BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004536
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic...   403   e-110
ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic...   400   e-109
emb|CBI28108.3| unnamed protein product [Vitis vinifera]              400   e-109
gb|ACG40873.1| nudix hydrolase 24 [Zea mays]                          391   e-106
ref|NP_001137097.1| uncharacterized protein LOC100217273 [Zea ma...   388   e-105

>ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic [Vitis vinifera]
            gi|297738865|emb|CBI28110.3| unnamed protein product
            [Vitis vinifera]
          Length = 364

 Score =  403 bits (1036), Expect = e-110
 Identities = 198/348 (56%), Positives = 256/348 (73%), Gaps = 5/348 (1%)
 Frame = -1

Query: 1395 PLSFSRHSMTLNTVSSPP----SLAVSTTSFTWDDVLGVCQSSNGGLNGVLTDTSPSYLQ 1228
            PL  +R +++  T++S P    S +VS T FTWDDV+ +  S     +        S LQ
Sbjct: 24   PLLPTRLTLSSRTLASTPIRVGSPSVSATCFTWDDVVRISDSQYSSRHS-------SDLQ 76

Query: 1227 GFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAE-HLRKFKDVFTFVEDGVYVTLH 1051
            GF ++IR CNR  EK+SDF PF +E Q VGYIHK F + HL++F +VF F +D  ++ LH
Sbjct: 77   GFFEKIRVCNRGLEKQSDFLPFVIEDQTVGYIHKGFFDDHLKRFSNVFIFTQDNSHIMLH 136

Query: 1050 ASLGSPDDRTFAVGYVIERLLGNGLIPGIRNEAYPVTSSYGMPICFSLERAAAPFFGVKT 871
              L +P++RT AVG V+ + LG  LIPGIR E YPV SS+G P+ F LERAAAP+FG+K+
Sbjct: 137  PVLRTPNERTRAVGDVV-KCLGEELIPGIRKELYPVASSFGAPVFFLLERAAAPYFGIKS 195

Query: 870  YGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAG 691
            YGV ++GY ER+G+K++W+GKRS VKPT+ G LDH+ AGG+PH ++C  N MKECEEEAG
Sbjct: 196  YGVHMNGYTERNGQKYLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACKENVMKECEEEAG 255

Query: 690  IPRSISKAAIPVGAISFLDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIPVKH 511
            IPRS+SK A+PVGA+S+ DID YRYKR+VLFCYDLKL D F+P NQDGEVESF+LIPV  
Sbjct: 256  IPRSMSKEAVPVGAVSYGDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIPVSQ 315

Query: 510  VAKIIQSTDFFRPTASVAITDFLFRHGFIRPDQRGYLELLESLKSGDC 367
            VA +++ T FF+   S+ I DFLFRHG+I PD  GYLELL+SL+ GDC
Sbjct: 316  VADVVRRTHFFKANCSLVIIDFLFRHGYIGPDSLGYLELLQSLRRGDC 363


>ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic-like isoform 1 [Vitis
            vinifera]
          Length = 364

 Score =  400 bits (1029), Expect = e-109
 Identities = 196/349 (56%), Positives = 256/349 (73%), Gaps = 5/349 (1%)
 Frame = -1

Query: 1395 PLSFSRHSMTLNTVSSPP----SLAVSTTSFTWDDVLGVCQSSNGGLNGVLTDTSPSYLQ 1228
            PL  +R +++  T++S P    S +VS T FTWDDV+ +  S +   +        S LQ
Sbjct: 24   PLLPTRLTLSSRTLASTPIRVSSPSVSATCFTWDDVVRISDSQDSSRHS-------SDLQ 76

Query: 1227 GFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAE-HLRKFKDVFTFVEDGVYVTLH 1051
            GF ++IR CNR  EK+SDF PF +E Q VGYIHK F + HL++F +VF F +D  ++ LH
Sbjct: 77   GFFEKIRVCNRGLEKQSDFLPFVIEDQTVGYIHKGFFDDHLKRFSNVFIFTQDNSHIMLH 136

Query: 1050 ASLGSPDDRTFAVGYVIERLLGNGLIPGIRNEAYPVTSSYGMPICFSLERAAAPFFGVKT 871
              L +P++RT AVG V+ + LG  LIPGIR E YPV S +G P+ F LERAAAP+FG+K 
Sbjct: 137  PVLRTPNERTRAVGDVV-KCLGEELIPGIRKELYPVASLFGAPVFFLLERAAAPYFGIKA 195

Query: 870  YGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAG 691
            YG+ ++GY ER+G+K++W+GKRS VK T+ G LDH+ +GG+PH ++C  N MKECEEEAG
Sbjct: 196  YGIQMNGYTERNGQKYLWIGKRSQVKTTYPGMLDHLVSGGLPHGIACMENVMKECEEEAG 255

Query: 690  IPRSISKAAIPVGAISFLDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIPVKH 511
            IPRS+SK A+PVGA+S+ DID YRYKR+VLFCYDLKL D F+P NQDGEVESF+LIPV  
Sbjct: 256  IPRSMSKEAVPVGAVSYGDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIPVSQ 315

Query: 510  VAKIIQSTDFFRPTASVAITDFLFRHGFIRPDQRGYLELLESLKSGDCS 364
            VA +++ T FF+   S+ I DFLFRHG+I PD  GYLELL+SL+SGDCS
Sbjct: 316  VADVVRRTHFFKSNCSLVIIDFLFRHGYIGPDSLGYLELLQSLRSGDCS 364


>emb|CBI28108.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  400 bits (1029), Expect = e-109
 Identities = 196/349 (56%), Positives = 256/349 (73%), Gaps = 5/349 (1%)
 Frame = -1

Query: 1395 PLSFSRHSMTLNTVSSPP----SLAVSTTSFTWDDVLGVCQSSNGGLNGVLTDTSPSYLQ 1228
            PL  +R +++  T++S P    S +VS T FTWDDV+ +  S +   +        S LQ
Sbjct: 52   PLLPTRLTLSSRTLASTPIRVSSPSVSATCFTWDDVVRISDSQDSSRHS-------SDLQ 104

Query: 1227 GFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAE-HLRKFKDVFTFVEDGVYVTLH 1051
            GF ++IR CNR  EK+SDF PF +E Q VGYIHK F + HL++F +VF F +D  ++ LH
Sbjct: 105  GFFEKIRVCNRGLEKQSDFLPFVIEDQTVGYIHKGFFDDHLKRFSNVFIFTQDNSHIMLH 164

Query: 1050 ASLGSPDDRTFAVGYVIERLLGNGLIPGIRNEAYPVTSSYGMPICFSLERAAAPFFGVKT 871
              L +P++RT AVG V+ + LG  LIPGIR E YPV S +G P+ F LERAAAP+FG+K 
Sbjct: 165  PVLRTPNERTRAVGDVV-KCLGEELIPGIRKELYPVASLFGAPVFFLLERAAAPYFGIKA 223

Query: 870  YGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAG 691
            YG+ ++GY ER+G+K++W+GKRS VK T+ G LDH+ +GG+PH ++C  N MKECEEEAG
Sbjct: 224  YGIQMNGYTERNGQKYLWIGKRSQVKTTYPGMLDHLVSGGLPHGIACMENVMKECEEEAG 283

Query: 690  IPRSISKAAIPVGAISFLDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIPVKH 511
            IPRS+SK A+PVGA+S+ DID YRYKR+VLFCYDLKL D F+P NQDGEVESF+LIPV  
Sbjct: 284  IPRSMSKEAVPVGAVSYGDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIPVSQ 343

Query: 510  VAKIIQSTDFFRPTASVAITDFLFRHGFIRPDQRGYLELLESLKSGDCS 364
            VA +++ T FF+   S+ I DFLFRHG+I PD  GYLELL+SL+SGDCS
Sbjct: 344  VADVVRRTHFFKSNCSLVIIDFLFRHGYIGPDSLGYLELLQSLRSGDCS 392


>gb|ACG40873.1| nudix hydrolase 24 [Zea mays]
          Length = 353

 Score =  391 bits (1004), Expect = e-106
 Identities = 196/356 (55%), Positives = 252/356 (70%), Gaps = 6/356 (1%)
 Frame = -1

Query: 1413 FPQTKKPLSFSRHSMTLNTVSSPPSLAVSTTSFTWDDVLGVCQSSNGGLNGVLTDTSPSY 1234
            FP   + L+  R     ++ + P S+A     F+W D L V      G          S 
Sbjct: 12   FPARLQFLTSRRFCFPASSAAPPTSVA----GFSWADALRVAGDGGRG--------DESD 59

Query: 1233 LQGFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAEHLRKFKDVFTFVEDG----- 1069
            L G+ ++++SCNR  +KK  F  F VE Q+VGYIHK F EH+R F DVFT V D      
Sbjct: 60   LSGYFRKVKSCNRGMDKKGQFVEFSVEDQVVGYIHKGFIEHIRDFHDVFTIVMDDNGSNT 119

Query: 1068 -VYVTLHASLGSPDDRTFAVGYVIERLLGNGLIPGIRNEAYPVTSSYGMPICFSLERAAA 892
              +V+L +SL +P+DRT A+G VI+ L    LIPGIRNE YPVTSSYGMP+ FSLERAAA
Sbjct: 120  VEHVSLQSSLRTPEDRTHAIGSVIKSL--GELIPGIRNELYPVTSSYGMPVYFSLERAAA 177

Query: 891  PFFGVKTYGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMK 712
            P+FG+K YGV ++GYVE+DG+KF+W+GKRSDVK T+ G LDH+ AGG+P+ +SC  N +K
Sbjct: 178  PYFGIKAYGVHMNGYVEKDGQKFLWIGKRSDVKQTYPGMLDHLVAGGLPYGMSCKENIIK 237

Query: 711  ECEEEAGIPRSISKAAIPVGAISFLDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESF 532
            ECEEEAGI RSIS  A  VGA+S++DI+ +RYKR+VLFCYDL+L   FVP N+DGEV+SF
Sbjct: 238  ECEEEAGITRSISTNATSVGAVSYMDIEGFRYKRDVLFCYDLQLPADFVPNNEDGEVDSF 297

Query: 531  KLIPVKHVAKIIQSTDFFRPTASVAITDFLFRHGFIRPDQRGYLELLESLKSGDCS 364
            +L+PV H A II+ TDFF+P  ++ I DFLFRHG+I PD RGYL+LL+SL+SGDCS
Sbjct: 298  RLVPVIHAANIIRRTDFFKPNCNLVIIDFLFRHGYINPDSRGYLDLLQSLRSGDCS 353


>ref|NP_001137097.1| uncharacterized protein LOC100217273 [Zea mays]
            gi|194698354|gb|ACF83261.1| unknown [Zea mays]
            gi|414885014|tpg|DAA61028.1| TPA: nudix hydrolase 24 [Zea
            mays]
          Length = 353

 Score =  388 bits (996), Expect = e-105
 Identities = 195/356 (54%), Positives = 251/356 (70%), Gaps = 6/356 (1%)
 Frame = -1

Query: 1413 FPQTKKPLSFSRHSMTLNTVSSPPSLAVSTTSFTWDDVLGVCQSSNGGLNGVLTDTSPSY 1234
            FP   + L+  R     ++ + P S+A     F+W D L V      G          S 
Sbjct: 12   FPARLQLLTSRRFCFPASSAAPPSSVA----GFSWADALRVAGDGGRG--------DESD 59

Query: 1233 LQGFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAEHLRKFKDVFTFVEDG----- 1069
            L G+ ++++SCNR  +KK  F  F VE Q+VGYIHK F EH+R F DVFT V D      
Sbjct: 60   LSGYFRKVKSCNRGMDKKGQFVKFSVEDQVVGYIHKGFIEHIRDFHDVFTIVMDDNGSNT 119

Query: 1068 -VYVTLHASLGSPDDRTFAVGYVIERLLGNGLIPGIRNEAYPVTSSYGMPICFSLERAAA 892
              +V+L +SL +P+DRT A+G VI+ L    LIPGIRNE YPVTSSYGMP+ FSLERAAA
Sbjct: 120  VEHVSLQSSLRTPEDRTHAIGSVIKSL--GELIPGIRNELYPVTSSYGMPVYFSLERAAA 177

Query: 891  PFFGVKTYGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMK 712
            P+FG+K YGV ++GYVE+DG+KF+W+GKRSDVK T+ G LDH+ AGG+P+ +SC  N +K
Sbjct: 178  PYFGIKAYGVHMNGYVEKDGQKFLWIGKRSDVKQTYPGMLDHLVAGGLPYGMSCKENIIK 237

Query: 711  ECEEEAGIPRSISKAAIPVGAISFLDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESF 532
            ECEEEAGI RSIS  A  VGA+S++DI+ +RYKR+VLFCYDL+L   FVP N+DGEV+SF
Sbjct: 238  ECEEEAGITRSISTNATSVGAVSYMDIEGFRYKRDVLFCYDLQLPADFVPNNEDGEVDSF 297

Query: 531  KLIPVKHVAKIIQSTDFFRPTASVAITDFLFRHGFIRPDQRGYLELLESLKSGDCS 364
            +L+PV H A II+ TDFF+P  ++ I DFLFRHG+I PD R YL+LL+SL+SGDCS
Sbjct: 298  RLVPVIHAANIIRRTDFFKPNCNLVIIDFLFRHGYINPDSRCYLDLLQSLRSGDCS 353