BLASTX nr result
ID: Coptis24_contig00004581
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004581
(2615 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polyme... 431 e-118
emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera] 428 e-117
ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polyme... 419 e-114
emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera] 417 e-114
ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|2... 396 e-107
>ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
vinifera]
Length = 599
Score = 431 bits (1107), Expect = e-118
Identities = 229/462 (49%), Positives = 303/462 (65%)
Frame = -1
Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
ME + KVLD+ RIVV KRKRAA+ AH + + CK+
Sbjct: 1 METKLEKVLDSKSRIVVGWKRKRAAQYAAHLSALNSKK----------NRLCKRR----K 46
Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
DG + ++ P +KSL+K YSNF KT LP+R++FY NGDW DFP+ I LV++DF+++K
Sbjct: 47 LDGYRMNYGPNFEKSLLKGYSNFMKTELPQRIMFYVNGDWKDFPQNIITLVRKDFQVRKS 106
Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
EVE G +LDF+HM+ VD+KTG+Q+PIAWIDEAG CF PE SG +E H C +
Sbjct: 107 YTEVELNGNCFMLDFMHMVRVDMKTGLQQPIAWIDEAGNCFIPETFSGEDEIHYCCRHEY 166
Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
++ L + +P SH+IKLQLEI++ + K+E+CS SN + K + + P F +
Sbjct: 167 GKDQQLFFGEPYGSHDIKLQLEIDIKGVGHSKLEECSGESNALDKHFLIGKKPASNRFDV 226
Query: 1610 DQEESTDEKSVREIKEVIGENRMLKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSICA 1431
+ E+S V+ + E +GEN+ ++ G + L D V+ M +GM S I A
Sbjct: 227 EVEDSNKMSDVK-VDEAVGENQQIE--GNLISRIGSSHGSLDFDTVRDMFTSGMNSLISA 283
Query: 1430 DNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLGFN 1251
D I + R + ++RLELF+KQ+EIT KYR +ANV+YAWL +SKEA+S I+M+GLG
Sbjct: 284 DIIE-VYRGSSASMEARLELFQKQIEITSKYRADANVKYAWLAASKEALSSIMMYGLGHC 342
Query: 1250 ELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQFCP 1071
K K YG GVHLT+ + S+ S +YCDVDENGVQH+VLCRVI+GNMELVHPGS Q P
Sbjct: 343 RPSKVKPVYGIGVHLTAANFSYPSVNYCDVDENGVQHIVLCRVIMGNMELVHPGSGQCHP 402
Query: 1070 SGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASK 945
S ENFDSGVDDL NP+HY IWNMNMNTHIYPEYVVSFK +S+
Sbjct: 403 SSENFDSGVDDLQNPKHYIIWNMNMNTHIYPEYVVSFKVSSR 444
Score = 91.3 bits (225), Expect = 1e-15
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Frame = -2
Query: 820 TISNTSQEKLQTNMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFA 644
T SQ + + P D H TP S+ S GK +++ + + PKS WMPF LFA
Sbjct: 465 TCQGQSQGHSKLGLHPVGLGNDSHPTP-SLGRSLGKATTLGSSTLRVPKSPWMPFPMLFA 523
Query: 643 AIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKLPGR-- 470
AI KVP M+LV Y FR KISR + V ++R +GDTLL++TI LQ K+P +
Sbjct: 524 AISKKVPLKDMQLVDTQYELFRRKKISRADFVKKLRLIVGDTLLKSTITHLQCKVPSKTS 583
Query: 469 -DLVVPKQE 446
DL PKQE
Sbjct: 584 CDLEAPKQE 592
>emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera]
Length = 604
Score = 428 bits (1100), Expect = e-117
Identities = 228/462 (49%), Positives = 302/462 (65%)
Frame = -1
Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
ME + KVLD+ RIVV KRKRAA+ AH + + CK+
Sbjct: 1 METKLEKVLDSKSRIVVGWKRKRAAQYAAHLSALNSKK----------NRLCKRR----K 46
Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
DG + ++ P +KSL+K YSNF KT LP+ ++FY NGDW DFP+ I LV++DF+++K
Sbjct: 47 LDGYRMNYGPNFEKSLLKGYSNFMKTELPQXIMFYVNGDWXDFPQNIITLVRKDFQVRKS 106
Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
EVE G +LDF+HM+ VD+KTG+Q+PIAWIDEAG CF PE SG +E H C +
Sbjct: 107 YTEVELNGNCFMLDFMHMVRVDMKTGLQQPIAWIDEAGNCFXPETFSGEDEIHYCCRHEY 166
Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
++ L + +P SH+IKLQLEI++ + K+E+CS SN + K + + P F +
Sbjct: 167 GKDQQLFFGEPYGSHDIKLQLEIDIKGVGHSKLEECSGESNALDKHFLIGKKPASNRFDV 226
Query: 1610 DQEESTDEKSVREIKEVIGENRMLKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSICA 1431
+ E+S V+ + E +GEN+ ++ G + L D V+ M +GM S I A
Sbjct: 227 EVEDSNKMSDVK-VDEAVGENQQIE--GNLISRIGSSHGSLDFDTVRDMFTSGMNSLISA 283
Query: 1430 DNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLGFN 1251
D I + R + ++RLELF+KQ+EIT KYR +ANV+YAWL +SKEA+S I+M+GLG
Sbjct: 284 DIIE-VYRGSSASMEARLELFQKQIEITSKYRADANVKYAWLAASKEALSSIMMYGLGHC 342
Query: 1250 ELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQFCP 1071
K K YG GVHLT+ + S+ S +YCDVDENGVQH+VLCRVI+GNMELVHPGS Q P
Sbjct: 343 RPSKVKPVYGIGVHLTAANFSYPSVNYCDVDENGVQHIVLCRVIMGNMELVHPGSGQCHP 402
Query: 1070 SGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASK 945
S ENFDSGVDDL NP+HY IWNMNMNTHIYPEYVVSFK +S+
Sbjct: 403 SSENFDSGVDDLQNPKHYIIWNMNMNTHIYPEYVVSFKVSSR 444
Score = 82.4 bits (202), Expect = 6e-13
Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = -2
Query: 820 TISNTSQEKLQTNMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFA 644
T SQ + + P D H TP S+ S GK +++ + + PKS WMPF LFA
Sbjct: 465 TCQGQSQGHSKLGLHPVGLXNDSHPTP-SLGRSLGKATTLGSSTLRVPKSPWMPFPMLFA 523
Query: 643 AIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKL 479
AI KVP M+LV Y FR KISR + V ++R +GDTLL++TI LQ K+
Sbjct: 524 AISKKVPLKDMQLVDTQYELFRRKKISRADFVKKLRLIVGDTLLKSTITHLQCKV 578
>ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
vinifera]
Length = 598
Score = 419 bits (1077), Expect = e-114
Identities = 228/463 (49%), Positives = 306/463 (66%), Gaps = 2/463 (0%)
Frame = -1
Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
ME + KVLD RR+VV LKRKR A+ A ++ M ++
Sbjct: 1 MEAKFEKVLDTNRRLVVGLKRKRVAQYAASWS----------------PMHKNKLRKQRK 44
Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
DGC+ + K+L+K YSNF KT LP+R++FY NG+WTDFPE + LVK+DF+++K
Sbjct: 45 SDGCRMNSGSNFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDLVGLVKKDFQVKKS 104
Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
+EVE ++DFLHM VDLKTG++KPIAWIDEAG CFFPEI SG+ E H+C G
Sbjct: 105 YIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC--CGH 162
Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
+ LL+ +P SH+IKLQLEI+V + +++CS SN ++K + +++ P +
Sbjct: 163 ECGQQLLFREPYGSHDIKLQLEIDVNDAGHTNLKECSGESNPVIKHVLIDKNPASDQNDV 222
Query: 1610 DQEESTDEKSVREIKEVIGENRML--KYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSI 1437
+ E+S ++ S ++ + +GEN+ + K + R + G L D V+ M I+ M I
Sbjct: 223 EVEDSCNKTSDAKMDKAVGENQQMEGKLVTRIESVHGTLK----FDTVRDMFISSMSPFI 278
Query: 1436 CADNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLG 1257
A + Q S+ Q+RLELF+KQVEIT KYR ANV+YAWL SSKEA+S I+M+GLG
Sbjct: 279 SASILEVYQGSSSSM-QARLELFQKQVEITSKYRTEANVRYAWLASSKEALSSIMMYGLG 337
Query: 1256 FNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQF 1077
+ K +YG GVHLT+V+ ++SA+YCDVDENGVQH+VLCRVILGNMELVH GS+Q
Sbjct: 338 HYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQHVVLCRVILGNMELVHLGSKQC 397
Query: 1076 CPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRAS 948
PS E+FDSGVDDL NP HY +WNMNMNTHIYPE+VVSFK +S
Sbjct: 398 YPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSFKVSS 440
Score = 92.0 bits (227), Expect = 7e-16
Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = -2
Query: 754 CHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFAAIEDKVPYSSMKLVYQFYGQFR 578
C QTP ++ S GK ++ + K PKS WMPF LFAAI KVP M+LV Y QFR
Sbjct: 485 CPQTP-GLEGSLGKAATFGSSTVKVPKSPWMPFPMLFAAISKKVPLKDMQLVNAQYEQFR 543
Query: 577 SNKISRDELVHRMRWAIGDTLLRATIISLQAKLPGR---DLVVPKQEQGT 437
+ KI+R + V ++R +GDTLLR+TI LQ K+P + D VPKQE T
Sbjct: 544 TKKINRADFVKKLRMIVGDTLLRSTITHLQCKVPSKSQGDAKVPKQEPET 593
>emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera]
Length = 857
Score = 417 bits (1073), Expect = e-114
Identities = 228/463 (49%), Positives = 305/463 (65%), Gaps = 2/463 (0%)
Frame = -1
Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
ME + KVLD RR+VV LKRKR A+ A ++ M ++
Sbjct: 1 MEAKFEKVLDTNRRLVVGLKRKRVAQYAASWS----------------PMHKNKLRKQRK 44
Query: 2150 FDGCKNSFLPCVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMQKV 1971
DGC+ + K+L+K YSNF KT LP+R++FY NG+WTDFPE + LVK+DF+++K
Sbjct: 45 SDGCRMNSGSNFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDLVGLVKKDFQVKKS 104
Query: 1970 AMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1791
+EVE ++DFLHM VDLKTG++KPIAWIDEAG CFFPEI SG+ E H+C G
Sbjct: 105 YIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC--CGH 162
Query: 1790 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVCFGL 1611
+ LL+ +P SH+IKLQLEI+V + +++CS SN ++K + +++ P +
Sbjct: 163 ECGQQLLFREPYXSHDIKLQLEIDVNDXGHTNLKECSGESNPVIKHVLIDKNPASDQNDV 222
Query: 1610 DQEESTDEKSVREIKEVIGENRML--KYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSI 1437
+ E+S ++ S ++ + GEN+ + K + R + G L D V+ M I+ M I
Sbjct: 223 EVEDSCNKTSDAKMDKAXGENQQMEGKLVTRIESVHGTLK----FDTVRDMFISSMSPFI 278
Query: 1436 CADNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLG 1257
A + Q S+ Q+RLELF+KQVEIT KYR ANV+YAWL SSKEA+S I+M+GLG
Sbjct: 279 SASILEVYQGSSSSM-QARLELFQKQVEITSKYRTEANVRYAWLASSKEALSSIMMYGLG 337
Query: 1256 FNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQF 1077
+ K +YG GVHLT+V+ ++SA+YCDVDENGVQH+VLCRVILGNMELVH GS+Q
Sbjct: 338 HYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQHVVLCRVILGNMELVHLGSKQC 397
Query: 1076 CPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRAS 948
PS E+FDSGVDDL NP HY +WNMNMNTHIYPE+VVSFK +S
Sbjct: 398 YPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSFKVSS 440
Score = 78.6 bits (192), Expect = 8e-12
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = -2
Query: 742 PLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFAAIEDKVPYSSMKLVYQFYGQFRSNKI 566
P ++ S GK ++ + K PKS WMPF LFAAI KVP M+LV Y QFR+ KI
Sbjct: 531 PEGLEGSLGKAATFGSSTVKVPKSPWMPFPMLFAAISKKVPLKDMQLVNAQYEQFRTKKI 590
Query: 565 SRDELVHRMRWAIGDTLLRATIISLQAK 482
+R + V ++R +GDTLLR+TI LQ K
Sbjct: 591 NRADFVKKLRMIVGDTLLRSTITHLQCK 618
>ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|222833869|gb|EEE72346.1|
predicted protein [Populus trichocarpa]
Length = 623
Score = 396 bits (1018), Expect = e-107
Identities = 211/461 (45%), Positives = 300/461 (65%), Gaps = 3/461 (0%)
Frame = -1
Query: 2330 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGVXXXXXXXXXXXALPQMFCKQMGPLMD 2151
ME AKVLD+ RR+++ +KRKRA+R+ A+F+G L + G
Sbjct: 1 MEARIAKVLDSSRRVMLGVKRKRASRNAAYFSGASHTVLPEW----LTLNSIHKPGKRKK 56
Query: 2150 FDGCKNSFLPC---VKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKM 1980
DG ++ C ++SL++ YSNF +TG+P+R++ Y+N +WTDFP+ + LV++D +
Sbjct: 57 LDGSQSKPWSCGHPSRRSLLRCYSNFTRTGVPQRLMCYQNEEWTDFPKDLVTLVRKDLQG 116
Query: 1979 QKVAMEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQ 1800
+K +EVE G ++DFLHM+ +D+KTG+Q+PIAWIDEAG CFFPEI++ +E H C Q
Sbjct: 117 KKAVVEVELEGRRYVIDFLHMLRMDMKTGIQQPIAWIDEAGGCFFPEIYADEDEPHLCCQ 176
Query: 1799 SGGKENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEEAPGKVC 1620
++ ++ +P SHEIKLQLEI++ GD K+E CS SN +VK +++ + P
Sbjct: 177 HDCAKDQGSIFREPPGSHEIKLQLEIDINGGDQSKLE-CSGESNGLVKHIQIAQKPTSDH 235
Query: 1619 FGLDQEESTDEKSVREIKEVIGENRMLKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSS 1440
++ +S + K+ +I E EN+ +K S + L +D V+ + +T M
Sbjct: 236 HLVEVGDSYNRKTGEKIVESNEENQQIKANLVTGTES--FTQMLDSDTVKKIFVTSMNPF 293
Query: 1439 ICADNIHGIQRSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGL 1260
AD I I R + R ELF+KQ+E+TEKYRG+ANV+YAWL SSK A+S I+++GL
Sbjct: 294 GGAD-IVDISRCSSTLMPVRFELFQKQIELTEKYRGDANVRYAWLASSKGALSTIMLYGL 352
Query: 1259 GFNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHMVLCRVILGNMELVHPGSEQ 1080
G TK+ +G GVHL++ + H SA+YCDVDENGV+H+V CRVI+GNMEL+ GS Q
Sbjct: 353 GHCVPCTTKSEHGIGVHLSAANFCHTSANYCDVDENGVRHLVFCRVIMGNMELLQHGSRQ 412
Query: 1079 FCPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFK 957
F PS E+FDSGVDDL NP Y +WNMNMNTHIYPE+VVSFK
Sbjct: 413 FHPSSEDFDSGVDDLENPREYIVWNMNMNTHIYPEFVVSFK 453
Score = 84.7 bits (208), Expect = 1e-13
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -2
Query: 784 NMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKLFAAIEDKVPYSSMK 608
N SP +G Q S GK+ S+ + + PKS WMPF LFA I +KVP M+
Sbjct: 506 NKSPAADMGSEIQPVSGSGRSLGKSPSLSSSNTRTPKSPWMPFPMLFAVISNKVPSKDME 565
Query: 607 LVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKLP 476
L+ Y FR KISR+ V ++R +GD LL++TI SLQ KLP
Sbjct: 566 LITNHYELFREKKISRENFVKKLRLIVGDALLKSTITSLQGKLP 609