BLASTX nr result

ID: Coptis24_contig00004539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004539
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   124   8e-27
ref|XP_002282552.2| PREDICTED: UPF0481 protein At3g47200-like [V...   118   6e-25
emb|CBI21015.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002282530.2| PREDICTED: UPF0481 protein At3g47200-like [V...   117   1e-24
emb|CBI21014.3| unnamed protein product [Vitis vinifera]              117   1e-24

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  124 bits (312), Expect = 8e-27
 Identities = 62/135 (45%), Positives = 87/135 (64%)
 Frame = +3

Query: 156 QEHSDSDDYLATTIDDMIQNPPPFQSNCCIYKVPQRLRSVNEEAYTPEVVSIGPLHYGKA 335
           + + ++D  LA +I++ + +     S CCIY+VP  LR VNEEA+ P ++SIGP+H+GK 
Sbjct: 15  EANGNADSLLAASINEKLSSLTSLPSQCCIYRVPDTLRRVNEEAFVPRILSIGPVHHGKK 74

Query: 336 KLQPMEAQKQRYLKSFLSRNRNIKLKDCVKHLRTLETEARTYYNELQFSRNFESDEFVQM 515
           +L+ ME  K +YLK+ L R     ++  VK +R LE   R  Y E+     F+SDEFV M
Sbjct: 75  RLRDMEGHKWQYLKALLQRKPGTMVERYVKAMRELEARTRGCYAEI---IKFDSDEFVTM 131

Query: 516 MLLDGCFIFEVFLIN 560
           MLLDGCFI E+FL N
Sbjct: 132 MLLDGCFIIELFLKN 146


>ref|XP_002282552.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 440

 Score =  118 bits (296), Expect = 6e-25
 Identities = 62/128 (48%), Positives = 82/128 (64%)
 Frame = +3

Query: 171 SDDYLATTIDDMIQNPPPFQSNCCIYKVPQRLRSVNEEAYTPEVVSIGPLHYGKAKLQPM 350
           S   +AT++  M++   P  + CCIY+VPQ+LR  N EAYTP VVSIGPLH+G+  L  M
Sbjct: 5   SSKEVATSLQGMLEKLTPLSTTCCIYRVPQKLRKANMEAYTPRVVSIGPLHHGEEHLVAM 64

Query: 351 EAQKQRYLKSFLSRNRNIKLKDCVKHLRTLETEARTYYNELQFSRNFESDEFVQMMLLDG 530
           E  K RYL+ FLS  R   L++CV+ +   E +AR YY E   S     +EFV+M+L+D 
Sbjct: 65  EEHKLRYLQKFLSETRK-TLEECVEIIYREEEKARGYYME---SIKMSREEFVKMILVDA 120

Query: 531 CFIFEVFL 554
           CFI EV L
Sbjct: 121 CFIIEVIL 128


>emb|CBI21015.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  118 bits (296), Expect = 6e-25
 Identities = 62/128 (48%), Positives = 82/128 (64%)
 Frame = +3

Query: 171 SDDYLATTIDDMIQNPPPFQSNCCIYKVPQRLRSVNEEAYTPEVVSIGPLHYGKAKLQPM 350
           S   +AT++  M++   P  + CCIY+VPQ+LR  N EAYTP VVSIGPLH+G+  L  M
Sbjct: 5   SSKEVATSLQGMLEKLTPLSTTCCIYRVPQKLRKANMEAYTPRVVSIGPLHHGEEHLVAM 64

Query: 351 EAQKQRYLKSFLSRNRNIKLKDCVKHLRTLETEARTYYNELQFSRNFESDEFVQMMLLDG 530
           E  K RYL+ FLS  R   L++CV+ +   E +AR YY E   S     +EFV+M+L+D 
Sbjct: 65  EEHKLRYLQKFLSETRK-TLEECVEIIYREEEKARGYYME---SIKMSREEFVKMILVDA 120

Query: 531 CFIFEVFL 554
           CFI EV L
Sbjct: 121 CFIIEVIL 128


>ref|XP_002282530.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 467

 Score =  117 bits (294), Expect = 1e-24
 Identities = 67/142 (47%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +3

Query: 144 AGTNQEHSD-----SDDYLATTIDDMIQNPPPFQSNCCIYKVPQRLRSVNEEAYTPEVVS 308
           AG     SD     S   +AT++   +    P  + CCIY+VPQ+LR VN EAYTP VVS
Sbjct: 24  AGKEDHASDEMLKKSSKEVATSLQGRLDRLTPLSATCCIYRVPQKLRKVNMEAYTPRVVS 83

Query: 309 IGPLHYGKAKLQPMEAQKQRYLKSFLSRNRNIKLKDCVKHLRTLETEARTYYNELQFSRN 488
           IGPLH+G+  L  ME  K RYL++FL R R   L++CV+ +   E  AR  Y E     N
Sbjct: 84  IGPLHHGEEHLIAMEEHKLRYLQNFLHRTRK-TLEECVEIISREEKTARDCYME---PIN 139

Query: 489 FESDEFVQMMLLDGCFIFEVFL 554
             S EFV+M+L+DGCFI EV L
Sbjct: 140 MSSKEFVEMILVDGCFIIEVIL 161


>emb|CBI21014.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/128 (49%), Positives = 81/128 (63%)
 Frame = +3

Query: 171 SDDYLATTIDDMIQNPPPFQSNCCIYKVPQRLRSVNEEAYTPEVVSIGPLHYGKAKLQPM 350
           S   +AT++   +    P  + CCIY+VPQ+LR VN EAYTP VVSIGPLH+G+  L  M
Sbjct: 5   SSKEVATSLQGRLDRLTPLSATCCIYRVPQKLRKVNMEAYTPRVVSIGPLHHGEEHLIAM 64

Query: 351 EAQKQRYLKSFLSRNRNIKLKDCVKHLRTLETEARTYYNELQFSRNFESDEFVQMMLLDG 530
           E  K RYL++FL R R   L++CV+ +   E  AR  Y E     N  S EFV+M+L+DG
Sbjct: 65  EEHKLRYLQNFLHRTRK-TLEECVEIISREEKTARDCYME---PINMSSKEFVEMILVDG 120

Query: 531 CFIFEVFL 554
           CFI EV L
Sbjct: 121 CFIIEVIL 128


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