BLASTX nr result
ID: Coptis24_contig00004530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004530
(1086 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_028490.1| uncharacterized protein [Arabidopsis thaliana] ... 82 2e-13
ref|XP_002884152.1| hypothetical protein ARALYDRAFT_480771 [Arab... 77 1e-11
ref|XP_004146074.1| PREDICTED: uncharacterized protein LOC101219... 64 6e-08
emb|CAN79598.1| hypothetical protein VITISV_020993 [Vitis vinifera] 61 4e-07
gb|AAK62630.1| At2g18690/MSF3.7 [Arabidopsis thaliana] gi|235058... 60 1e-06
>ref|NP_028490.1| uncharacterized protein [Arabidopsis thaliana]
gi|4185135|gb|AAD08938.1| expressed protein [Arabidopsis
thaliana] gi|330251699|gb|AEC06793.1| uncharacterized
protein [Arabidopsis thaliana]
Length = 322
Score = 82.0 bits (201), Expect = 2e-13
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 14/329 (4%)
Frame = +3
Query: 66 MAR-NYSSELQGVMEIVKEVFKLPRRNKKIFLFIILSTMILDSLLFLATITSFKYLSNDL 242
MAR ++ + ++ V+ I+ E KL +NKK+ +++ ++L+ L++ I +L
Sbjct: 1 MARFSFLNVVKDVVAILNESRKLFLKNKKLMFSVLVFPLLLNCLVYFLNIFVIVPEITNL 60
Query: 243 LMKVLPFVSMDPKSSVYLKLLFKIKEDAXXXXXXXXXXXXXXTVVSLFSMVATIYVSAMS 422
+++ S DP S Y L ++ D ++++LFS++ ++ SA++
Sbjct: 61 ILEASLLPSTDPTSPEYAARLMRVFTDFRQFVGSSYIFAAVSSIINLFSVLVIVHASAIT 120
Query: 423 YLGKSLTLTDLCFGIKKIWTRPVITWLYISLCIAGF---TXXXXXXXXXXXXGRGSM--- 584
++ + D K W P++T+ YI+L GF GS+
Sbjct: 121 LKDENFNIKDFPVLSLKSWKGPLVTYFYIALFSLGFGFLFFIILCPILLFSIKSGSVENI 180
Query: 585 --IVVAVGILVFLPVIFXXXXXXXXXXXXXXXXXXEDCYGLQALGKAEXXXXXXXXXXXX 758
+ V G+L+ + + E+ YG QALGKA
Sbjct: 181 GFLAVEAGVLLIIFTV-SQSYFAIYWNLSMVISILEESYGFQALGKA------AKIVKGM 233
Query: 759 XTFLVMILYIPGILFSMINKNQQTVTTQILIAYGVTVNFTIL-----VKILSMMAYTVFY 923
T L ++ G+L S + + Q + +A +T F ++ V++ ++ YTV Y
Sbjct: 234 KTKLFLLNLFFGLLASGLAQILQLINMGRSLAVTLTTGFVLVCLVFAVRMFQLVTYTVAY 293
Query: 924 FELKESHGEQVVVEEDMEYSKMSSIPLED 1010
F+ K G V D+EY +SS L +
Sbjct: 294 FQCKSLQGRDVESLRDVEYMALSSTTLTE 322
>ref|XP_002884152.1| hypothetical protein ARALYDRAFT_480771 [Arabidopsis lyrata subsp.
lyrata] gi|297329992|gb|EFH60411.1| hypothetical protein
ARALYDRAFT_480771 [Arabidopsis lyrata subsp. lyrata]
Length = 323
Score = 76.6 bits (187), Expect = 1e-11
Identities = 72/324 (22%), Positives = 134/324 (41%), Gaps = 14/324 (4%)
Frame = +3
Query: 66 MAR-NYSSELQGVMEIVKEVFKLPRRNKKIFLFIILSTMILDSLLFLATITSFKYLSNDL 242
MAR ++ + L+ V+ I+ E KL +NKK+ +++ ++L+ L++ + +L
Sbjct: 1 MARFSFLNVLKDVVAILNESRKLFLKNKKLMFSVLVFPLLLNCLVYFFNLFVIVPEITNL 60
Query: 243 LMKVLPFVSMDPKSSVYLKLLFKIKEDAXXXXXXXXXXXXXXTVVSLFSMVATIYVSAMS 422
+++ + DP S Y L ++ D ++++LFS++ ++ SA++
Sbjct: 61 ILESSLLPTTDPTSPEYAARLMRVFADFRQFVGHSYIFTAVSSIINLFSVLVIVHASALT 120
Query: 423 YLGKSLTLTDLCFGIKKIWTRPVITWLYISLCIAGF---------TXXXXXXXXXXXXGR 575
+ + + D K W P++T+ YI+L GF
Sbjct: 121 FKDEKFKIKDFPALSLKSWKGPLVTYFYIALFSLGFGFLFFIILCPLLLFSTQFGSVANI 180
Query: 576 GSMIVVAVGILVFLPVIFXXXXXXXXXXXXXXXXXXEDCYGLQALGK-AEXXXXXXXXXX 752
G + V A +L+ V E+ YG QALGK A+
Sbjct: 181 GFLAVEAGALLIIFAV--SQSYFAIYWNLSMVISILEETYGFQALGKAAKIVKGMKTKLF 238
Query: 753 XXXTFLVMILYIPGILFSMINKNQQ---TVTTQILIAYGVTVNFTILVKILSMMAYTVFY 923
F ++ + + +IN + T+TT + V V V++ ++ YTV Y
Sbjct: 239 LLNLFFGLLAFGLAQILQLINLGRSFSVTLTTGL-----VLVCLVFAVRMFQLVTYTVAY 293
Query: 924 FELKESHGEQVVVEEDMEYSKMSS 995
F+ K G+ V D+EY +SS
Sbjct: 294 FQCKSLQGKDVESLRDVEYMALSS 317
>ref|XP_004146074.1| PREDICTED: uncharacterized protein LOC101219186 [Cucumis sativus]
gi|449524022|ref|XP_004169022.1| PREDICTED:
uncharacterized protein LOC101229182 [Cucumis sativus]
Length = 330
Score = 63.9 bits (154), Expect = 6e-08
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 9/316 (2%)
Frame = +3
Query: 96 GVMEIVKEVFKLPRRNKKIFLFIILSTMILDSLLFLATITSFKYLSNDLLMKVLPFVSMD 275
G I E F + +KIF I L+ ++ +++FLA I + L +L S+
Sbjct: 12 GFFGIFTESFNIVLSWRKIFSKITLTLILPLTVVFLAHIQVTELLFFKILKNEDSLNSIP 71
Query: 276 PKSSVYLKLLFKIKEDAXXXXXXXXXXXXXXTVVSLFSMVATIYVSAMSYLGKSLTLTDL 455
SS Y KL I + +++L S A +Y A Y GK +T + +
Sbjct: 72 KNSSKYTKLSDIITSEWISFWLFKAAYFTFFLILALLSSAAVVYTVACVYTGKEITFSKV 131
Query: 456 CFGIKKIWTRPVIT--WLYISLCIAGFTXXXXXXXXXXXXGRGSM-IVVAVGILVFLPVI 626
+ K+W R ++T W ++ + I G G + ++V G+ V V
Sbjct: 132 IGVVPKVWRRLMVTFLWNFVIVLIYNMAFGVLIVLWSAIFGFGGIGVLVISGLSVSYVVG 191
Query: 627 FXXXXXXXXXXXXXXXXXXEDCYGLQALGKAEXXXXXXXXXXXXXTFLVMILYIPG-ILF 803
F ED YG+QA+ K + F +L++ G ++F
Sbjct: 192 F--VYISVVWHLASVVSVLEDVYGIQAMLKGKELIKGKMVLSCGVFFTFTVLFLGGQLVF 249
Query: 804 SMINKNQQTVTTQILIAYGVTVNFTILVKI--LSMMAYTVFYFELKESHGEQV---VVEE 968
+ + + I G+ + F +L K+ ++A T+ YF K H + + ++ +
Sbjct: 250 QTLVVLGSSKYYGLRIVLGI-LCFLLLFKVFLFGLVAQTILYFVCKSYHHQNIDKPLLSD 308
Query: 969 DMEYSKMSSIPLEDSD 1016
+E +PL++ D
Sbjct: 309 HLEVYHGDYVPLKEQD 324
>emb|CAN79598.1| hypothetical protein VITISV_020993 [Vitis vinifera]
Length = 322
Score = 61.2 bits (147), Expect = 4e-07
Identities = 79/310 (25%), Positives = 130/310 (41%), Gaps = 13/310 (4%)
Frame = +3
Query: 66 MARNYSSELQGVMEIVKEVFKLPRRNKKIFLFIILSTMILDSLLFLATITSFKYLSNDLL 245
+A + + + V+ I +E K P RN K+ L I+L + +LL L + L+
Sbjct: 17 LASSATGQPINVIGIFREAIKTPARNGKLMLQIMLLVVSPCTLLALL----HHLFAXPLM 72
Query: 246 MKVLPFVSMDPKSSVYLKLLFKIKEDAXXXXXXXXXXXXXXTVVSLFSMVATIYVSAMSY 425
KV + K +V+ ED VS+F + TIY +AM+Y
Sbjct: 73 EKVEDNYN---KPTVHW-------EDLRALLGIEVPFLVGFWXVSMFGITITIYAAAMTY 122
Query: 426 LGKSLTLTDLCFGIKKIWTRPVITWLYIS-------LCIAGF--TXXXXXXXXXXXXGRG 578
+S+ L DL I+ W +P+IT LY+S + + G + RG
Sbjct: 123 ARRSVCLKDLLSCIQ--WKKPIITSLYVSFIPVVYAILVIGLIKSINLITREDAGQAWRG 180
Query: 579 SMIVVAVGILVFLPVIFXXXXXXXXXXXXXXXXXXEDCYGLQALGKAEXXXXXXXXXXXX 758
+ V+A + ++L + ++CYG +AL KA
Sbjct: 181 ATAVMAALLYIYLTSV--------STLGLVVSVMDDECYGAKALEKAVKLSXGRKLQGFF 232
Query: 759 XTFLVMILYIP-GILFSMIN-KNQQTVTTQILIAYG--VTVNFTILVKILSMMAYTVFYF 926
++ +L IP ILF + + + + L +G TV F LV +LS + + VFY
Sbjct: 233 LMLILELLSIPIYILFYVASTDDDDEIGAVTLFGFGFLATVLF-CLVNMLSYVVFAVFYS 291
Query: 927 ELKESHGEQV 956
E K++ GE +
Sbjct: 292 ECKKNSGEGI 301
>gb|AAK62630.1| At2g18690/MSF3.7 [Arabidopsis thaliana] gi|23505851|gb|AAN28785.1|
At2g18690/MSF3.7 [Arabidopsis thaliana]
Length = 295
Score = 59.7 bits (143), Expect = 1e-06
Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Frame = +3
Query: 66 MAR-NYSSELQGVMEIVKEVFKLPRRNKKIFLFIILSTMILDSLLFLATITSFKYLSNDL 242
MAR ++ + ++ V+ I+ E KL +NKK+ +++ ++L+ L++ I +L
Sbjct: 1 MARFSFLNVVKDVVAILNESRKLFLKNKKLMFSVLVFPLLLNCLVYFLNIFVIVPEITNL 60
Query: 243 LMKVLPFVSMDPKSSVYLKLLFKIKEDAXXXXXXXXXXXXXXTVVSLFSMVATIYVSAMS 422
+++ S DP S Y L ++ D ++++LFS++ ++ SA++
Sbjct: 61 ILEASLLPSTDPTSPEYAARLMRVFTDFRQFVGSSYIFAAVSSIINLFSVLVIVHASAIT 120
Query: 423 YLGKSLTLTDLCFGIKKIWTRPVITWLYISLCIAGF---TXXXXXXXXXXXXGRGSM--- 584
++ + D K W P++T+ YI+L GF GS+
Sbjct: 121 LKDENFNIKDFPVLSLKSWKGPLVTYFYIALFSLGFGFLFFIILCPILLFSIKSGSVENI 180
Query: 585 --IVVAVGILVFLPVIFXXXXXXXXXXXXXXXXXXEDCYGLQALGKA 719
+ V G+L+ + + E+ YG QALGKA
Sbjct: 181 GFLAVEAGVLLIIFTV-SQSYFAIYWNLSMVISILEESYGFQALGKA 226