BLASTX nr result

ID: Coptis24_contig00004581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004581
         (2615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polyme...   431   e-118
emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera]   428   e-117
ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polyme...   419   e-114
emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera]   417   e-114
ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|2...   396   e-107

>ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
            vinifera]
          Length = 599

 Score =  431 bits (1107), Expect = e-118
 Identities = 229/462 (49%), Positives = 303/462 (65%)
 Frame = -1

Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
            ME +  KVLD+  RIVV  KRKRAA+  AH + +                 CK+      
Sbjct: 1    METKLEKVLDSKSRIVVGWKRKRAAQYAAHLSALNSKK----------NRLCKRR----K 46

Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
             DG + ++ P  +KSL+K YSNF KT LP+R++FY NGDW DFP+  I LV++DF+++K 
Sbjct: 47   LDGYRMNYGPNFEKSLLKGYSNFMKTELPQRIMFYVNGDWKDFPQNIITLVRKDFQVRKS 106

Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
              EVE  G   +LDF+HM+ VD+KTG+Q+PIAWIDEAG CF PE  SG +E H C +   
Sbjct: 107  YTEVELNGNCFMLDFMHMVRVDMKTGLQQPIAWIDEAGNCFIPETFSGEDEIHYCCRHEY 166

Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
             ++  L + +P  SH+IKLQLEI++    + K+E+CS  SN + K   + + P    F +
Sbjct: 167  GKDQQLFFGEPYGSHDIKLQLEIDIKGVGHSKLEECSGESNALDKHFLIGKKPASNRFDV 226

Query: 1610 DQEESTDEKSVREIKEVIGENRMLKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSICA 1431
            + E+S     V+ + E +GEN+ ++         G  +  L  D V+ M  +GM S I A
Sbjct: 227  EVEDSNKMSDVK-VDEAVGENQQIE--GNLISRIGSSHGSLDFDTVRDMFTSGMNSLISA 283

Query: 1430 DNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLGFN 1251
            D I  + R +    ++RLELF+KQ+EIT KYR +ANV+YAWL +SKEA+S I+M+GLG  
Sbjct: 284  DIIE-VYRGSSASMEARLELFQKQIEITSKYRADANVKYAWLAASKEALSSIMMYGLGHC 342

Query: 1250 ELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQFCP 1071
               K K  YG GVHLT+ + S+ S +YCDVDENGVQH+VLCRVI+GNMELVHPGS Q  P
Sbjct: 343  RPSKVKPVYGIGVHLTAANFSYPSVNYCDVDENGVQHIVLCRVIMGNMELVHPGSGQCHP 402

Query: 1070 SGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASK 945
            S ENFDSGVDDL NP+HY IWNMNMNTHIYPEYVVSFK +S+
Sbjct: 403  SSENFDSGVDDLQNPKHYIIWNMNMNTHIYPEYVVSFKVSSR 444



 Score = 91.3 bits (225), Expect = 1e-15
 Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
 Frame = -2

Query: 820 TISNTSQEKLQTNMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFA 644
           T    SQ   +  + P     D H TP S+  S GK +++  +  + PKS WMPF  LFA
Sbjct: 465 TCQGQSQGHSKLGLHPVGLGNDSHPTP-SLGRSLGKATTLGSSTLRVPKSPWMPFPMLFA 523

Query: 643 AIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKLPGR-- 470
           AI  KVP   M+LV   Y  FR  KISR + V ++R  +GDTLL++TI  LQ K+P +  
Sbjct: 524 AISKKVPLKDMQLVDTQYELFRRKKISRADFVKKLRLIVGDTLLKSTITHLQCKVPSKTS 583

Query: 469 -DLVVPKQE 446
            DL  PKQE
Sbjct: 584 CDLEAPKQE 592


>emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera]
          Length = 604

 Score =  428 bits (1100), Expect = e-117
 Identities = 228/462 (49%), Positives = 302/462 (65%)
 Frame = -1

Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
            ME +  KVLD+  RIVV  KRKRAA+  AH + +                 CK+      
Sbjct: 1    METKLEKVLDSKSRIVVGWKRKRAAQYAAHLSALNSKK----------NRLCKRR----K 46

Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
             DG + ++ P  +KSL+K YSNF KT LP+ ++FY NGDW DFP+  I LV++DF+++K 
Sbjct: 47   LDGYRMNYGPNFEKSLLKGYSNFMKTELPQXIMFYVNGDWXDFPQNIITLVRKDFQVRKS 106

Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
              EVE  G   +LDF+HM+ VD+KTG+Q+PIAWIDEAG CF PE  SG +E H C +   
Sbjct: 107  YTEVELNGNCFMLDFMHMVRVDMKTGLQQPIAWIDEAGNCFXPETFSGEDEIHYCCRHEY 166

Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
             ++  L + +P  SH+IKLQLEI++    + K+E+CS  SN + K   + + P    F +
Sbjct: 167  GKDQQLFFGEPYGSHDIKLQLEIDIKGVGHSKLEECSGESNALDKHFLIGKKPASNRFDV 226

Query: 1610 DQEESTDEKSVREIKEVIGENRMLKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSICA 1431
            + E+S     V+ + E +GEN+ ++         G  +  L  D V+ M  +GM S I A
Sbjct: 227  EVEDSNKMSDVK-VDEAVGENQQIE--GNLISRIGSSHGSLDFDTVRDMFTSGMNSLISA 283

Query: 1430 DNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLGFN 1251
            D I  + R +    ++RLELF+KQ+EIT KYR +ANV+YAWL +SKEA+S I+M+GLG  
Sbjct: 284  DIIE-VYRGSSASMEARLELFQKQIEITSKYRADANVKYAWLAASKEALSSIMMYGLGHC 342

Query: 1250 ELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQFCP 1071
               K K  YG GVHLT+ + S+ S +YCDVDENGVQH+VLCRVI+GNMELVHPGS Q  P
Sbjct: 343  RPSKVKPVYGIGVHLTAANFSYPSVNYCDVDENGVQHIVLCRVIMGNMELVHPGSGQCHP 402

Query: 1070 SGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASK 945
            S ENFDSGVDDL NP+HY IWNMNMNTHIYPEYVVSFK +S+
Sbjct: 403  SSENFDSGVDDLQNPKHYIIWNMNMNTHIYPEYVVSFKVSSR 444



 Score = 82.4 bits (202), Expect = 6e-13
 Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
 Frame = -2

Query: 820 TISNTSQEKLQTNMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFA 644
           T    SQ   +  + P     D H TP S+  S GK +++  +  + PKS WMPF  LFA
Sbjct: 465 TCQGQSQGHSKLGLHPVGLXNDSHPTP-SLGRSLGKATTLGSSTLRVPKSPWMPFPMLFA 523

Query: 643 AIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKL 479
           AI  KVP   M+LV   Y  FR  KISR + V ++R  +GDTLL++TI  LQ K+
Sbjct: 524 AISKKVPLKDMQLVDTQYELFRRKKISRADFVKKLRLIVGDTLLKSTITHLQCKV 578


>ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
            vinifera]
          Length = 598

 Score =  419 bits (1077), Expect = e-114
 Identities = 228/463 (49%), Positives = 306/463 (66%), Gaps = 2/463 (0%)
 Frame = -1

Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
            ME +  KVLD  RR+VV LKRKR A+  A ++                 M   ++     
Sbjct: 1    MEAKFEKVLDTNRRLVVGLKRKRVAQYAASWS----------------PMHKNKLRKQRK 44

Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
             DGC+ +      K+L+K YSNF KT LP+R++FY NG+WTDFPE  + LVK+DF+++K 
Sbjct: 45   SDGCRMNSGSNFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDLVGLVKKDFQVKKS 104

Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
             +EVE      ++DFLHM  VDLKTG++KPIAWIDEAG CFFPEI SG+ E H+C   G 
Sbjct: 105  YIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC--CGH 162

Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
            +    LL+ +P  SH+IKLQLEI+V    +  +++CS  SN ++K + +++ P      +
Sbjct: 163  ECGQQLLFREPYGSHDIKLQLEIDVNDAGHTNLKECSGESNPVIKHVLIDKNPASDQNDV 222

Query: 1610 DQEESTDEKSVREIKEVIGENRML--KYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSI 1437
            + E+S ++ S  ++ + +GEN+ +  K + R +   G L      D V+ M I+ M   I
Sbjct: 223  EVEDSCNKTSDAKMDKAVGENQQMEGKLVTRIESVHGTLK----FDTVRDMFISSMSPFI 278

Query: 1436 CADNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLG 1257
             A  +   Q S+    Q+RLELF+KQVEIT KYR  ANV+YAWL SSKEA+S I+M+GLG
Sbjct: 279  SASILEVYQGSSSSM-QARLELFQKQVEITSKYRTEANVRYAWLASSKEALSSIMMYGLG 337

Query: 1256 FNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQF 1077
                 + K +YG GVHLT+V+  ++SA+YCDVDENGVQH+VLCRVILGNMELVH GS+Q 
Sbjct: 338  HYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQHVVLCRVILGNMELVHLGSKQC 397

Query: 1076 CPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRAS 948
             PS E+FDSGVDDL NP HY +WNMNMNTHIYPE+VVSFK +S
Sbjct: 398  YPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSFKVSS 440



 Score = 92.0 bits (227), Expect = 7e-16
 Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
 Frame = -2

Query: 754 CHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFAAIEDKVPYSSMKLVYQFYGQFR 578
           C QTP  ++ S GK ++   +  K PKS WMPF  LFAAI  KVP   M+LV   Y QFR
Sbjct: 485 CPQTP-GLEGSLGKAATFGSSTVKVPKSPWMPFPMLFAAISKKVPLKDMQLVNAQYEQFR 543

Query: 577 SNKISRDELVHRMRWAIGDTLLRATIISLQAKLPGR---DLVVPKQEQGT 437
           + KI+R + V ++R  +GDTLLR+TI  LQ K+P +   D  VPKQE  T
Sbjct: 544 TKKINRADFVKKLRMIVGDTLLRSTITHLQCKVPSKSQGDAKVPKQEPET 593


>emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera]
          Length = 857

 Score =  417 bits (1073), Expect = e-114
 Identities = 228/463 (49%), Positives = 305/463 (65%), Gaps = 2/463 (0%)
 Frame = -1

Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
            ME +  KVLD  RR+VV LKRKR A+  A ++                 M   ++     
Sbjct: 1    MEAKFEKVLDTNRRLVVGLKRKRVAQYAASWS----------------PMHKNKLRKQRK 44

Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
             DGC+ +      K+L+K YSNF KT LP+R++FY NG+WTDFPE  + LVK+DF+++K 
Sbjct: 45   SDGCRMNSGSNFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDLVGLVKKDFQVKKS 104

Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
             +EVE      ++DFLHM  VDLKTG++KPIAWIDEAG CFFPEI SG+ E H+C   G 
Sbjct: 105  YIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC--CGH 162

Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
            +    LL+ +P  SH+IKLQLEI+V    +  +++CS  SN ++K + +++ P      +
Sbjct: 163  ECGQQLLFREPYXSHDIKLQLEIDVNDXGHTNLKECSGESNPVIKHVLIDKNPASDQNDV 222

Query: 1610 DQEESTDEKSVREIKEVIGENRML--KYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSI 1437
            + E+S ++ S  ++ +  GEN+ +  K + R +   G L      D V+ M I+ M   I
Sbjct: 223  EVEDSCNKTSDAKMDKAXGENQQMEGKLVTRIESVHGTLK----FDTVRDMFISSMSPFI 278

Query: 1436 CADNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLG 1257
             A  +   Q S+    Q+RLELF+KQVEIT KYR  ANV+YAWL SSKEA+S I+M+GLG
Sbjct: 279  SASILEVYQGSSSSM-QARLELFQKQVEITSKYRTEANVRYAWLASSKEALSSIMMYGLG 337

Query: 1256 FNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQF 1077
                 + K +YG GVHLT+V+  ++SA+YCDVDENGVQH+VLCRVILGNMELVH GS+Q 
Sbjct: 338  HYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQHVVLCRVILGNMELVHLGSKQC 397

Query: 1076 CPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRAS 948
             PS E+FDSGVDDL NP HY +WNMNMNTHIYPE+VVSFK +S
Sbjct: 398  YPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSFKVSS 440



 Score = 78.6 bits (192), Expect = 8e-12
 Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = -2

Query: 742 PLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFAAIEDKVPYSSMKLVYQFYGQFRSNKI 566
           P  ++ S GK ++   +  K PKS WMPF  LFAAI  KVP   M+LV   Y QFR+ KI
Sbjct: 531 PEGLEGSLGKAATFGSSTVKVPKSPWMPFPMLFAAISKKVPLKDMQLVNAQYEQFRTKKI 590

Query: 565 SRDELVHRMRWAIGDTLLRATIISLQAK 482
           +R + V ++R  +GDTLLR+TI  LQ K
Sbjct: 591 NRADFVKKLRMIVGDTLLRSTITHLQCK 618


>ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|222833869|gb|EEE72346.1|
            predicted protein [Populus trichocarpa]
          Length = 623

 Score =  396 bits (1018), Expect = e-107
 Identities = 211/461 (45%), Positives = 300/461 (65%), Gaps = 3/461 (0%)
 Frame = -1

Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
            ME   AKVLD+ RR+++ +KRKRA+R+ A+F+G             L      + G    
Sbjct: 1    MEARIAKVLDSSRRVMLGVKRKRASRNAAYFSGASHTVLPEW----LTLNSIHKPGKRKK 56

Query: 2150 FDGCKNSFLPC---VKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKM 1980
             DG ++    C    ++SL++ YSNF +TG+P+R++ Y+N +WTDFP+  + LV++D + 
Sbjct: 57   LDGSQSKPWSCGHPSRRSLLRCYSNFTRTGVPQRLMCYQNEEWTDFPKDLVTLVRKDLQG 116

Query: 1979 QKVAMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQ 1800
            +K  +EVE  G   ++DFLHM+ +D+KTG+Q+PIAWIDEAG CFFPEI++  +E H C Q
Sbjct: 117  KKAVVEVELEGRRYVIDFLHMLRMDMKTGIQQPIAWIDEAGGCFFPEIYADEDEPHLCCQ 176

Query: 1799 SGGKENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVC 1620
                ++   ++ +P  SHEIKLQLEI++  GD  K+E CS  SN +VK +++ + P    
Sbjct: 177  HDCAKDQGSIFREPPGSHEIKLQLEIDINGGDQSKLE-CSGESNGLVKHIQIAQKPTSDH 235

Query: 1619 FGLDQEESTDEKSVREIKEVIGENRMLKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSS 1440
              ++  +S + K+  +I E   EN+ +K        S    + L +D V+ + +T M   
Sbjct: 236  HLVEVGDSYNRKTGEKIVESNEENQQIKANLVTGTES--FTQMLDSDTVKKIFVTSMNPF 293

Query: 1439 ICADNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGL 1260
              AD I  I R +      R ELF+KQ+E+TEKYRG+ANV+YAWL SSK A+S I+++GL
Sbjct: 294  GGAD-IVDISRCSSTLMPVRFELFQKQIELTEKYRGDANVRYAWLASSKGALSTIMLYGL 352

Query: 1259 GFNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQ 1080
            G      TK+ +G GVHL++ +  H SA+YCDVDENGV+H+V CRVI+GNMEL+  GS Q
Sbjct: 353  GHCVPCTTKSEHGIGVHLSAANFCHTSANYCDVDENGVRHLVFCRVIMGNMELLQHGSRQ 412

Query: 1079 FCPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFK 957
            F PS E+FDSGVDDL NP  Y +WNMNMNTHIYPE+VVSFK
Sbjct: 413  FHPSSEDFDSGVDDLENPREYIVWNMNMNTHIYPEFVVSFK 453



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = -2

Query: 784 NMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFAAIEDKVPYSSMK 608
           N SP   +G   Q       S GK+ S+  +  + PKS WMPF  LFA I +KVP   M+
Sbjct: 506 NKSPAADMGSEIQPVSGSGRSLGKSPSLSSSNTRTPKSPWMPFPMLFAVISNKVPSKDME 565

Query: 607 LVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKLP 476
           L+   Y  FR  KISR+  V ++R  +GD LL++TI SLQ KLP
Sbjct: 566 LITNHYELFREKKISRENFVKKLRLIVGDALLKSTITSLQGKLP 609


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