BLASTX nr result
ID: Coptis24_contig00004531
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004531 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 s... 86 1e-23 ref|XP_003540056.1| PREDICTED: protein transport protein Sec61 s... 86 1e-23 ref|XP_003527201.1| PREDICTED: protein transport protein Sec61 s... 86 1e-23 gb|ACU23375.1| unknown [Glycine max] 86 1e-23 ref|NP_001241126.1| uncharacterized protein LOC100798372 [Glycin... 86 1e-23 >ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 subunit alpha-like [Glycine max] Length = 476 Score = 86.3 bits (212), Expect(2) = 1e-23 Identities = 43/44 (97%), Positives = 43/44 (97%) Frame = -2 Query: 203 GADPFYWMRVILASNCGTVMELGITPIVTSGLVMQLLAGSKIIE 72 GADPFYWMRVILASN GTVMELGITPIVTSGLVMQLLAGSKIIE Sbjct: 60 GADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIE 103 Score = 48.5 bits (114), Expect(2) = 1e-23 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = -3 Query: 88 DQKSLRNGAQKLLGILIAVGEAIAYVLSG 2 + ++L NGAQKLLGILIAVGEA+AYVLSG Sbjct: 110 EDRALLNGAQKLLGILIAVGEAVAYVLSG 138 >ref|XP_003540056.1| PREDICTED: protein transport protein Sec61 subunit alpha-like [Glycine max] Length = 476 Score = 86.3 bits (212), Expect(2) = 1e-23 Identities = 43/44 (97%), Positives = 43/44 (97%) Frame = -2 Query: 203 GADPFYWMRVILASNCGTVMELGITPIVTSGLVMQLLAGSKIIE 72 GADPFYWMRVILASN GTVMELGITPIVTSGLVMQLLAGSKIIE Sbjct: 60 GADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIE 103 Score = 48.5 bits (114), Expect(2) = 1e-23 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = -3 Query: 88 DQKSLRNGAQKLLGILIAVGEAIAYVLSG 2 + ++L NGAQKLLGILIAVGEA+AYVLSG Sbjct: 110 EDRALLNGAQKLLGILIAVGEAVAYVLSG 138 >ref|XP_003527201.1| PREDICTED: protein transport protein Sec61 subunit alpha-like [Glycine max] Length = 476 Score = 86.3 bits (212), Expect(2) = 1e-23 Identities = 43/44 (97%), Positives = 43/44 (97%) Frame = -2 Query: 203 GADPFYWMRVILASNCGTVMELGITPIVTSGLVMQLLAGSKIIE 72 GADPFYWMRVILASN GTVMELGITPIVTSGLVMQLLAGSKIIE Sbjct: 60 GADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIE 103 Score = 48.5 bits (114), Expect(2) = 1e-23 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = -3 Query: 88 DQKSLRNGAQKLLGILIAVGEAIAYVLSG 2 + ++L NGAQKLLGILIAVGEA+AYVLSG Sbjct: 110 EDRALLNGAQKLLGILIAVGEAVAYVLSG 138 >gb|ACU23375.1| unknown [Glycine max] Length = 476 Score = 86.3 bits (212), Expect(2) = 1e-23 Identities = 43/44 (97%), Positives = 43/44 (97%) Frame = -2 Query: 203 GADPFYWMRVILASNCGTVMELGITPIVTSGLVMQLLAGSKIIE 72 GADPFYWMRVILASN GTVMELGITPIVTSGLVMQLLAGSKIIE Sbjct: 60 GADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIE 103 Score = 48.5 bits (114), Expect(2) = 1e-23 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = -3 Query: 88 DQKSLRNGAQKLLGILIAVGEAIAYVLSG 2 + ++L NGAQKLLGILIAVGEA+AYVLSG Sbjct: 110 EDRALLNGAQKLLGILIAVGEAVAYVLSG 138 >ref|NP_001241126.1| uncharacterized protein LOC100798372 [Glycine max] gi|255637958|gb|ACU19295.1| unknown [Glycine max] Length = 476 Score = 86.3 bits (212), Expect(2) = 1e-23 Identities = 43/44 (97%), Positives = 43/44 (97%) Frame = -2 Query: 203 GADPFYWMRVILASNCGTVMELGITPIVTSGLVMQLLAGSKIIE 72 GADPFYWMRVILASN GTVMELGITPIVTSGLVMQLLAGSKIIE Sbjct: 60 GADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIE 103 Score = 48.5 bits (114), Expect(2) = 1e-23 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = -3 Query: 88 DQKSLRNGAQKLLGILIAVGEAIAYVLSG 2 + ++L NGAQKLLGILIAVGEA+AYVLSG Sbjct: 110 EDRALLNGAQKLLGILIAVGEAVAYVLSG 138