BLASTX nr result

ID: Coptis24_contig00004495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004495
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW78548.1| protein translation factor SUI1 [Zea mays]             186   7e-45
gb|EEC79466.1| hypothetical protein OsI_20483 [Oryza sativa Indi...   185   1e-44
ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 h...   184   2e-44
ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 h...   181   2e-43
gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japo...   180   4e-43

>gb|AFW78548.1| protein translation factor SUI1 [Zea mays]
          Length = 185

 Score =  186 bits (471), Expect = 7e-45
 Identities = 93/122 (76%), Positives = 105/122 (86%), Gaps = 3/122 (2%)
 Frame = -1

Query: 542 KVNQQSFMVDVDVQLPTAFDPFAEAEAL---SGPGTKEYVHIRIQQRNGKKTLTTVQGLK 372
           K  Q SFM D+DVQLP+AFDPFAEA A    +GPGTK+YVH+RIQQRNG+K+LTTVQGLK
Sbjct: 64  KPQQPSFMSDLDVQLPSAFDPFAEANAEDSGAGPGTKDYVHVRIQQRNGRKSLTTVQGLK 123

Query: 371 KELSYDKILKDLKKGFCCNGTVVLDATLGKVIQLQGDQRKNVADFFVKAGILKKDSIKIH 192
           KE SY+KILKDLKK FCCNGTVV D  LG+VIQLQGDQRKNVA F V+AGI KK++IKIH
Sbjct: 124 KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKENIKIH 183

Query: 191 GF 186
           GF
Sbjct: 184 GF 185


>gb|EEC79466.1| hypothetical protein OsI_20483 [Oryza sativa Indica Group]
           gi|222632108|gb|EEE64240.1| hypothetical protein
           OsJ_19073 [Oryza sativa Japonica Group]
          Length = 213

 Score =  185 bits (469), Expect = 1e-44
 Identities = 95/126 (75%), Positives = 106/126 (84%), Gaps = 4/126 (3%)
 Frame = -1

Query: 551 CMHKVNQQ-SFMVDVDVQLPTAFDPFAEAEAL---SGPGTKEYVHIRIQQRNGKKTLTTV 384
           C    NQQ SFM D+DVQLP+AFDPFAEA A    +GPG K+YVH+RIQQRNG+K+LTTV
Sbjct: 88  CPVPTNQQTSFMSDLDVQLPSAFDPFAEANAEDSGAGPGAKDYVHVRIQQRNGRKSLTTV 147

Query: 383 QGLKKELSYDKILKDLKKGFCCNGTVVLDATLGKVIQLQGDQRKNVADFFVKAGILKKDS 204
           QGLKKE SY+KILKDLKK FCCNGTVV D  LG+VIQLQGDQRKNVA F V+AGI KKD+
Sbjct: 148 QGLKKEYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKDN 207

Query: 203 IKIHGF 186
           IKIHGF
Sbjct: 208 IKIHGF 213


>ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis
           sativus] gi|449523439|ref|XP_004168731.1| PREDICTED:
           protein translation factor SUI1 homolog 2-like [Cucumis
           sativus]
          Length = 112

 Score =  184 bits (467), Expect = 2e-44
 Identities = 87/112 (77%), Positives = 98/112 (87%)
 Frame = -1

Query: 521 MVDVDVQLPTAFDPFAEAEALSGPGTKEYVHIRIQQRNGKKTLTTVQGLKKELSYDKILK 342
           MVD+DVQ+P+AFDPFA+A+    PGTKEYVHIR+QQRNGKK LTTVQGLKKE SYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 341 DLKKGFCCNGTVVLDATLGKVIQLQGDQRKNVADFFVKAGILKKDSIKIHGF 186
           DLKK FCCNG VV D  LGK+IQLQGDQRKNV+ F V+AG++KKD IKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112


>ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Glycine
           max]
          Length = 112

 Score =  181 bits (458), Expect = 2e-43
 Identities = 84/112 (75%), Positives = 98/112 (87%)
 Frame = -1

Query: 521 MVDVDVQLPTAFDPFAEAEALSGPGTKEYVHIRIQQRNGKKTLTTVQGLKKELSYDKILK 342
           MVD+++Q+P+AFDPFAEA     PG KEYVHIRIQQRNGKK+LTTVQGLKKE SY+KILK
Sbjct: 1   MVDLEIQVPSAFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILK 60

Query: 341 DLKKGFCCNGTVVLDATLGKVIQLQGDQRKNVADFFVKAGILKKDSIKIHGF 186
           DLKK FCCNGTVV D  LGK+IQLQGDQRKNV+ F V+AG+++KD +KIHGF
Sbjct: 61  DLKKDFCCNGTVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQVKIHGF 112


>gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japonica Group]
          Length = 230

 Score =  180 bits (456), Expect = 4e-43
 Identities = 88/120 (73%), Positives = 105/120 (87%), Gaps = 3/120 (2%)
 Frame = -1

Query: 536 NQQSFMVDVDVQLPTAFDPFAEAEAL---SGPGTKEYVHIRIQQRNGKKTLTTVQGLKKE 366
           +QQSFM D+D+Q+PTAFDPFAEA A    +  G+K+YVH+RIQQRNG+K+LTTVQGLKKE
Sbjct: 111 HQQSFMSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKE 170

Query: 365 LSYDKILKDLKKGFCCNGTVVLDATLGKVIQLQGDQRKNVADFFVKAGILKKDSIKIHGF 186
            SY+KILKDLKK FCCNGTVV D  LG+VIQLQGDQRKNV++F V+AGI+KK+ IKIHGF
Sbjct: 171 FSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 230


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