BLASTX nr result

ID: Coptis24_contig00004540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004540
         (2209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265...   433   e-164
emb|CBI26658.3| unnamed protein product [Vitis vinifera]              433   e-164
ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|2...   424   e-154
ref|XP_002529914.1| conserved hypothetical protein [Ricinus comm...   401   e-151
ref|XP_004149589.1| PREDICTED: uncharacterized protein LOC101202...   397   e-150

>ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265786 [Vitis vinifera]
          Length = 694

 Score =  433 bits (1114), Expect(2) = e-164
 Identities = 226/365 (61%), Positives = 270/365 (73%), Gaps = 33/365 (9%)
 Frame = -2

Query: 1650 SDSLQSIMREAGPCTEAAVVSPG---SSSALYARVSTGDLVLRLGAHQPSGNLTMLETGE 1480
            ++SL S++REAG   E   VS G     S LYAR+STG+LVLRLGA +PS NL MLETGE
Sbjct: 331  TESLDSVIREAGSNIEEPFVSKGLVDEKSILYARISTGELVLRLGAGRPSDNLMMLETGE 390

Query: 1479 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGCILEDFVRW 1300
            P+Y PVTQEGP+LTEDLIKE EEFVLRTGS GAGCSQLLSDMQAFKAANPG ILEDFVRW
Sbjct: 391  PIYVPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGSILEDFVRW 450

Query: 1299 HSPPDWSRSDPKDEAQDSCNLQDSTSNIGQLSSRMQKEGNLWRELWETAKPLAAADQTPL 1120
            HSPPDW+ ++P DE +D+ +  DS S  GQLSSRM+KEGNLW ELW+TAKPL A  Q PL
Sbjct: 451  HSPPDWTDTEPSDEFKDTFDGGDSLSARGQLSSRMRKEGNLWCELWKTAKPLPAVKQAPL 510

Query: 1119 FDEDMAVEGVMNFLEEITPFELFQQCFVSLLGSGFVIAEGMLSPNSDLSKLFYECKDYII 940
            FDED+AVEG+++FL++I P ELF+Q FVSLLG GFVIAE  LS NS+LSKLF+ECKDY I
Sbjct: 511  FDEDLAVEGILHFLDDIPPSELFKQLFVSLLGLGFVIAEATLSTNSNLSKLFHECKDYTI 570

Query: 939  GACHGGSWSDNIDDLCQVYETIETIVVYPEDCLKIINQSEETTA-IEEPKRRFKKLSLNF 763
              C  G+W D IDDLCQVYET+E ++++PE+ LKI+ Q EE  A  +EPKRRF++L+  F
Sbjct: 571  ATCQRGTWIDKIDDLCQVYETVEMMLLHPEEILKIMKQPEEAAANADEPKRRFRRLAQIF 630

Query: 762  GVKDRQFLRKPA-------------------------IFSRKPPKPTSTASG----LDQN 670
            G KDR   RKPA                         +FS+KPPKP ST +     L++N
Sbjct: 631  GGKDRP-ARKPASKDQNVSEENPIRQPFSNMFDGRSSLFSKKPPKPDSTITADKPPLEEN 689

Query: 669  DWTVV 655
            DWT+V
Sbjct: 690  DWTIV 694



 Score =  173 bits (438), Expect(2) = e-164
 Identities = 97/158 (61%), Positives = 113/158 (71%), Gaps = 4/158 (2%)
 Frame = -1

Query: 2209 SRSSSPVRERAGLSFSAMKSLVLRESQHLTFVMMTSSCC*TSLYLILIFAEGPFPRRKNV 2030
            SR SSPVRERAGLS SA+KSLVLRE +  +           SL  +L+ AEG F RRK  
Sbjct: 175  SRDSSPVRERAGLSLSAVKSLVLREEKPTSEFGDNEKVL--SLIHLLLDAEGDFLRRKFG 232

Query: 2029 SGS----VMTSLPREIGGAPPDSFVVRLSEIIGSLKTLRKMALFWCRVVTELRRLWSDGQ 1862
            S +       SLPREI  APP+S VV+LSE+IG+ KTLRKMA+FWC VV ELR+LWS+ Q
Sbjct: 233  SDAETLATKMSLPREIHAAPPESLVVKLSEVIGNFKTLRKMAIFWCGVVAELRKLWSEEQ 292

Query: 1861 PVPHVPLDESPDLNTCLLHQQLQVINCCISRKTRRSMA 1748
             VP +PLDE PDLN CLL+QQLQVINCCISRK R  +A
Sbjct: 293  YVPGIPLDEIPDLNCCLLYQQLQVINCCISRKRRHVIA 330


>emb|CBI26658.3| unnamed protein product [Vitis vinifera]
          Length = 692

 Score =  433 bits (1114), Expect(2) = e-164
 Identities = 226/365 (61%), Positives = 270/365 (73%), Gaps = 33/365 (9%)
 Frame = -2

Query: 1650 SDSLQSIMREAGPCTEAAVVSPG---SSSALYARVSTGDLVLRLGAHQPSGNLTMLETGE 1480
            ++SL S++REAG   E   VS G     S LYAR+STG+LVLRLGA +PS NL MLETGE
Sbjct: 329  TESLDSVIREAGSNIEEPFVSKGLVDEKSILYARISTGELVLRLGAGRPSDNLMMLETGE 388

Query: 1479 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGCILEDFVRW 1300
            P+Y PVTQEGP+LTEDLIKE EEFVLRTGS GAGCSQLLSDMQAFKAANPG ILEDFVRW
Sbjct: 389  PIYVPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGSILEDFVRW 448

Query: 1299 HSPPDWSRSDPKDEAQDSCNLQDSTSNIGQLSSRMQKEGNLWRELWETAKPLAAADQTPL 1120
            HSPPDW+ ++P DE +D+ +  DS S  GQLSSRM+KEGNLW ELW+TAKPL A  Q PL
Sbjct: 449  HSPPDWTDTEPSDEFKDTFDGGDSLSARGQLSSRMRKEGNLWCELWKTAKPLPAVKQAPL 508

Query: 1119 FDEDMAVEGVMNFLEEITPFELFQQCFVSLLGSGFVIAEGMLSPNSDLSKLFYECKDYII 940
            FDED+AVEG+++FL++I P ELF+Q FVSLLG GFVIAE  LS NS+LSKLF+ECKDY I
Sbjct: 509  FDEDLAVEGILHFLDDIPPSELFKQLFVSLLGLGFVIAEATLSTNSNLSKLFHECKDYTI 568

Query: 939  GACHGGSWSDNIDDLCQVYETIETIVVYPEDCLKIINQSEETTA-IEEPKRRFKKLSLNF 763
              C  G+W D IDDLCQVYET+E ++++PE+ LKI+ Q EE  A  +EPKRRF++L+  F
Sbjct: 569  ATCQRGTWIDKIDDLCQVYETVEMMLLHPEEILKIMKQPEEAAANADEPKRRFRRLAQIF 628

Query: 762  GVKDRQFLRKPA-------------------------IFSRKPPKPTSTASG----LDQN 670
            G KDR   RKPA                         +FS+KPPKP ST +     L++N
Sbjct: 629  GGKDRP-ARKPASKDQNVSEENPIRQPFSNMFDGRSSLFSKKPPKPDSTITADKPPLEEN 687

Query: 669  DWTVV 655
            DWT+V
Sbjct: 688  DWTIV 692



 Score =  173 bits (438), Expect(2) = e-164
 Identities = 97/158 (61%), Positives = 113/158 (71%), Gaps = 4/158 (2%)
 Frame = -1

Query: 2209 SRSSSPVRERAGLSFSAMKSLVLRESQHLTFVMMTSSCC*TSLYLILIFAEGPFPRRKNV 2030
            SR SSPVRERAGLS SA+KSLVLRE +  +           SL  +L+ AEG F RRK  
Sbjct: 173  SRDSSPVRERAGLSLSAVKSLVLREEKPTSEFGDNEKVL--SLIHLLLDAEGDFLRRKFG 230

Query: 2029 SGS----VMTSLPREIGGAPPDSFVVRLSEIIGSLKTLRKMALFWCRVVTELRRLWSDGQ 1862
            S +       SLPREI  APP+S VV+LSE+IG+ KTLRKMA+FWC VV ELR+LWS+ Q
Sbjct: 231  SDAETLATKMSLPREIHAAPPESLVVKLSEVIGNFKTLRKMAIFWCGVVAELRKLWSEEQ 290

Query: 1861 PVPHVPLDESPDLNTCLLHQQLQVINCCISRKTRRSMA 1748
             VP +PLDE PDLN CLL+QQLQVINCCISRK R  +A
Sbjct: 291  YVPGIPLDEIPDLNCCLLYQQLQVINCCISRKRRHVIA 328


>ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|222860403|gb|EEE97950.1|
            predicted protein [Populus trichocarpa]
          Length = 526

 Score =  424 bits (1091), Expect(2) = e-154
 Identities = 209/343 (60%), Positives = 256/343 (74%), Gaps = 26/343 (7%)
 Frame = -2

Query: 1650 SDSLQSIMREAGPCTEAAVVSPGSSSA---LYARVSTGDLVLRLGAHQPSGNLTMLETGE 1480
            + S++S+MR AG C+E +    G+ ++   LYAR+STG+LVLRLGA +P+ NLTMLETGE
Sbjct: 184  TQSIESVMRHAGSCSEESADLQGTVTSHHILYARISTGELVLRLGADRPADNLTMLETGE 243

Query: 1479 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGCILEDFVRW 1300
            PVY+P+TQEGP+LTEDLIKE EEFVLRTGS GAGCSQLLSDMQAFKAANPGCILEDFVRW
Sbjct: 244  PVYSPITQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRW 303

Query: 1299 HSPPDWSRSDPKDEAQDSCNLQDSTSNIGQLSSRMQKEGNLWRELWETAKPLAAADQTPL 1120
            HSPPDW+  +P DEAQ+  +  DS+S  GQLSSRMQKEGNLWRELWETAKP+ A  Q PL
Sbjct: 304  HSPPDWTEGEPSDEAQEYVDQVDSSSTRGQLSSRMQKEGNLWRELWETAKPVPAVKQAPL 363

Query: 1119 FDEDMAVEGVMNFLEEITPFELFQQCFVSLLGSGFVIAEGMLSPNSDLSKLFYECKDYII 940
            FD D+AVEG++N LE+I P ELF+Q F+SLLG GFV+AE  LS N+DL K+F ECKDY++
Sbjct: 364  FDVDLAVEGILNDLEDIPPVELFEQLFISLLGLGFVMAEAKLSCNNDLLKIFLECKDYVV 423

Query: 939  GACHGGSWSDNIDDLCQVYETIETIVVYPEDCLKIINQSEETTAIEEPKRRFKKLSLNFG 760
              C G  WSD +DDLCQVYET+ET+++ PE+ LK   Q EET  + EP+RR K L L+FG
Sbjct: 424  VTCQGKIWSDKMDDLCQVYETVETMLLNPEEVLKAARQMEETNTVGEPRRRLKMLGLSFG 483

Query: 759  VKDRQ-----------------------FLRKPAIFSRKPPKP 700
             K+R                        F  K ++F +KPP+P
Sbjct: 484  SKERNSRNPSKDEKNSEENSSRQPFSTFFDGKSSLFLKKPPRP 526



 Score =  149 bits (375), Expect(2) = e-154
 Identities = 79/154 (51%), Positives = 103/154 (66%)
 Frame = -1

Query: 2209 SRSSSPVRERAGLSFSAMKSLVLRESQHLTFVMMTSSCC*TSLYLILIFAEGPFPRRKNV 2030
            S +SSP+ ERA LS +A+KSL+LR+ +        +     SL   L  AEG F  R   
Sbjct: 30   SGASSPIMERASLSLAAVKSLMLRDKEDKLTSEFGNDEKLESLIKSLFDAEGNFLSRNMS 89

Query: 2029 SGSVMTSLPREIGGAPPDSFVVRLSEIIGSLKTLRKMALFWCRVVTELRRLWSDGQPVPH 1850
                   LPR+I GAPP+ F+ +LSE+IGS  TLRKMALFWC++VTE+RRLWS+   +P 
Sbjct: 90   LVLEPPLLPRDIHGAPPEGFLTKLSEVIGSFTTLRKMALFWCKIVTEIRRLWSEELYIPG 149

Query: 1849 VPLDESPDLNTCLLHQQLQVINCCISRKTRRSMA 1748
            +PLDE PDLN+C L+QQLQV+N C+SRK  R +A
Sbjct: 150  IPLDEIPDLNSCRLYQQLQVVNSCVSRKKWRILA 183


>ref|XP_002529914.1| conserved hypothetical protein [Ricinus communis]
            gi|223530591|gb|EEF32468.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 690

 Score =  401 bits (1031), Expect(2) = e-151
 Identities = 208/363 (57%), Positives = 258/363 (71%), Gaps = 31/363 (8%)
 Frame = -2

Query: 1650 SDSLQSIMREAGPCTEAAVVSP---GSSSALYARVSTGDLVLRLGAHQPSGNLTMLETGE 1480
            ++SL+S+MR+A   ++   +S     SS  LYAR+  G+LVLRLGA   + NLTML TGE
Sbjct: 335  TESLESVMRDASSVSKEPAISKENVSSSGILYARLCNGELVLRLGADHQADNLTMLGTGE 394

Query: 1479 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGCILEDFVRW 1300
            P+Y+P+TQEGP+LTEDLIKE EEFVLRTGS GAGCSQLLSDMQAFKAANPGCILEDFVRW
Sbjct: 395  PIYSPITQEGPLLTEDLIKENEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRW 454

Query: 1299 HSPPDWSRSDPKDEAQDSCNLQDSTSNIGQLSSRMQKEGNLWRELWETAKPLAAADQTPL 1120
            HSPPDW+ S   +E  D     DS+S  GQLSSRMQKEGNLWRELWET+K + A  Q PL
Sbjct: 455  HSPPDWTESGEVNEFFDG---SDSSSTRGQLSSRMQKEGNLWRELWETSKAVPAVKQAPL 511

Query: 1119 FDEDMAVEGVMNFLEEITPFELFQQCFVSLLGSGFVIAEGMLSPNSDLSKLFYECKDYII 940
            +DED+AVEG+++ LE++ P ELF+Q F+SLLG GFV+AE  LS +SD SKLF ECKDYI+
Sbjct: 512  YDEDLAVEGILHDLEDLPPSELFEQLFISLLGLGFVMAEAKLSGSSDASKLFSECKDYIV 571

Query: 939  GACHGGSWSDNIDDLCQVYETIETIVVYPEDCLKIINQSEETTAIEEPKRRFKKLSLNFG 760
              C G SWS+ +DD+CQVYET+E I++ PE+   ++   E TT   EP+R FKKL LNFG
Sbjct: 572  LTCQGNSWSEKVDDICQVYETVEKILLNPEE---VLRAEETTTTAGEPRRLFKKLGLNFG 628

Query: 759  VKDRQFLRKP-----------------------AIFSRKPPKPTSTASG-----LDQNDW 664
             KDR  LRKP                       ++FS+KPP+P + + G      D N+W
Sbjct: 629  SKDRN-LRKPSSRDDNSEMSPGQPFSNFFDGKSSLFSKKPPRPETPSLGDKTSCPDDNEW 687

Query: 663  TVV 655
            T+V
Sbjct: 688  TLV 690



 Score =  161 bits (407), Expect(2) = e-151
 Identities = 86/155 (55%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
 Frame = -1

Query: 2209 SRSSSPVRERAGLSFSAMKSLVLRESQH-LTFVMMTSSCC*TSLYLILIFAEGPFPRRKN 2033
            S SSSP+ ERA LS +AMKSLVLR+ +  L            SL   L  AEG F RR  
Sbjct: 180  SGSSSPILERASLSLAAMKSLVLRDKEDKLASEFGGDDEKVLSLIHSLFDAEGKFLRRNI 239

Query: 2032 VSGSVMTSLPREIGGAPPDSFVVRLSEIIGSLKTLRKMALFWCRVVTELRRLWSDGQPVP 1853
              G   +SLPR+I G+PP+S +V++SE+IGS KTLRKMAL WC++V ELRRLWS+   +P
Sbjct: 240  NYGLEASSLPRDIHGSPPESLLVKISEVIGSFKTLRKMALLWCKIVAELRRLWSEELHIP 299

Query: 1852 HVPLDESPDLNTCLLHQQLQVINCCISRKTRRSMA 1748
             +PLD+ PDLN+CLL+QQ QVINCC+SRK R  +A
Sbjct: 300  GIPLDDLPDLNSCLLYQQFQVINCCVSRKQRHILA 334


>ref|XP_004149589.1| PREDICTED: uncharacterized protein LOC101202869 [Cucumis sativus]
          Length = 686

 Score =  397 bits (1019), Expect(2) = e-150
 Identities = 206/360 (57%), Positives = 255/360 (70%), Gaps = 28/360 (7%)
 Frame = -2

Query: 1650 SDSLQSIMREAGPCTEAA---VVSPGSSSALYARVSTGDLVLRLGAHQPSGNLTMLETGE 1480
            +DS+ + +REA    E+    V  PG++  LYAR++ G+L LRLGA  P GN  MLETGE
Sbjct: 331  TDSIDAALREASSNAESKTSEVTIPGNT-LLYARLNNGELALRLGADCPFGNHKMLETGE 389

Query: 1479 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGCILEDFVRW 1300
             VY+PVTQEGP+LTED+IKE EEFVLRTGS GAGCSQLLSDMQAFKAANPGCILEDFVRW
Sbjct: 390  AVYSPVTQEGPLLTEDVIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRW 449

Query: 1299 HSPPDWSRSDPKDEAQDSCNLQDSTSNIGQLSSRMQKEGNLWRELWETAKPLAAADQTPL 1120
            HSPPDW+  +P +++ DS    DS    GQLSSRMQKEGNLW ELWET+KP+ A  QTPL
Sbjct: 450  HSPPDWTEPEPSNDSIDSPVGSDSR---GQLSSRMQKEGNLWLELWETSKPVPAVKQTPL 506

Query: 1119 FDEDMAVEGVMNFLEEITPFELFQQCFVSLLGSGFVIAEGMLSPNSDLSKLFYECKDYII 940
            FDED+ VEG++N LE++ P ELFQ  F+SLLG GF++AE  L+ N++LSKLFY+CK Y++
Sbjct: 507  FDEDLVVEGILNDLEDLPPSELFQPLFISLLGLGFIVAEAKLANNNNLSKLFYDCKGYVV 566

Query: 939  GACHGGSWSDNIDDLCQVYETIETIVVYPEDCLKIINQSEETT-AIEEPKRRFKKLSLNF 763
              C   SWS+ +DDLCQVYET+ET++V PE+ LK I Q EE+     E KRRFKKLSLNF
Sbjct: 567  ATCQNSSWSNKVDDLCQVYETVETMMVNPEEILKAIKQPEESNMTASELKRRFKKLSLNF 626

Query: 762  GVKDRQ------------------------FLRKPAIFSRKPPKPTSTASGLDQNDWTVV 655
              KD Q                        F  K ++F++KPPKP + ++   +N WT V
Sbjct: 627  VGKDGQSRKSSPRNANSDESPSSTQPFSSFFDSKSSLFAKKPPKPETPSATPVENGWTFV 686



 Score =  164 bits (416), Expect(2) = e-150
 Identities = 83/157 (52%), Positives = 112/157 (71%), Gaps = 3/157 (1%)
 Frame = -1

Query: 2209 SRSSSPVRERAGLSFSAMKSLVLRESQHLTFVMMTSSCC*TSLYLILIFAEGPFPRR--- 2039
            S  SSP RE++GLS S++++L+LRE +  +           SL   L  AEG F RR   
Sbjct: 174  SGDSSPAREKSGLSLSSVRALMLREREEKSSTEFRHDERIQSLICSLFDAEGVFLRRYFD 233

Query: 2038 KNVSGSVMTSLPREIGGAPPDSFVVRLSEIIGSLKTLRKMALFWCRVVTELRRLWSDGQP 1859
                G+ +TSLP++I GAPPDS +V++SE+IGS +TLRKMALFWCR+V E+RR WS+ Q 
Sbjct: 234  TASEGTFVTSLPKDIHGAPPDSLLVKISEVIGSFRTLRKMALFWCRIVDEMRRFWSEEQY 293

Query: 1858 VPHVPLDESPDLNTCLLHQQLQVINCCISRKTRRSMA 1748
            +P +P+DE PDLN+CLL+Q+LQVINCC+SRK R  +A
Sbjct: 294  LPGIPIDEIPDLNSCLLYQRLQVINCCVSRKRRHEIA 330


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