BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004549
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAL07973.1| plastid ribosomal protein PRPL5 [Platanus x acer...   119   2e-50
ref|XP_002511913.1| 50S ribosomal protein L5, putative [Ricinus ...   115   4e-48
gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]           114   4e-48
ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chlorop...   113   2e-47
ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chlorop...   114   6e-47

>emb|CAL07973.1| plastid ribosomal protein PRPL5 [Platanus x acerifolia]
          Length = 182

 Score =  119 bits (297), Expect(2) = 2e-50
 Identities = 58/66 (87%), Positives = 63/66 (95%)
 Frame = +2

Query: 2   PKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQRPVKTRARVSIATFKLREGQPIGLA 181
           PK+EKIVVNCGIGEAAQNSKGLD A+KDL++I GQRPVKTRARVSIATFKLREGQPIG+A
Sbjct: 7   PKIEKIVVNCGIGEAAQNSKGLDGAIKDLTLITGQRPVKTRARVSIATFKLREGQPIGIA 66

Query: 182 VTLRGN 199
           VT RGN
Sbjct: 67  VTHRGN 72



 Score =  107 bits (266), Expect(2) = 2e-50
 Identities = 49/53 (92%), Positives = 52/53 (98%)
 Frame = +1

Query: 319 IMYSFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSIGMREQGVFPEIRYDALG 477
           +MYSFLDRLINLGLPRTRDFQGV+PNSFDGHGNYSIG+REQ VFPEIRYDALG
Sbjct: 73  MMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGIREQSVFPEIRYDALG 125


>ref|XP_002511913.1| 50S ribosomal protein L5, putative [Ricinus communis]
           gi|223549093|gb|EEF50582.1| 50S ribosomal protein L5,
           putative [Ricinus communis]
          Length = 265

 Score =  115 bits (287), Expect(2) = 4e-48
 Identities = 53/66 (80%), Positives = 63/66 (95%)
 Frame = +2

Query: 2   PKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQRPVKTRARVSIATFKLREGQPIGLA 181
           PK+EK+VVNCGIGEAAQN+KGL+AAM DL++I GQRP+KTRAR SIATFK+REGQP+G+A
Sbjct: 89  PKIEKVVVNCGIGEAAQNAKGLEAAMNDLALITGQRPIKTRARNSIATFKIREGQPLGIA 148

Query: 182 VTLRGN 199
           VTLRGN
Sbjct: 149 VTLRGN 154



 Score =  103 bits (256), Expect(2) = 4e-48
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +1

Query: 319 IMYSFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSIGMREQGVFPEIRYDALG 477
           +MYSFLDRLINLGLPRTRDFQGVS NSFDGHGNYSIG+R+Q VFPEIR+DALG
Sbjct: 155 VMYSFLDRLINLGLPRTRDFQGVSQNSFDGHGNYSIGIRDQSVFPEIRFDALG 207


>gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]
          Length = 221

 Score =  114 bits (285), Expect(2) = 4e-48
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = +2

Query: 2   PKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQRPVKTRARVSIATFKLREGQPIGLA 181
           PKVEKIVVNCGIG+AAQN+KGLDAAM DL+ I GQRPVKTRA+ +IATFKLREGQPIGLA
Sbjct: 43  PKVEKIVVNCGIGDAAQNAKGLDAAMGDLANITGQRPVKTRAKKAIATFKLREGQPIGLA 102

Query: 182 VTLRGN 199
           VTLRGN
Sbjct: 103 VTLRGN 108



 Score =  103 bits (258), Expect(2) = 4e-48
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +1

Query: 319 IMYSFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSIGMREQGVFPEIRYDALG 477
           +MYSFLDRLINLGLPRTRDFQGV+ NSFDGHGN+SIG +EQGVFPEIRYDALG
Sbjct: 109 VMYSFLDRLINLGLPRTRDFQGVNSNSFDGHGNFSIGFKEQGVFPEIRYDALG 161


>ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chloroplastic [Vitis vinifera]
           gi|297745362|emb|CBI40442.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  113 bits (283), Expect(2) = 2e-47
 Identities = 52/66 (78%), Positives = 63/66 (95%)
 Frame = +2

Query: 2   PKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQRPVKTRARVSIATFKLREGQPIGLA 181
           PK+EKIV+NCGIG+A+QN+KGL+AAM +L++I GQRPVKTRAR SIATFKLREGQP+G+A
Sbjct: 87  PKIEKIVLNCGIGDASQNAKGLEAAMNELALIAGQRPVKTRARASIATFKLREGQPVGIA 146

Query: 182 VTLRGN 199
           VTLRGN
Sbjct: 147 VTLRGN 152



 Score =  102 bits (255), Expect(2) = 2e-47
 Identities = 46/53 (86%), Positives = 51/53 (96%)
 Frame = +1

Query: 319 IMYSFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSIGMREQGVFPEIRYDALG 477
           +MYSFLDRLINLGLPRTRDFQGV+PNSFDGHGNYSIGM++Q VFPEIR+D LG
Sbjct: 153 MMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGMKDQSVFPEIRFDILG 205


>ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine
           max]
          Length = 267

 Score =  114 bits (286), Expect(2) = 6e-47
 Identities = 52/66 (78%), Positives = 63/66 (95%)
 Frame = +2

Query: 2   PKVEKIVVNCGIGEAAQNSKGLDAAMKDLSIICGQRPVKTRARVSIATFKLREGQPIGLA 181
           PK+EKIVVNCGIG+AAQN+KGLDAA+ DL++I GQRP+KTRAR S+ATFK+REGQP+G+A
Sbjct: 89  PKIEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATFKIREGQPLGIA 148

Query: 182 VTLRGN 199
           VTLRGN
Sbjct: 149 VTLRGN 154



 Score = 99.8 bits (247), Expect(2) = 6e-47
 Identities = 44/53 (83%), Positives = 51/53 (96%)
 Frame = +1

Query: 319 IMYSFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSIGMREQGVFPEIRYDALG 477
           +MYSFLDR+INLGLPRTRDFQGV+PNSFDGHGNYSIG+++QGVFPEIR D +G
Sbjct: 155 MMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVG 207