BLASTX nr result

ID: Coptis24_contig00004552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004552
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64557.1| hypothetical protein VITISV_040161 [Vitis vinifera]   117   1e-24
ref|XP_002305438.1| predicted protein [Populus trichocarpa] gi|2...   116   3e-24
ref|XP_002313784.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]   115   9e-24
ref|XP_004163006.1| PREDICTED: uncharacterized protein LOC101226...   114   2e-23

>emb|CAN64557.1| hypothetical protein VITISV_040161 [Vitis vinifera]
          Length = 273

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/117 (48%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = +2

Query: 287 FDNVKAEKAHAMKRYHRLRKIASLFRLLEIFIVLFLFS-WFSTQLPSVIQIITKYFKKFC 463
           FD VK EKA+AM+ YH LRK A+  R+LE+ + LF+   W S ++ + ++I ++Y ++ C
Sbjct: 6   FDXVKLEKANAMRXYHTLRKFANFLRVLEVSVALFIMLFWSSKRVSNAVKIFSEYLRELC 65

Query: 464 VLLISPRFVFLIGNAIIITLFVKSGQFXXXXXXXXXXXXXLYEEFVKNSENCQKIVT 634
           V+L +PRF+FLIGNAIIITLFVKSG+F             LY+E+V++SEN QK+V+
Sbjct: 66  VVLANPRFMFLIGNAIIITLFVKSGRFSGENPDRGNAEPDLYDEYVQHSENSQKVVS 122


>ref|XP_002305438.1| predicted protein [Populus trichocarpa] gi|222848402|gb|EEE85949.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/114 (51%), Positives = 79/114 (69%)
 Frame = +2

Query: 281 FSFDNVKAEKAHAMKRYHRLRKIASLFRLLEIFIVLFLFSWFSTQLPSVIQIITKYFKKF 460
           F+  N+K EKA+A+K++ +++KIASLFRL+EI +VL L S FS QLP  ++  ++YFK  
Sbjct: 4   FNITNIKIEKANAIKKHRKIQKIASLFRLIEIGLVLALISRFSIQLPVAVRNSSEYFKDL 63

Query: 461 CVLLISPRFVFLIGNAIIITLFVKSGQFXXXXXXXXXXXXXLYEEFVKNSENCQ 622
            V L+SPRFVF++GN I+ITLF KSGQF             LYEEFV+ SE  Q
Sbjct: 64  TVTLVSPRFVFVLGNVIVITLFAKSGQFSCQDSNGKNSSTDLYEEFVEKSEKSQ 117


>ref|XP_002313784.1| predicted protein [Populus trichocarpa] gi|222850192|gb|EEE87739.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  115 bits (289), Expect = 5e-24
 Identities = 58/115 (50%), Positives = 80/115 (69%)
 Frame = +2

Query: 281 FSFDNVKAEKAHAMKRYHRLRKIASLFRLLEIFIVLFLFSWFSTQLPSVIQIITKYFKKF 460
           F+  ++K EKA A+K++ ++RKIASLFRL+EI +VL L S FS QLP  ++  ++YFK  
Sbjct: 4   FNITSIKIEKAKAIKKHRKIRKIASLFRLIEIGVVLALISRFSIQLPVAVKNSSEYFKDL 63

Query: 461 CVLLISPRFVFLIGNAIIITLFVKSGQFXXXXXXXXXXXXXLYEEFVKNSENCQK 625
            V+L+SPRFVF++GN I+ITLF KSGQF             LY+EFV+ SE  Q+
Sbjct: 64  TVILVSPRFVFVLGNMIVITLFAKSGQFSGQDSNGKNPSTDLYDEFVEKSEKSQE 118


>emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]
          Length = 216

 Score =  115 bits (287), Expect = 9e-24
 Identities = 59/121 (48%), Positives = 80/121 (66%)
 Frame = +2

Query: 281 FSFDNVKAEKAHAMKRYHRLRKIASLFRLLEIFIVLFLFSWFSTQLPSVIQIITKYFKKF 460
           F  D++K EKA+A+ RY +LRKI +LFR++E+ +VL L S FS QLP  I++  +YF+  
Sbjct: 4   FEIDSIKVEKANAILRYRQLRKITNLFRVIEVCLVLILVSKFSFQLPFAIKVSGEYFRDL 63

Query: 461 CVLLISPRFVFLIGNAIIITLFVKSGQFXXXXXXXXXXXXXLYEEFVKNSENCQKIVTTT 640
            V LISPRFVF++GNAIII LF KSGQF             LY E V+ SE  +  ++T+
Sbjct: 64  SVTLISPRFVFVVGNAIIIILFAKSGQFSGQNQAEKYDETHLYNEIVEKSEKSRMEISTS 123

Query: 641 T 643
           T
Sbjct: 124 T 124


>ref|XP_004163006.1| PREDICTED: uncharacterized protein LOC101226152 [Cucumis sativus]
          Length = 228

 Score =  114 bits (285), Expect = 2e-23
 Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
 Frame = +2

Query: 284 SFDNVKAEKAHAMKRYHRLRKIASLFRLLEIFIVLFLFSWFSTQLPSVIQIITKYFKKFC 463
           +F +++ EKA+A+ +Y + RKIA+LFR +E+ ++L + S FS+ LP+ ++  T+YF+   
Sbjct: 5   NFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYFRCLS 64

Query: 464 VLLISPRFVFLIGNAIIITLFVKSGQFXXXXXXXXXXXXXLYEEFVKNSE-NCQK 625
           V LISPRFVFLIGNAI+ITLF KSGQF             LYEEF+KNSE N QK
Sbjct: 65  VTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQK 119


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