BLASTX nr result

ID: Coptis24_contig00004491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004491
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258...   199   1e-48
ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-47
ref|XP_002891830.1| hypothetical protein ARALYDRAFT_474592 [Arab...   195   2e-47
ref|XP_002299101.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-47
ref|NP_001154429.1| uncharacterized protein [Arabidopsis thalian...   194   5e-47

>ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258776 [Vitis vinifera]
           gi|147858690|emb|CAN78878.1| hypothetical protein
           VITISV_024989 [Vitis vinifera]
           gi|297746483|emb|CBI16539.3| unnamed protein product
           [Vitis vinifera]
          Length = 212

 Score =  199 bits (506), Expect = 1e-48
 Identities = 102/120 (85%), Positives = 109/120 (90%), Gaps = 1/120 (0%)
 Frame = -2

Query: 796 EKEERYYTTRGSVGV-DENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGC 620
           EKE+RYYTTRGS+G+ D+NGK LMD G E+   +  VWPKLFISLSSKEKEEDFMAMKGC
Sbjct: 96  EKEDRYYTTRGSMGMMDDNGKVLMDHGGED---RGTVWPKLFISLSSKEKEEDFMAMKGC 152

Query: 619 KLPQRPKKRAKFIQKTLLLVSPGAWLSDLCQERYEVREKKTTKKRPRGLKAMGSMESDSE 440
           KLPQRPKKRAK IQKTLLLVSPGAWLSDLCQERYEVREKK +KKRPRGLKAMGSMESDSE
Sbjct: 153 KLPQRPKKRAKLIQKTLLLVSPGAWLSDLCQERYEVREKKASKKRPRGLKAMGSMESDSE 212


>ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|222862715|gb|EEF00222.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  196 bits (497), Expect = 2e-47
 Identities = 96/119 (80%), Positives = 107/119 (89%)
 Frame = -2

Query: 796 EKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGCK 617
           EKE+RYYTTRGSVG+DENGK  MD    N   K +VWPKL+ +LSSKEKEEDFMAMKGCK
Sbjct: 101 EKEDRYYTTRGSVGLDENGKVSMD--GNNGDDKAHVWPKLYTTLSSKEKEEDFMAMKGCK 158

Query: 616 LPQRPKKRAKFIQKTLLLVSPGAWLSDLCQERYEVREKKTTKKRPRGLKAMGSMESDSE 440
           LPQRPKKRAK IQ++LLLVSPGAWL+D+CQERYEVREKK++KKRPRGLKAMGSMESDSE
Sbjct: 159 LPQRPKKRAKIIQRSLLLVSPGAWLTDMCQERYEVREKKSSKKRPRGLKAMGSMESDSE 217


>ref|XP_002891830.1| hypothetical protein ARALYDRAFT_474592 [Arabidopsis lyrata subsp.
           lyrata] gi|297337672|gb|EFH68089.1| hypothetical protein
           ARALYDRAFT_474592 [Arabidopsis lyrata subsp. lyrata]
          Length = 205

 Score =  195 bits (496), Expect = 2e-47
 Identities = 95/119 (79%), Positives = 109/119 (91%)
 Frame = -2

Query: 796 EKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGCK 617
           EKE+RYYTTRGS+G+DE+GK + +   E +K   +VWPKLFI+LS+KEKEEDF+AMKGCK
Sbjct: 90  EKEDRYYTTRGSMGIDESGKIIKEPVKETKK---HVWPKLFITLSNKEKEEDFLAMKGCK 146

Query: 616 LPQRPKKRAKFIQKTLLLVSPGAWLSDLCQERYEVREKKTTKKRPRGLKAMGSMESDSE 440
           LPQRPKKRAK +QKTLLLVSPGAWLSDLC+ERYEVREKKT+KKRPRGLKAMGSMESDSE
Sbjct: 147 LPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYEVREKKTSKKRPRGLKAMGSMESDSE 205


>ref|XP_002299101.1| predicted protein [Populus trichocarpa] gi|222846359|gb|EEE83906.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  195 bits (495), Expect = 3e-47
 Identities = 96/119 (80%), Positives = 108/119 (90%)
 Frame = -2

Query: 796 EKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGCK 617
           +KE+RYYTTRGS+G+D+N K LMD    N K++  VWP+LFI+LS+KEKEEDFMAMKGCK
Sbjct: 85  DKEDRYYTTRGSMGLDDNSKILMD----NVKEEKVVWPRLFIALSNKEKEEDFMAMKGCK 140

Query: 616 LPQRPKKRAKFIQKTLLLVSPGAWLSDLCQERYEVREKKTTKKRPRGLKAMGSMESDSE 440
            PQRPKKRAK IQ+TLLLVSPGAWLSDLCQERYEVREKKT+KKRPRGLKAMGSMESDSE
Sbjct: 141 PPQRPKKRAKLIQRTLLLVSPGAWLSDLCQERYEVREKKTSKKRPRGLKAMGSMESDSE 199


>ref|NP_001154429.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332195110|gb|AEE33231.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 195

 Score =  194 bits (493), Expect = 5e-47
 Identities = 94/119 (78%), Positives = 109/119 (91%)
 Frame = -2

Query: 796 EKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGCK 617
           EKE+RYYTTRGS+G+DE+GK + +   E +K   +VWPKL+I+LS+KEKEEDF+AMKGCK
Sbjct: 80  EKEDRYYTTRGSMGIDESGKIIKEPVKETKK---HVWPKLYIALSNKEKEEDFLAMKGCK 136

Query: 616 LPQRPKKRAKFIQKTLLLVSPGAWLSDLCQERYEVREKKTTKKRPRGLKAMGSMESDSE 440
           LPQRPKKRAK +QKTLLLVSPGAWLSDLC+ERYEVREKKT+KKRPRGLKAMGSMESDSE
Sbjct: 137 LPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYEVREKKTSKKRPRGLKAMGSMESDSE 195


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