BLASTX nr result
ID: Coptis24_contig00004580
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004580
(2590 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276278.2| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 817 0.0
ref|XP_004160505.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 791 0.0
ref|XP_004141957.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 791 0.0
ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 790 0.0
emb|CBI21499.3| unnamed protein product [Vitis vinifera] 788 0.0
>ref|XP_002276278.2| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Vitis vinifera]
Length = 1276
Score = 817 bits (2110), Expect = 0.0
Identities = 400/580 (68%), Positives = 472/580 (81%), Gaps = 1/580 (0%)
Frame = +2
Query: 851 MAEEGQRIGGFSPRIGGMSSGLAVILAGEDRRAKTQKAHLVSNCDEIGQQPVERTLEHIF 1030
MAE+G R GG +SSGLAVIL G D+R + K+HLVS CDE G Q VERTLEHIF
Sbjct: 1 MAEDGLRTGG-------LSSGLAVILNGGDKRESSSKSHLVSYCDEFGHQSVERTLEHIF 53
Query: 1031 DLPYKTIDPSTCRIDDDFARSIVKNEVLKFQ-DLNCVYSNRDGICILNNGFGPHTVAIDE 1207
DLPYK+I P +D + R+I+KN+ L+F + + + SNRDG+ I + G +TVAI+E
Sbjct: 54 DLPYKSISPLNGPVDTNLIRAIIKNDFLRFYINPDDLGSNRDGVYI-DKSSGSNTVAIEE 112
Query: 1208 ASICGDIRILKQPLLVESLAMFSSARANSCVWKGKWMYEVILETSGVQQLGWATFSCPFT 1387
+SICGDIRI+K PLL+ESL MFSSARAN CVWKGKWMYEVILETSG+QQLGWAT SCPFT
Sbjct: 113 SSICGDIRIIKPPLLLESLGMFSSARANVCVWKGKWMYEVILETSGIQQLGWATLSCPFT 172
Query: 1388 NHKGVGDAEDSYAFDGRRVTKWNKDAETYGQSWVIGDVIGCCIDLDHDEISFYRNGVSLG 1567
+HKGVGDA+DSYAFDG+RV+KWNK+AETYGQSWV+GDVIGCCIDLD+DEISFYRNG+SLG
Sbjct: 173 DHKGVGDADDSYAFDGKRVSKWNKEAETYGQSWVVGDVIGCCIDLDNDEISFYRNGMSLG 232
Query: 1568 VAFDTVRKMEPGLGYYPAVSLSQGERCDLNFGSRPFKYPIGGFLPLQAPPASNSLATYXX 1747
VAF +RKM G+GYYPA+SLSQGERC+LNFG RPFKYPI GFL LQAPP++NSLAT
Sbjct: 233 VAFHGIRKMGAGVGYYPAISLSQGERCELNFGGRPFKYPIEGFLSLQAPPSANSLATCLL 292
Query: 1748 XXXXXXXXXQFVEKAASTSVEKLRRLKRFSPLEDLFHPISHVICEELFSAIDMEAGHSEY 1927
Q +E+A SVEKLRRLKRF PLE+LF+P+S I +E F+ +D E G EY
Sbjct: 293 RCLSRLVEMQCMERAEFNSVEKLRRLKRFVPLEELFNPVSRGIYKEFFALLDAERGSMEY 352
Query: 1928 IGWGPFVSFLMEIFGKRAPHDYERLDRVLSLFLEYRGSHGVFQHAINALSCSCKTSSLVL 2107
+GWG +SF+ME+FG +APHDY LD+VL L LE++GS+ + + INALSCSCKT+SLVL
Sbjct: 353 VGWGSLLSFMMEVFGMQAPHDYTSLDKVLDLLLEFQGSNLILEQVINALSCSCKTASLVL 412
Query: 2108 MDCPFSGSYSYLALTCHILRQEELMVLCWNSSDFEFLLEGFLSRKGPNKQDLQYLMPSVW 2287
+CP++G YSYLAL CH+LR+EELM+L W SSDFE EGFLS K PNKQDLQ +MPSVW
Sbjct: 413 TECPYTGPYSYLALACHMLRREELMLLWWKSSDFELSFEGFLSCKSPNKQDLQCMMPSVW 472
Query: 2288 WPGSCEDVSHEGSMMMTTTALSEAVTKIEEMHRELCRLVIQFIPPIAPPQLPGSVFRTFL 2467
WPGSCEDVS+E +MM+TTTALS AV+KIEE HR+LCRLV+QFIPP P QLPGSVFRTFL
Sbjct: 473 WPGSCEDVSYESNMMLTTTALSGAVSKIEEKHRDLCRLVMQFIPPTMPLQLPGSVFRTFL 532
Query: 2468 QNFLLKNRGADHNLAHSGISSNSVIVSLYTVILHFLSEGF 2587
QN LLKNRGAD N+ G+SSNSVIVSLYTVILHFLSEGF
Sbjct: 533 QNLLLKNRGADRNVPPPGVSSNSVIVSLYTVILHFLSEGF 572
>ref|XP_004160505.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Cucumis sativus]
Length = 772
Score = 791 bits (2042), Expect = 0.0
Identities = 375/569 (65%), Positives = 453/569 (79%)
Frame = +2
Query: 884 SPRIGGMSSGLAVILAGEDRRAKTQKAHLVSNCDEIGQQPVERTLEHIFDLPYKTIDPST 1063
SPRIGG+SSGLAVIL D R + K S CDE Q VERTLE++F LP K+I+P T
Sbjct: 5 SPRIGGLSSGLAVILNDNDNRGSSSKGRCFSYCDEFNHQSVERTLEYVFGLPNKSINPLT 64
Query: 1064 CRIDDDFARSIVKNEVLKFQDLNCVYSNRDGICILNNGFGPHTVAIDEASICGDIRILKQ 1243
+D F RSI+KN+ + + +GICI++NG G + V I++ SICGDIRI+K
Sbjct: 65 SPVDTAFIRSIIKNKFSELARPIAHHGVGNGICIVDNGLGSNVVCIEKVSICGDIRIVKP 124
Query: 1244 PLLVESLAMFSSARANSCVWKGKWMYEVILETSGVQQLGWATFSCPFTNHKGVGDAEDSY 1423
PLLVES +MFSSARAN+CVW GKWMYEVILETSG+QQLGWAT +CPFT+H+GVGDA+DSY
Sbjct: 125 PLLVESFSMFSSARANACVWSGKWMYEVILETSGIQQLGWATLACPFTDHEGVGDADDSY 184
Query: 1424 AFDGRRVTKWNKDAETYGQSWVIGDVIGCCIDLDHDEISFYRNGVSLGVAFDTVRKMEPG 1603
AFDGRRV KWNK+AE YGQSWV+GDVIGCCIDLD +EISFYRNG+SLGVAF VRKM PG
Sbjct: 185 AFDGRRVRKWNKEAERYGQSWVVGDVIGCCIDLDRNEISFYRNGISLGVAFSGVRKMGPG 244
Query: 1604 LGYYPAVSLSQGERCDLNFGSRPFKYPIGGFLPLQAPPASNSLATYXXXXXXXXXXXQFV 1783
+GYYPA+SLSQGERC++NFG+ PFKYPI G+LPLQAPP+ N A++ + +
Sbjct: 245 IGYYPAISLSQGERCEINFGAHPFKYPIDGYLPLQAPPSINDFASHMLKCLSRILEEKRI 304
Query: 1784 EKAASTSVEKLRRLKRFSPLEDLFHPISHVICEELFSAIDMEAGHSEYIGWGPFVSFLME 1963
E SVEKLRRLKRF +E+LF P+S IC+E FSA++++A EYIG GPF++F+ME
Sbjct: 305 ECLEINSVEKLRRLKRFVSVEELFRPVSIGICDEFFSALEVDANGIEYIGRGPFLAFMME 364
Query: 1964 IFGKRAPHDYERLDRVLSLFLEYRGSHGVFQHAINALSCSCKTSSLVLMDCPFSGSYSYL 2143
+FG++ PH++ LDR++ + L +GS +F+H INALSCSCKTS LVL +CP+SGSYSYL
Sbjct: 365 VFGQQPPHNHSSLDRIIDVLLRCQGSLALFEHLINALSCSCKTSPLVLTECPYSGSYSYL 424
Query: 2144 ALTCHILRQEELMVLCWNSSDFEFLLEGFLSRKGPNKQDLQYLMPSVWWPGSCEDVSHEG 2323
AL CH+ R+EEL+VL W S DFEFL EGFLSRK PNKQDL+Y+MPSVWWPGS EDVS+E
Sbjct: 425 ALACHMFRREELLVLWWKSVDFEFLFEGFLSRKNPNKQDLEYMMPSVWWPGSREDVSYES 484
Query: 2324 SMMMTTTALSEAVTKIEEMHRELCRLVIQFIPPIAPPQLPGSVFRTFLQNFLLKNRGADH 2503
SM +TTTALSEA+ +IEE HR+LCRLVIQFIPP PQLPGSVFRTFLQN LLKNRG DH
Sbjct: 485 SMDLTTTALSEAINEIEEKHRDLCRLVIQFIPPTTSPQLPGSVFRTFLQNLLLKNRGTDH 544
Query: 2504 NLAHSGISSNSVIVSLYTVILHFLSEGFG 2590
N + SG+ SNS++VSLY VILHFLSEGFG
Sbjct: 545 NASPSGVLSNSIVVSLYAVILHFLSEGFG 573
>ref|XP_004141957.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Cucumis sativus]
Length = 1270
Score = 791 bits (2042), Expect = 0.0
Identities = 375/569 (65%), Positives = 453/569 (79%)
Frame = +2
Query: 884 SPRIGGMSSGLAVILAGEDRRAKTQKAHLVSNCDEIGQQPVERTLEHIFDLPYKTIDPST 1063
SPRIGG+SSGLAVIL D R + K S CDE Q VERTLE++F LP K+I+P T
Sbjct: 5 SPRIGGLSSGLAVILNDNDNRGSSSKGRCFSYCDEFNHQSVERTLEYVFGLPNKSINPLT 64
Query: 1064 CRIDDDFARSIVKNEVLKFQDLNCVYSNRDGICILNNGFGPHTVAIDEASICGDIRILKQ 1243
+D F RSI+KN+ + + +GICI++NG G + V I++ SICGDIRI+K
Sbjct: 65 SPVDTAFIRSIIKNKFSELARPIAHHGVGNGICIVDNGLGSNVVCIEKVSICGDIRIVKP 124
Query: 1244 PLLVESLAMFSSARANSCVWKGKWMYEVILETSGVQQLGWATFSCPFTNHKGVGDAEDSY 1423
PLLVES +MFSSARAN+CVW GKWMYEVILETSG+QQLGWAT +CPFT+H+GVGDA+DSY
Sbjct: 125 PLLVESFSMFSSARANACVWSGKWMYEVILETSGIQQLGWATLACPFTDHEGVGDADDSY 184
Query: 1424 AFDGRRVTKWNKDAETYGQSWVIGDVIGCCIDLDHDEISFYRNGVSLGVAFDTVRKMEPG 1603
AFDGRRV KWNK+AE YGQSWV+GDVIGCCIDLD +EISFYRNG+SLGVAF VRKM PG
Sbjct: 185 AFDGRRVRKWNKEAERYGQSWVVGDVIGCCIDLDRNEISFYRNGISLGVAFSGVRKMGPG 244
Query: 1604 LGYYPAVSLSQGERCDLNFGSRPFKYPIGGFLPLQAPPASNSLATYXXXXXXXXXXXQFV 1783
+GYYPA+SLSQGERC++NFG+ PFKYPI G+LPLQAPP+ N A++ + +
Sbjct: 245 IGYYPAISLSQGERCEINFGAHPFKYPIDGYLPLQAPPSINDFASHMLKCLSRILEEKRI 304
Query: 1784 EKAASTSVEKLRRLKRFSPLEDLFHPISHVICEELFSAIDMEAGHSEYIGWGPFVSFLME 1963
E SVEKLRRLKRF +E+LF P+S IC+E FSA++++A EYIG GPF++F+ME
Sbjct: 305 ECLEINSVEKLRRLKRFVSVEELFRPVSIGICDEFFSALEVDANGIEYIGRGPFLAFMME 364
Query: 1964 IFGKRAPHDYERLDRVLSLFLEYRGSHGVFQHAINALSCSCKTSSLVLMDCPFSGSYSYL 2143
+FG++ PH++ LDR++ + L +GS +F+H INALSCSCKTS LVL +CP+SGSYSYL
Sbjct: 365 VFGQQPPHNHSSLDRIIDVLLRCQGSLALFEHLINALSCSCKTSPLVLTECPYSGSYSYL 424
Query: 2144 ALTCHILRQEELMVLCWNSSDFEFLLEGFLSRKGPNKQDLQYLMPSVWWPGSCEDVSHEG 2323
AL CH+ R+EEL+VL W S DFEFL EGFLSRK PNKQDL+Y+MPSVWWPGS EDVS+E
Sbjct: 425 ALACHMFRREELLVLWWKSVDFEFLFEGFLSRKNPNKQDLEYMMPSVWWPGSREDVSYES 484
Query: 2324 SMMMTTTALSEAVTKIEEMHRELCRLVIQFIPPIAPPQLPGSVFRTFLQNFLLKNRGADH 2503
SM +TTTALSEA+ +IEE HR+LCRLVIQFIPP PQLPGSVFRTFLQN LLKNRG DH
Sbjct: 485 SMDLTTTALSEAINEIEEKHRDLCRLVIQFIPPTTSPQLPGSVFRTFLQNLLLKNRGTDH 544
Query: 2504 NLAHSGISSNSVIVSLYTVILHFLSEGFG 2590
N + SG+ SNS++VSLY VILHFLSEGFG
Sbjct: 545 NASPSGVLSNSIVVSLYAVILHFLSEGFG 573
>ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
Length = 1269
Score = 790 bits (2041), Expect = 0.0
Identities = 365/570 (64%), Positives = 458/570 (80%), Gaps = 2/570 (0%)
Frame = +2
Query: 884 SPRIGGMSSGLAVILAGEDRRAKTQKAHLVSNCDEIGQQPVERTLEHIFDLPYKTIDPST 1063
SPR+GG S+GLAVIL G+D + + K L+S CD++GQQ VERTLE++F LP ++++ T
Sbjct: 5 SPRVGGFSAGLAVILNGKDGKKNSPKTRLISCCDDLGQQSVERTLEYVFGLPNRSLNSLT 64
Query: 1064 CRIDDDFARSIVKNEVLKFQDL-NCVYSNRDGICILN-NGFGPHTVAIDEASICGDIRIL 1237
+D DF RS+++N+ ++ N Y RDGIC+ NG GP + ++E+SICGDI+++
Sbjct: 65 GPVDRDFIRSVIRNDFSRYNGKSNYSYRERDGICVNGKNGNGPDVIGLEESSICGDIKVI 124
Query: 1238 KQPLLVESLAMFSSARANSCVWKGKWMYEVILETSGVQQLGWATFSCPFTNHKGVGDAED 1417
K P L+ES+AMFSSARA++CVWKGKWMYEV+LETSG+QQLGWAT SCPFT+HKGVGDA+D
Sbjct: 125 KSPFLIESMAMFSSARASACVWKGKWMYEVMLETSGIQQLGWATLSCPFTDHKGVGDADD 184
Query: 1418 SYAFDGRRVTKWNKDAETYGQSWVIGDVIGCCIDLDHDEISFYRNGVSLGVAFDTVRKME 1597
SYA+DGRRV+KWNKDAETYGQSWV+GD+IGCCIDLD DEI FYRNG SLGVAF +RK+
Sbjct: 185 SYAYDGRRVSKWNKDAETYGQSWVVGDIIGCCIDLDRDEIIFYRNGNSLGVAFQGIRKLG 244
Query: 1598 PGLGYYPAVSLSQGERCDLNFGSRPFKYPIGGFLPLQAPPASNSLATYXXXXXXXXXXXQ 1777
PG GYYPAVSLSQGERC+LNFG+RPFKYP+ G+LPLQAPP+ + T
Sbjct: 245 PGFGYYPAVSLSQGERCELNFGARPFKYPVEGYLPLQAPPSRSYFVTQLLQCWSRLLDMH 304
Query: 1778 FVEKAASTSVEKLRRLKRFSPLEDLFHPISHVICEELFSAIDMEAGHSEYIGWGPFVSFL 1957
VE+A + KLRR+KR LE++FHP S+ ICEELFS ++ + G +EY+ WGP +SF+
Sbjct: 305 SVERAEHSLARKLRRVKRSVSLEEIFHPASYSICEELFSILEADVGITEYMVWGPMLSFM 364
Query: 1958 MEIFGKRAPHDYERLDRVLSLFLEYRGSHGVFQHAINALSCSCKTSSLVLMDCPFSGSYS 2137
E+FG APHDY LD+V+ + L+++GSH +F+H +NALSC CK +SLVL +CP+SGSYS
Sbjct: 365 FEVFGLHAPHDYLSLDKVVEVLLQFQGSHVLFEHILNALSCGCKIASLVLTECPYSGSYS 424
Query: 2138 YLALTCHILRQEELMVLCWNSSDFEFLLEGFLSRKGPNKQDLQYLMPSVWWPGSCEDVSH 2317
+LAL CH+LR EELMVL W S DFEFL EGFLSRK PNKQDL ++P+VWWP SCED SH
Sbjct: 425 HLALACHLLRLEELMVLWWKSPDFEFLFEGFLSRKTPNKQDLDSMIPTVWWPSSCEDASH 484
Query: 2318 EGSMMMTTTALSEAVTKIEEMHRELCRLVIQFIPPIAPPQLPGSVFRTFLQNFLLKNRGA 2497
EG+MM+TTTALSE+++KIEE HR+LCRLVIQFIPP PPQLPG+VFRTFLQ+ LLKNRGA
Sbjct: 485 EGNMMLTTTALSESISKIEEKHRDLCRLVIQFIPPTNPPQLPGAVFRTFLQSLLLKNRGA 544
Query: 2498 DHNLAHSGISSNSVIVSLYTVILHFLSEGF 2587
N+ G+SSNSV+VS+YTV+LHFLSEGF
Sbjct: 545 QRNIPPPGVSSNSVLVSIYTVVLHFLSEGF 574
>emb|CBI21499.3| unnamed protein product [Vitis vinifera]
Length = 1259
Score = 788 bits (2036), Expect = 0.0
Identities = 391/580 (67%), Positives = 459/580 (79%), Gaps = 1/580 (0%)
Frame = +2
Query: 851 MAEEGQRIGGFSPRIGGMSSGLAVILAGEDRRAKTQKAHLVSNCDEIGQQPVERTLEHIF 1030
MAE+G R GG +SSGLAVIL G D+R + K+HLVS CDE G Q VERTLEHIF
Sbjct: 1 MAEDGLRTGG-------LSSGLAVILNGGDKRESSSKSHLVSYCDEFGHQSVERTLEHIF 53
Query: 1031 DLPYKTIDPSTCRIDDDFARSIVKNEVLKFQ-DLNCVYSNRDGICILNNGFGPHTVAIDE 1207
DLPYK+I P +D + R+I+KN+ L+F + + + SNRDG+ I + G +TVAI+E
Sbjct: 54 DLPYKSISPLNGPVDTNLIRAIIKNDFLRFYINPDDLGSNRDGVYI-DKSSGSNTVAIEE 112
Query: 1208 ASICGDIRILKQPLLVESLAMFSSARANSCVWKGKWMYEVILETSGVQQLGWATFSCPFT 1387
+SICGDIRI+K PLL+ESL MFSSARAN CVWKGKWMYEVILETSG+QQLGWAT SCPFT
Sbjct: 113 SSICGDIRIIKPPLLLESLGMFSSARANVCVWKGKWMYEVILETSGIQQLGWATLSCPFT 172
Query: 1388 NHKGVGDAEDSYAFDGRRVTKWNKDAETYGQSWVIGDVIGCCIDLDHDEISFYRNGVSLG 1567
+HKGVGDA+DSYAFDG+RV+KWNK+AETYGQSWV+GDVIGCCIDLD+DEISFYRNG+SLG
Sbjct: 173 DHKGVGDADDSYAFDGKRVSKWNKEAETYGQSWVVGDVIGCCIDLDNDEISFYRNGMSLG 232
Query: 1568 VAFDTVRKMEPGLGYYPAVSLSQGERCDLNFGSRPFKYPIGGFLPLQAPPASNSLATYXX 1747
VAF +RKM G+GYYPA+SLSQGERC+LNFG RPFKYPI GFL LQAPP++NSLAT
Sbjct: 233 VAFHGIRKMGAGVGYYPAISLSQGERCELNFGGRPFKYPIEGFLSLQAPPSANSLATCLL 292
Query: 1748 XXXXXXXXXQFVEKAASTSVEKLRRLKRFSPLEDLFHPISHVICEELFSAIDMEAGHSEY 1927
Q +E+A SVEKLRRLKRF F+ +D E G EY
Sbjct: 293 RCLSRLVEMQCMERAEFNSVEKLRRLKRF-----------------FFALLDAERGSMEY 335
Query: 1928 IGWGPFVSFLMEIFGKRAPHDYERLDRVLSLFLEYRGSHGVFQHAINALSCSCKTSSLVL 2107
+GWG +SF+ME+FG +APHDY LD+VL L LE++GS+ + + INALSCSCKT+SLVL
Sbjct: 336 VGWGSLLSFMMEVFGMQAPHDYTSLDKVLDLLLEFQGSNLILEQVINALSCSCKTASLVL 395
Query: 2108 MDCPFSGSYSYLALTCHILRQEELMVLCWNSSDFEFLLEGFLSRKGPNKQDLQYLMPSVW 2287
+CP++G YSYLAL CH+LR+EELM+L W SSDFE EGFLS K PNKQDLQ +MPSVW
Sbjct: 396 TECPYTGPYSYLALACHMLRREELMLLWWKSSDFELSFEGFLSCKSPNKQDLQCMMPSVW 455
Query: 2288 WPGSCEDVSHEGSMMMTTTALSEAVTKIEEMHRELCRLVIQFIPPIAPPQLPGSVFRTFL 2467
WPGSCEDVS+E +MM+TTTALS AV+KIEE HR+LCRLV+QFIPP P QLPGSVFRTFL
Sbjct: 456 WPGSCEDVSYESNMMLTTTALSGAVSKIEEKHRDLCRLVMQFIPPTMPLQLPGSVFRTFL 515
Query: 2468 QNFLLKNRGADHNLAHSGISSNSVIVSLYTVILHFLSEGF 2587
QN LLKNRGAD N+ G+SSNSVIVSLYTVILHFLSEGF
Sbjct: 516 QNLLLKNRGADRNVPPPGVSSNSVIVSLYTVILHFLSEGF 555