BLASTX nr result
ID: Coptis24_contig00004564
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004564
(1789 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37848.3| unnamed protein product [Vitis vinifera] 268 3e-69
ref|XP_004147075.1| PREDICTED: uncharacterized protein LOC101207... 239 2e-60
ref|XP_004158401.1| PREDICTED: uncharacterized LOC101207030 [Cuc... 232 2e-58
ref|XP_002513803.1| translation initiation factor if-3, putative... 197 1e-47
ref|XP_003535756.1| PREDICTED: uncharacterized protein LOC100306... 192 2e-46
>emb|CBI37848.3| unnamed protein product [Vitis vinifera]
Length = 759
Score = 268 bits (685), Expect = 3e-69
Identities = 207/584 (35%), Positives = 286/584 (48%), Gaps = 46/584 (7%)
Frame = -2
Query: 1653 MVLWSRIRCSRIK--NLTNQCNKRNXXXXXXXXXXXSPAITKARIFER-----HRPPQLY 1495
M W RI ++K LT Q + + +P T R FE R P +
Sbjct: 1 MSFWHRINQPKLKWQTLTRQFKRCSLQIPHAHSLNNTPRQT-IRGFENPCWVNRRNPSDF 59
Query: 1494 C-PIRFFAAPILANQPKAESKVEKRTRLNDQITAEWIRLVSDEGHVVVSMREALDRAKKL 1318
C +RFFAAP+ A +PK E K R+NDQI A+++RLV+D+GH +VS AL+RA+KL
Sbjct: 60 CYNVRFFAAPVQA-KPKQEEKDASGPRMNDQIRADFVRLVTDDGHEIVSRMVALERARKL 118
Query: 1317 KMDLVEVDRVAKPPVCKIMDXXXXXXXXXXXXXXXXXXXXEGTIRKGSPKEIRFTEKTEQ 1138
K+DLVEV R A PPVCKIMD E T+RKG KE+RF+ KTE
Sbjct: 119 KLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVRFSGKTEA 178
Query: 1137 KDLQTKADTVKKMMEKGHRVKCMAVGKEDQDLGGMLARLSSLIEDVAIVESGPNVEKKQA 958
KDL+ KAD VK++M++G+RVKCMA+G EDQDLGG+L RLSSLIEDV VESGP VEK+QA
Sbjct: 179 KDLKMKADMVKRLMDRGYRVKCMAMGTEDQDLGGLLTRLSSLIEDVCFVESGPRVEKRQA 238
Query: 957 YVIVRHMKFGPT---XXXXXXXXXXXXXXXKATLD---------SGPEQGPLLMEEESID 814
YVIVRH+KFGP+ AT+ S + P+ +E ES
Sbjct: 239 YVIVRHIKFGPSKKGSGKKASKVVGVTSSEAATMSPTISPTINPSSHVESPIQLEVESDT 298
Query: 813 AQSNSESENDIHTDQKQV------------LGEKITTWSTFDANEDFEEVFDLGDNKDVV 670
A+S+ E+E+++ +D+ L + TWS FDAN+DF++VFD ++ +
Sbjct: 299 AESDLENEDEVLSDEADTPISPSMRMADKNLEDNKATWSVFDANDDFDKVFDFTNDAN-P 357
Query: 669 SSSITRHMGVETNGVFPPENVANASLPHS-KPELRSTHPKS-PSSIGENRYSGRNENRYG 496
S+S + + EN+ + + H +P L ST S PSS+ E N R
Sbjct: 358 SNSTDKQTNAKLETSSSLENINLSDIMHGPRPVLDSTRTNSVPSSLTEPPPETLNRYR-- 415
Query: 495 GRSEVRSGVQPTNS-TAKTAYNTKVSEFSPAHLSQTNRASGSTNTVHQGSDSPYQGRQSP 319
+SE R+ PT S K T P L+Q +A TN+ + G +
Sbjct: 416 -KSEPRNRFMPTTSMDNKGPGATNSLRLGPQFLNQGKQARSDTNSSPSTGRTRQDGTDAS 474
Query: 318 PFVGENRYAPRREVRSGVQPTNSTAKTAYNTKPSE---SPVHMRQSNRVPGATNTVHHGS 148
F N P E+ P ++ + +PS S + ++ + N+
Sbjct: 475 VF--RNLKLPLHEI-----PMQEPSRPPSSPRPSYGDFSALKAEAPGKLDPSANSARSEP 527
Query: 147 DSPYQGRQS------PPFVGENRYAP--RREVRNGVQPINSTAK 40
P QG+QS P G + P RN P N K
Sbjct: 528 RLPNQGKQSWSDLNFVPSTGGTKQVPADTSVSRNSKPPTNDGPK 571
>ref|XP_004147075.1| PREDICTED: uncharacterized protein LOC101207030 [Cucumis sativus]
Length = 566
Score = 239 bits (609), Expect = 2e-60
Identities = 168/508 (33%), Positives = 256/508 (50%), Gaps = 23/508 (4%)
Frame = -2
Query: 1512 RPPQLYCPIRFFAAPI-LANQPKAESKVEKRTRLNDQITAEWIRLVSDEGHVVVSMREAL 1336
RP RF+AAP+ K E K + RLND+I A+++RLVSD+GH ++S+R+AL
Sbjct: 51 RPADFADKFRFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDAL 110
Query: 1335 DRAKKLKMDLVEVDRVAKPPVCKIMDXXXXXXXXXXXXXXXXXXXXEGTIRKGSPKEIRF 1156
RA++LK+DLVEV + A PPVCK+MD E ++K KE+RF
Sbjct: 111 KRARELKLDLVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRF 170
Query: 1155 TEKTEQKDLQTKADTVKKMMEKGHRVKCMAVGKEDQDLGGMLARLSSLIEDVAIVESGPN 976
T KTE+KDL+ KAD VK++ME+G+RVKC A G E+QDLG +L+RL++LIEDVA+VE+GP+
Sbjct: 171 TGKTEEKDLRMKADMVKRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPS 230
Query: 975 VEKKQAYVIVRHMKFGPTXXXXXXXXXXXXXXXKATLDSGPEQGPLLMEEESIDAQSNSE 796
VEK QA++IVRH+KFGP+ + + +G PL+ ++D + E
Sbjct: 231 VEKGQAFIIVRHVKFGPSKKGGGSKASKVVANAEQKVQNG--STPLV---STVDPEDGFE 285
Query: 795 SENDIHTDQKQVLGEKITTWSTFDANEDFEEVFDLGDNKDVV-SSSITRHMGVETNGVFP 619
S + TTW T D D +E FDL D+++V+ S++ T+ M V ++
Sbjct: 286 SSEE-------------TTW-TVDGTSDSDEAFDLKDDRNVITSTTATKKMNVVSDRDV- 330
Query: 618 PENVANASLPHSKPELRSTHPKSPSSIGENRYSGRNENRYGGRSEVRSG---------VQ 466
P++ +S+P + + P I E + N G R +RSG Q
Sbjct: 331 PDSGRTSSVPLFQQDSSIKTDNRPKKI-EPMNHFQPPNSQGARDSLRSGPQIREPVNRFQ 389
Query: 465 PTNSTAKTAYNTKVSEFSPAHLSQTNRASGSTNTVHQGSDSPYQGRQSPPFVGENRYAP- 289
P N+T + + + S S + + N + S +S P + + R+ P
Sbjct: 390 PPNATDRYSQGARDSLRSEPQIREPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPP 449
Query: 288 --------RREVRSGVQPTNSTAKTAYNTKPSESPVHMRQSNRVPGATN-TVHHGSDSPY 136
RE R T+ + +++ + +P S+ P T+ + S+S
Sbjct: 450 PNTNFSPTMRESRQYDNNTSVSRNINHSSNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNA 509
Query: 135 QGRQSPPFVG--ENRYAPRREVRNGVQP 58
G+Q PP G NR P + N P
Sbjct: 510 PGKQDPPATGYQGNRGPPYTRLTNPNAP 537
>ref|XP_004158401.1| PREDICTED: uncharacterized LOC101207030 [Cucumis sativus]
Length = 536
Score = 232 bits (592), Expect = 2e-58
Identities = 166/490 (33%), Positives = 248/490 (50%), Gaps = 5/490 (1%)
Frame = -2
Query: 1512 RPPQLYCPIRFFAAPI-LANQPKAESKVEKRTRLNDQITAEWIRLVSDEGHVVVSMREAL 1336
RP RF+AAP+ K E K + RLND+I A+++RLVSD+GH ++S+R+AL
Sbjct: 51 RPADFADKFRFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDAL 110
Query: 1335 DRAKKLKMDLVEVDRVAKPPVCKIMDXXXXXXXXXXXXXXXXXXXXEGTIRKGSPKEIRF 1156
RA++LK+DLVEV + A PPVCK+MD E ++K KE+RF
Sbjct: 111 KRARELKLDLVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRF 170
Query: 1155 TEKTEQKDLQTKADTVKKMMEKGHRVKCMAVGKEDQDLGGMLARLSSLIEDVAIVESGPN 976
T KTE+KDL+ KAD VK++ME+G+RVKC A G E+QDLG +L+RL++LIEDVA+VE+GP+
Sbjct: 171 TGKTEEKDLRMKADMVKRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPS 230
Query: 975 VEKKQAYVIVRHMKFGPTXXXXXXXXXXXXXXXKATLDSGPEQGPLLMEEESIDAQSNSE 796
VEK QA++IVRH+KFGP+ + + +G PL+ ++D + E
Sbjct: 231 VEKGQAFIIVRHVKFGPSKKGGGSKASKVVANAEQKVQNG--STPLV---STVDPEDGFE 285
Query: 795 SENDIHTDQKQVLGEKITTWSTFDANEDFEEVFDLGDNKDVV-SSSITRHMGVETNGVFP 619
S + TTW T D D +E FDL D ++V+ S++ T+ M V ++
Sbjct: 286 SSEE-------------TTW-TVDGTSDSDEAFDLKDARNVITSTTATKKMNVVSDRDV- 330
Query: 618 PENVANASLPHSKPELRSTHPKSPSSIGENRYSGRNENRYGGRSEVRSGVQPTNSTAKTA 439
P++ +S+P + + P I E + N G R +RSG Q
Sbjct: 331 PDSGRTSSVPLFQQDSSIKTDNRPKKI-EPMNHFQPPNSQGARDSLRSGPQ--------- 380
Query: 438 YNTKVSEFSPAHLSQTNRASGSTNTVHQGSDSPYQGRQSPPFVGENRYAPRREVRSGVQP 259
++ F P ++ T+R S + R PP N RE R
Sbjct: 381 IREPMNRFQPPNV--TDRYSRGARDSLRSEPQIRDQRWHPP-PNTNFSPTMRESRQYDNN 437
Query: 258 TNSTAKTAYNTKPSESPVHMRQSNRVPGATN-TVHHGSDSPYQGRQSPPFVG--ENRYAP 88
T+ + +++ + +P S+ P T+ + S+S G+Q PP G NR P
Sbjct: 438 TSVSRNINHSSNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNAPGKQDPPATGYQGNRGPP 497
Query: 87 RREVRNGVQP 58
+ N P
Sbjct: 498 YTRLTNPNAP 507
>ref|XP_002513803.1| translation initiation factor if-3, putative [Ricinus communis]
gi|223546889|gb|EEF48386.1| translation initiation factor
if-3, putative [Ricinus communis]
Length = 572
Score = 197 bits (500), Expect = 1e-47
Identities = 160/456 (35%), Positives = 226/456 (49%), Gaps = 65/456 (14%)
Frame = -2
Query: 1488 IRFFAAPILANQPKAESKVEKRTRLNDQITAEWIRLVSDEGHVVVSMREALDRAKKLKMD 1309
+RFFA +A++K + RLNDQIT+++IRLV+DEGH VV REAL+RAKKLK+D
Sbjct: 67 VRFFATSF-----QAKTK-DNGPRLNDQITSQFIRLVTDEGHGVVPRREALERAKKLKLD 120
Query: 1308 LVEVDRVAKPPVCKIMDXXXXXXXXXXXXXXXXXXXXEGTIRKGSPKEIRFTEKTEQKDL 1129
LVEVDR PPVCKIMD E T+RKG KE+RF+ KTEQKDL
Sbjct: 121 LVEVDRNVDPPVCKIMDFNKEKYKQQSKEKDRVKSKSEVTLRKGDCKEVRFSAKTEQKDL 180
Query: 1128 QTKADTVKKMMEKGHRVKCMAVG-----------------------------KEDQDLGG 1036
+ KAD+V ++ME+G+RVKCMA+G +E ++L
Sbjct: 181 KIKADSVIRLMERGYRVKCMALGSPKKGGRASKKHDGDLTEEEIAERIKQEEEEKEELRA 240
Query: 1035 MLARLSSLIEDVAIVESGPNVEKKQAYVIVRHMKFGPTXXXXXXXXXXXXXXXKATLD-- 862
L+RL++L+ D I+ESGP VEKKQAYV+VRH KFG + A
Sbjct: 241 TLSRLTALMGDEFIIESGPRVEKKQAYVLVRHAKFGQSKKVGAKKFKDVQEVANAKSSAN 300
Query: 861 -SGPEQGPLLMEEESIDAQSNSESENDIHTDQKQVLGE----KITTWSTFDANEDFEEVF 697
SGP L+ E++S ++S E+E+ I +D+ V E TTWS D+ + F+ F
Sbjct: 301 HSGPVANSLMAEKDS--SESAVETEDKILSDEDDVPDEICEDNKTTWSIADSTDGFDGAF 358
Query: 696 DLG-DNKD----------VVSSSITRHMGVETNGVFPPENVANA-SLPHS-KPELRSTHP 556
G D+KD + + + + VF P+ ++ LP S +P L + +
Sbjct: 359 AHGTDDKDPSIYCREDMNIPRKANSSGLNFSIPNVFQPKPAQDSQQLPSSPQPSLGTINR 418
Query: 555 -------------KSPSSIG-ENRYSGRNENRYGGRSEVRSGVQPTNSTAKTAYNTKVSE 418
K P S+G ENRY R + + R +P A + ++S
Sbjct: 419 YKPQPSLGTEKKYKPPPSLGTENRYKVRQQFPLNTSRDSRGPDKP----ASFGFEPRLSP 474
Query: 417 FSPAHLSQTNRAS--GSTNTVHQGSDSPYQGRQSPP 316
S S+ N S G + V S S ++ + PP
Sbjct: 475 RSGHSQSEINVTSSIGESKPVRTDS-SAFRNMKLPP 509
>ref|XP_003535756.1| PREDICTED: uncharacterized protein LOC100306622 [Glycine max]
Length = 547
Score = 192 bits (489), Expect = 2e-46
Identities = 167/544 (30%), Positives = 231/544 (42%), Gaps = 21/544 (3%)
Frame = -2
Query: 1653 MVLWSRIRCSRIKNLTNQCNKRNXXXXXXXXXXXSPA-ITKARIFERHRPPQLYCPIRFF 1477
M W RIR +K L Q + P I RP ++ +RFF
Sbjct: 1 MAFWHRIRNPNLKTLCIQFQRCYVHRPHASTPKPFPVDIPHPNSVFHGRPTSVFNTVRFF 60
Query: 1476 AAPILANQPKAESKVEKRTRLNDQITAEWIRLVSDEGHVVVSMR-EALDRAKKLKMDLVE 1300
AAP+ + RLN++I A ++RLV+D+GH + R EAL+ AK LK+DLVE
Sbjct: 61 AAPVQYQVKHNNVEDSSELRLNEKIKAPYVRLVADDGHHSILPRFEALEHAKTLKLDLVE 120
Query: 1299 VDRVAKPPVCKIMDXXXXXXXXXXXXXXXXXXXXEGTIRKGSPKEIRFTEKTEQKDLQTK 1120
VD+ AKPPVCKIMD E T+RK KE+RF+EKTE KDL+ K
Sbjct: 121 VDKNAKPPVCKIMDFHKQMYRRQEREKERAKSRAEMTLRK-DVKEVRFSEKTEAKDLKNK 179
Query: 1119 ADTVKKMMEKGHRVKCMAVGKEDQDLGGMLARLSSLIEDVAIVESGPNVEKKQAYVIVRH 940
AD +KK+MEKG+RVKC GKE+QDL + + + +L+EDV IVESGP++ KK A++IVRH
Sbjct: 180 ADMIKKLMEKGYRVKCKVSGKENQDLTVLFSPILALMEDVCIVESGPHMAKKDAFMIVRH 239
Query: 939 MKFGPTXXXXXXXXXXXXXXXKATLDSGPEQGPLLMEEESIDAQSNSESENDIHTDQKQV 760
+K+G T G + +SI+ +S++ES
Sbjct: 240 IKYG----LSKKGGKKLQNATNVTTQEGDMEISTANSSDSIEYESHAES----------- 284
Query: 759 LGEKITTWSTFDANEDFEEVFDLGDNKDVVSSSITRHMGVETNGVFPPENVANASLPHSK 580
E EEV G+ S S+ + N P N NA+ P +
Sbjct: 285 ------------GFETEEEVLSDGNKLSKSSLSVFSN---NVNMTASPNNQTNAA-PEAS 328
Query: 579 PELRSTHPKSPSSIGENRYSGRNENRYGGRSEVRSGVQPTNSTAKTAYNTKVSEFSPAHL 400
P + ENRY + N V+S Q + + Y P
Sbjct: 329 P------------VSENRYRSQENN-------VQSNAQVPPAVTENRY----KRIEPR-- 363
Query: 399 SQTNRASGSTNTVHQGSDSPYQGRQSPPFVGENRYAPRREVRSGVQPTNSTAKTAYNTKP 220
+ + S +T +QG + R PP R AP V + + P + A+ T P
Sbjct: 364 GRFQQTSNNTCMNYQGPGARDAFRSPPPNWNRTRQAP---VNANLNPRIENNRLAF-TPP 419
Query: 219 S---ESPVHMRQSNRVPGATNT----------------VHHGSDSPYQGRQSPPFVGENR 97
P H N P A NT +HHG + + F G N
Sbjct: 420 GPRHSMPSHENICNPPPNAPNTPRPGYGNFSSPSEGIPMHHGVPNTPRSSSYGNFSGPNE 479
Query: 96 YAPR 85
PR
Sbjct: 480 GIPR 483