BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004532
         (2713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284913.1| PREDICTED: 3-deoxy-manno-octulosonate cytidy...   432   e-118
ref|XP_002517281.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidy...   426   e-116
ref|XP_002316900.1| predicted protein [Populus trichocarpa] gi|2...   426   e-116
ref|XP_002894417.1| cytidylyltransferase family [Arabidopsis lyr...   423   e-115
ref|XP_003526068.1| PREDICTED: 3-deoxy-manno-octulosonate cytidy...   423   e-115

>ref|XP_002284913.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase [Vitis
            vinifera] gi|302143017|emb|CBI20312.3| unnamed protein
            product [Vitis vinifera]
          Length = 297

 Score =  432 bits (1111), Expect = e-118
 Identities = 218/282 (77%), Positives = 236/282 (83%), Gaps = 1/282 (0%)
 Frame = -1

Query: 1294 TKAWIVHGLLXXXXXXXXXXXA-YILHGRQTKFRTRVVGIIPARFASSRFQGKPLVHILG 1118
            TKAWI+HG+L             Y+L  R  KFR+RVVGIIPARFASSRFQGKPLV ILG
Sbjct: 16   TKAWIIHGILTGAAVAVALGAHAYLLLRRSGKFRSRVVGIIPARFASSRFQGKPLVQILG 75

Query: 1117 KPMIQRTWERAKLATTLDNVVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALLK 938
            KPMIQRTWERAKLATTLD+VVVATDD+KIA+CCRGFGADVIMTSESCRNGTERCNEAL K
Sbjct: 76   KPMIQRTWERAKLATTLDHVVVATDDDKIADCCRGFGADVIMTSESCRNGTERCNEALQK 135

Query: 937  LQKKYDIVVNIQGDEPLIEPEIIDGIVKSLQGAPDAVFSTAVTSLKPEDAHDPNRVKCVV 758
            L+K+YDIVVNIQGDEPLIEPEIIDG+VK+LQ APDAVFSTAVTSLKPED  DPNRVKC+V
Sbjct: 136  LEKQYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDGFDPNRVKCIV 195

Query: 757  DNYGYAIYFSRGLIPFNKSGKVNPNFPYLLHLGIQSYDTKFLRIYXXXXXXXXXXXXXXX 578
            DN GYAIYFSRGLIPFNKSG+VN  FPYLLHLGIQSYDTKFLRIY               
Sbjct: 196  DNRGYAIYFSRGLIPFNKSGEVNQQFPYLLHLGIQSYDTKFLRIYPDLPPTPLQLEEDLE 255

Query: 577  XXXXXENGYKMKVIKVNHDAHGVDTPEDVEKIESLMRQRNIS 452
                 ENGYKMKVIKV+H+AHGVDTPEDV+KIES MR+RN+S
Sbjct: 256  QLKVLENGYKMKVIKVDHEAHGVDTPEDVDKIESFMRERNLS 297


>ref|XP_002517281.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
            [Ricinus communis] gi|223543544|gb|EEF45074.1|
            cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase,
            putative [Ricinus communis]
          Length = 294

 Score =  426 bits (1095), Expect = e-116
 Identities = 214/294 (72%), Positives = 235/294 (79%)
 Frame = -1

Query: 1336 MTICXXXXXXXXXNTKAWIVHGLLXXXXXXXXXXXAYILHGRQTKFRTRVVGIIPARFAS 1157
            M+IC          +K+WIVH ++              L  R  KFR+RV+GIIPARFAS
Sbjct: 1    MSICSSNSSSSSSGSKSWIVHSIVAGAAIAVGIGARAYL-SRSRKFRSRVIGIIPARFAS 59

Query: 1156 SRFQGKPLVHILGKPMIQRTWERAKLATTLDNVVVATDDEKIAECCRGFGADVIMTSESC 977
            SRFQGKPLV ILGKPMIQRTWERAKLATTLD+++VATDDEKIAECCRGFGADVIMTSESC
Sbjct: 60   SRFQGKPLVQILGKPMIQRTWERAKLATTLDHIIVATDDEKIAECCRGFGADVIMTSESC 119

Query: 976  RNGTERCNEALLKLQKKYDIVVNIQGDEPLIEPEIIDGIVKSLQGAPDAVFSTAVTSLKP 797
            RNGTERCNEA+ KL+KKYD+VVNIQGDEPLIEPEIIDGIVK+LQ APDAVFSTAVTSLKP
Sbjct: 120  RNGTERCNEAIGKLEKKYDVVVNIQGDEPLIEPEIIDGIVKALQEAPDAVFSTAVTSLKP 179

Query: 796  EDAHDPNRVKCVVDNYGYAIYFSRGLIPFNKSGKVNPNFPYLLHLGIQSYDTKFLRIYXX 617
            EDA DPNRVKCVVDN GYAIYFSRGLIP+NKSGK+NP FPYLLHLGIQSYD KFL+IY  
Sbjct: 180  EDAFDPNRVKCVVDNQGYAIYFSRGLIPYNKSGKINPQFPYLLHLGIQSYDAKFLKIYPE 239

Query: 616  XXXXXXXXXXXXXXXXXXENGYKMKVIKVNHDAHGVDTPEDVEKIESLMRQRNI 455
                              ENGYKMKVIKV+H+AHGVD PEDVEKIE LMR+ N+
Sbjct: 240  LQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIERLMREHNV 293


>ref|XP_002316900.1| predicted protein [Populus trichocarpa] gi|222859965|gb|EEE97512.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  426 bits (1094), Expect = e-116
 Identities = 214/281 (76%), Positives = 235/281 (83%)
 Frame = -1

Query: 1294 TKAWIVHGLLXXXXXXXXXXXAYILHGRQTKFRTRVVGIIPARFASSRFQGKPLVHILGK 1115
            T++WIVHG++              L  R  KFR++VVGIIPAR+ASSRF+GKPLV+ILGK
Sbjct: 14   TRSWIVHGIVAGAAIAAAIGAGAYLV-RYRKFRSQVVGIIPARYASSRFEGKPLVNILGK 72

Query: 1114 PMIQRTWERAKLATTLDNVVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALLKL 935
            PMIQRTWERAKLATTLD++VVATDDEKIAECCRGFGADV+MTSESCRNGTERCNEAL KL
Sbjct: 73   PMIQRTWERAKLATTLDHIVVATDDEKIAECCRGFGADVVMTSESCRNGTERCNEALQKL 132

Query: 934  QKKYDIVVNIQGDEPLIEPEIIDGIVKSLQGAPDAVFSTAVTSLKPEDAHDPNRVKCVVD 755
             KKYD+VVNIQGDEPLIEPEIIDGIVKSLQ APDAVFSTAVTSLKPEDA DPNRVKCVVD
Sbjct: 133  DKKYDVVVNIQGDEPLIEPEIIDGIVKSLQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 192

Query: 754  NYGYAIYFSRGLIPFNKSGKVNPNFPYLLHLGIQSYDTKFLRIYXXXXXXXXXXXXXXXX 575
            N GYAIYFSRGLIP+NKSGKVNP FPYLLHLGIQSYD KFL+IY                
Sbjct: 193  NQGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQ 252

Query: 574  XXXXENGYKMKVIKVNHDAHGVDTPEDVEKIESLMRQRNIS 452
                ENGYKMKVIKV+H+AHGVD PEDVEKIE+LMR++N+S
Sbjct: 253  LKVLENGYKMKVIKVDHEAHGVDIPEDVEKIETLMREQNLS 293


>ref|XP_002894417.1| cytidylyltransferase family [Arabidopsis lyrata subsp. lyrata]
            gi|297340259|gb|EFH70676.1| cytidylyltransferase family
            [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score =  423 bits (1088), Expect = e-115
 Identities = 211/280 (75%), Positives = 235/280 (83%)
 Frame = -1

Query: 1291 KAWIVHGLLXXXXXXXXXXXAYILHGRQTKFRTRVVGIIPARFASSRFQGKPLVHILGKP 1112
            K WIVHG+L           +  L GR  KFR+RVVGIIPAR+ASSRF+GKPLV ILGKP
Sbjct: 15   KTWIVHGILAGAAIAAAIGASAYL-GRSRKFRSRVVGIIPARYASSRFEGKPLVQILGKP 73

Query: 1111 MIQRTWERAKLATTLDNVVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALLKLQ 932
            MIQRTWER+KLATTLD++VVATDDE+IAECCRGFGADVIMTSESCRNGTERCNEAL KL 
Sbjct: 74   MIQRTWERSKLATTLDHIVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALEKLD 133

Query: 931  KKYDIVVNIQGDEPLIEPEIIDGIVKSLQGAPDAVFSTAVTSLKPEDAHDPNRVKCVVDN 752
            KKYD+VVNIQGDEPLIEPEIIDG+VK+LQ  PDAVFSTAVTSLKPED  DPNRVKCVVDN
Sbjct: 134  KKYDVVVNIQGDEPLIEPEIIDGVVKALQVTPDAVFSTAVTSLKPEDGLDPNRVKCVVDN 193

Query: 751  YGYAIYFSRGLIPFNKSGKVNPNFPYLLHLGIQSYDTKFLRIYXXXXXXXXXXXXXXXXX 572
             GYAIYFSRGLIP+NKSGKVNP+FPY+LHLGIQS+D+KFL++Y                 
Sbjct: 194  RGYAIYFSRGLIPYNKSGKVNPDFPYMLHLGIQSFDSKFLKVYSELQPTPLQQEEDLEQL 253

Query: 571  XXXENGYKMKVIKVNHDAHGVDTPEDVEKIESLMRQRNIS 452
               ENGYKMKVIKV+H+AHGVDTP+DVEKIESLMR+RN+S
Sbjct: 254  KVLENGYKMKVIKVDHEAHGVDTPDDVEKIESLMRERNLS 293


>ref|XP_003526068.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
            [Glycine max]
          Length = 305

 Score =  423 bits (1087), Expect = e-115
 Identities = 216/280 (77%), Positives = 231/280 (82%)
 Frame = -1

Query: 1291 KAWIVHGLLXXXXXXXXXXXAYILHGRQTKFRTRVVGIIPARFASSRFQGKPLVHILGKP 1112
            KAWI+HG++              +  R +KFR+RVVGIIPARFASSRF+GKPLV ILGKP
Sbjct: 27   KAWIIHGIVAGVAIAAAVGARAYMT-RFSKFRSRVVGIIPARFASSRFEGKPLVQILGKP 85

Query: 1111 MIQRTWERAKLATTLDNVVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALLKLQ 932
            MIQRTWERAKLA TLD+VVVATDDEKIA+CCR FGADVIMTSESCRNGTERCNEAL KL 
Sbjct: 86   MIQRTWERAKLAATLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQKLG 145

Query: 931  KKYDIVVNIQGDEPLIEPEIIDGIVKSLQGAPDAVFSTAVTSLKPEDAHDPNRVKCVVDN 752
            KKYDIVVNIQGDEPLIEPEIIDG+VK+LQ APDAVFSTAVTSLKPEDAHDPNRVKCVVDN
Sbjct: 146  KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVDN 205

Query: 751  YGYAIYFSRGLIPFNKSGKVNPNFPYLLHLGIQSYDTKFLRIYXXXXXXXXXXXXXXXXX 572
             GYAIYFSRGLIPFNKSGKVN  FPYLLHLGIQSYD KFL IY                 
Sbjct: 206  RGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDAKFLNIYPNLRPTPLQLEEDLEQL 265

Query: 571  XXXENGYKMKVIKVNHDAHGVDTPEDVEKIESLMRQRNIS 452
               ENGYKMKVIKV+H+AHGVDTPEDV KIESLMR+RN+S
Sbjct: 266  KVLENGYKMKVIKVHHEAHGVDTPEDVGKIESLMRERNLS 305