BLASTX nr result

ID: Coptis24_contig00004544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004544
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27887.3| unnamed protein product [Vitis vinifera]               93   5e-18
ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266...    93   5e-18
ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267...    94   6e-18
ref|XP_002514131.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209...    87   3e-16

>emb|CBI27887.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 93.2 bits (230), Expect(2) = 5e-18
 Identities = 53/93 (56%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
 Frame = +1

Query: 355 FRSKSCGDDKMQIESY------TTSHGVHDFRSYSTSYASSMPQVQMDNREMKFXXXXXX 516
           FRSKSCGD +MQ+ESY       TS G+ D R YS SYA   PQ QM N           
Sbjct: 4   FRSKSCGDGRMQMESYHGGGGGPTSTGMQDLRCYSASYAYP-PQAQMGNDPKFKKGKSTN 62

Query: 517 XXXXXNWSFNDPEIQRKKRVASYKVYAVEGKMK 615
                 WSF+DPE+QRKKRVASYKVYAVEGKMK
Sbjct: 63  GSLSKAWSFSDPELQRKKRVASYKVYAVEGKMK 95



 Score = 23.5 bits (49), Expect(2) = 5e-18
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 272 MEDFRSKSC 298
           MEDFRSKSC
Sbjct: 1   MEDFRSKSC 9


>ref|XP_002281323.1| PREDICTED: uncharacterized protein LOC100266443 [Vitis vinifera]
          Length = 116

 Score = 93.2 bits (230), Expect(2) = 5e-18
 Identities = 53/93 (56%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
 Frame = +1

Query: 355 FRSKSCGDDKMQIESY------TTSHGVHDFRSYSTSYASSMPQVQMDNREMKFXXXXXX 516
           FRSKSCGD +MQ+ESY       TS G+ D R YS SYA   PQ QM N           
Sbjct: 4   FRSKSCGDGRMQMESYHGGGGGPTSTGMQDLRCYSASYAYP-PQAQMGNDPKFKKGKSTN 62

Query: 517 XXXXXNWSFNDPEIQRKKRVASYKVYAVEGKMK 615
                 WSF+DPE+QRKKRVASYKVYAVEGKMK
Sbjct: 63  GSLSKAWSFSDPELQRKKRVASYKVYAVEGKMK 95



 Score = 23.5 bits (49), Expect(2) = 5e-18
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 272 MEDFRSKSC 298
           MEDFRSKSC
Sbjct: 1   MEDFRSKSC 9


>ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267009 [Vitis vinifera]
          Length = 117

 Score = 94.0 bits (232), Expect(2) = 6e-18
 Identities = 52/92 (56%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
 Frame = +1

Query: 355 FRSKSCGDDKMQIESY----TTSHGVHDFRSYSTSYASS-MPQVQMDNREMKFXXXXXXX 519
           +RSKSC + +MQIESY        G+HD RSYS SYASS  P  QM              
Sbjct: 4   YRSKSCREGRMQIESYYGGRPAPSGMHDLRSYSVSYASSSQPPTQMGKEVKIKKGKSSFG 63

Query: 520 XXXXNWSFNDPEIQRKKRVASYKVYAVEGKMK 615
               +WSFNDPE+QRKKRVASYKVYAVEGKMK
Sbjct: 64  PSSKSWSFNDPELQRKKRVASYKVYAVEGKMK 95



 Score = 22.3 bits (46), Expect(2) = 6e-18
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 272 MEDFRSKSC 298
           MED+RSKSC
Sbjct: 1   MEDYRSKSC 9


>ref|XP_002514131.1| conserved hypothetical protein [Ricinus communis]
           gi|223546587|gb|EEF48085.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 89.7 bits (221), Expect(2) = 2e-16
 Identities = 53/99 (53%), Positives = 63/99 (63%), Gaps = 12/99 (12%)
 Frame = +1

Query: 355 FRSKSCGDDKMQIESY------TTSHGVH---DFRSYSTSYASSM--PQVQMDNREMKFX 501
           FRS SC D +MQI+SY       +S GV+   D R YS SYASS+   Q QM N ++KF 
Sbjct: 4   FRSNSCNDGRMQIQSYHGPSSLRSSSGVNSMQDLRCYSASYASSVHPTQTQMGNNDVKFK 63

Query: 502 XXXXXXXXXX-NWSFNDPEIQRKKRVASYKVYAVEGKMK 615
                      +WSFNDPE+QRKKRVASYKVY VEGK+K
Sbjct: 64  KGKSTNGSVSKSWSFNDPELQRKKRVASYKVYTVEGKVK 102



 Score = 21.6 bits (44), Expect(2) = 2e-16
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 272 MEDFRSKSC 298
           MEDFRS SC
Sbjct: 1   MEDFRSNSC 9


>ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209615 [Cucumis sativus]
           gi|449480704|ref|XP_004155972.1| PREDICTED:
           uncharacterized LOC101209615 [Cucumis sativus]
          Length = 116

 Score = 87.0 bits (214), Expect(2) = 3e-16
 Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
 Frame = +1

Query: 355 FRSKSCGDDKMQIESYTTSH----GVHDFRSYSTSYASSMPQVQMDNREMKFXXXXXXXX 522
           FRSKSC +++MQIE Y  +      + D RSYS SYASS+ Q Q  N+E+K         
Sbjct: 4   FRSKSCREERMQIERYNENRIAPTNMQDLRSYSVSYASSVQQNQ-SNKEVKMKKGKSNMG 62

Query: 523 XXX-NWSFNDPEIQRKKRVASYKVYAVEGKMK 615
               +WSF DPE+QRK RVA YKVYAVEGKMK
Sbjct: 63  STSKSWSFKDPELQRKTRVAGYKVYAVEGKMK 94



 Score = 23.5 bits (49), Expect(2) = 3e-16
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 272 MEDFRSKSC 298
           MEDFRSKSC
Sbjct: 1   MEDFRSKSC 9


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