRARGFGFVVFADP+VA Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVA 60 Query: 582 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 761 ERV+MEKH +DGRTVEAKKAVPRDDQHIL+RN+SSIHGSPGP RTKKIFVGGLASTVTE+ Sbjct: 61 ERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTVTEN 120 Query: 762 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 941 DFKKYF+QFG ITDVVVMYDHNT RPRGFGFITYDSE+AV++VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180 Query: 942 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1121 AVPKELSPGPSRSPL GYNYGL+R N+FLN Y QGYN NSIG +G+RMD Sbjct: 181 AVPKELSPGPSRSPLMGYNYGLTRANNFLNAYAQGYNMNSIGGFGMRMDSRFNPLATGRS 240 Query: 1122 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1301 YGMSMN EP LSPSYGG +NF+ + A+GR +PYYSG+P+RY Sbjct: 241 GFAPFSTAGYGMSMNLEPALSPSYGGVSNFSNTPAYGRISSPYYSGNPSRYSTPVGYGEG 300 Query: 1302 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1481 VW N ++NPAS NWG SP +SA Sbjct: 301 NARNDSLLSPTTWNVWGNGSHNTATNPASPGPLLGSRTGNFGVSFGNSGSNWGTSP-VSA 359 Query: 1482 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXPTPSLSASNGGFDGAYGELYG 1661 + PT S S S GG++G+YG+LY Sbjct: 360 QGRGSASGYTTGSMGYGSGDNNYGLSGAGYVRNSGTGAPPTSSFSGSAGGYEGSYGDLYR 419 Query: 1662 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSR 1826 GSVYGD TW+SAT ELD ASDVT+K+S GY+G Y VT+RQS+R Sbjct: 420 SGSVYGDSTWQSATPELDGCGSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQSNR 474 >ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera] Length = 478 Score = 542 bits (1396), Expect = e-151 Identities = 281/475 (59%), Positives = 315/475 (66%) Frame = +3 Query: 402 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 581 MESDLGKLFIGGISWDT+EDRLKEYF++YG+VVEAVIM+DRTTGRARGFGFVVFADP VA Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60 Query: 582 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 761 ERVVM+KH IDGRTVEAKKAVPRDDQH+LNRN+ SIHGSPGP RTKKIFVGGLASTVTES Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120 Query: 762 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 941 DFKKYFDQFGTI DVVVMYDHNTQRPRGFGFITYDSE+AVE+VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180 Query: 942 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1121 AVPKE SPGPSRSPL GYNYGL R N+FLN Y QGYN +S+G+YG+RMD Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240 Query: 1122 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1301 YGM MN E GLSPSY GN++F+ + +GR LNPYYSG+ NRY Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300 Query: 1302 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1481 VW LN ++NPAS NWG SP I A Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSP-IPA 359 Query: 1482 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXPTPSLSASNGGFDGAYGELYG 1661 N+ S + S GG++G+Y ELY Sbjct: 360 QGGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNSSTGVAAASSFAPSTGGYEGSYEELYR 419 Query: 1662 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSR 1826 GSVY D TWR+ TSELD ASDVT+ ++ Y+G YSV NRQS+R Sbjct: 420 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNR 474 >emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera] Length = 482 Score = 542 bits (1396), Expect = e-151 Identities = 281/475 (59%), Positives = 315/475 (66%) Frame = +3 Query: 402 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 581 MESDLGKLFIGGISWDT+EDRLKEYF++YG+VVEAVIM+DRTTGRARGFGFVVFADP VA Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60 Query: 582 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 761 ERVVM+KH IDGRTVEAKKAVPRDDQH+LNRN+ SIHGSPGP RTKKIFVGGLASTVTES Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120 Query: 762 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 941 DFKKYFDQFGTI DVVVMYDHNTQRPRGFGFITYDSE+AVE+VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180 Query: 942 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1121 AVPKE SPGPSRSPL GYNYGL R N+FLN Y QGYN +S+G+YG+RMD Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240 Query: 1122 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1301 YGM MN E GLSPSY GN++F+ + +GR LNPYYSG+ NRY Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300 Query: 1302 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1481 VW LN ++NPAS NWG SP I A Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSP-IPA 359 Query: 1482 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXPTPSLSASNGGFDGAYGELYG 1661 N+ S + S GG++G+Y ELY Sbjct: 360 QGGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNSSTGVAAASSFAPSTGGYEGSYEELYR 419 Query: 1662 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSR 1826 GSVY D TWR+ TSELD ASDVT+ ++ Y+G YSV NRQS+R Sbjct: 420 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNR 474 >ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Length = 484 Score = 536 bits (1381), Expect = e-149 Identities = 281/477 (58%), Positives = 324/477 (67%), Gaps = 2/477 (0%) Frame = +3 Query: 402 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 581 M+SD GKLFIGGISWDTNE+RLKEYF S+G+VVEAVIMKDRTTGRARGFGFVVFAD VA Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVA 60 Query: 582 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNS-SSIHGSPGPARTKKIFVGGLASTVTE 758 ERV+MEKH IDGR VEAKKAVPRDDQ+ILNR++ SSIHGSPGP RT+KIFVGGLASTVTE Sbjct: 61 ERVIMEKHNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGLASTVTE 120 Query: 759 SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVK 938 +DF+KYF+Q+GTITDVVVMYDHNTQRPRGFGFITYDSE+AV+KVL KTFHELNGKMVEVK Sbjct: 121 TDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVK 180 Query: 939 RAVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXX 1118 RAVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGY P+++G YG+RMD Sbjct: 181 RAVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYTPSAVGGYGLRMDGRFSPVAGGR 240 Query: 1119 XXXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXX 1298 YGM MNFEP SPSYGGN NF+++L++GRG++PYY G+ NR+ Sbjct: 241 SGFPPFGS-GYGMGMNFEPAFSPSYGGNANFSSNLSYGRGMSPYYIGNTNRFANPTGYDG 299 Query: 1299 XXXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXX-NWGLSPSI 1475 +W GLNY+S+ AS+ NWG S ++ Sbjct: 300 GNGGNSSFFSSVTRNLWGNGGLNYNSSSASSNTYMGSGSGSIGGNNFGNSAVNWG-SSTL 358 Query: 1476 SAXXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXPTPSLSASNGGFDGAYGEL 1655 +A + T S +ASNG FDG +G+L Sbjct: 359 AAHGGGSNASNNNLNFGYGGGENSFSLGTGGYGRNSVNNLATTSSYAASNGSFDGTFGDL 418 Query: 1656 YGVGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSR 1826 YG GS YGDPTWRS+ SE D SD + KNS GYV GYSV RQ++R Sbjct: 419 YGGGSDYGDPTWRSSNSERDGSGSFGYGLGNATSDASVKNSPGYV-GYSVNKRQTNR 474