BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004489
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   130   3e-28
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   126   6e-27
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   122   1e-25
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   120   4e-25

>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  130 bits (327), Expect = 3e-28
 Identities = 60/65 (92%), Positives = 63/65 (96%)
 Frame = -2

Query: 755 ERLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKFISKIVQREILVRDAVRFHLFKDGT 576
           E+LAIAFGLIF+PPGLPIRV+KNLRVCGDCHNATKFISKI QREILVRDAVRFHLFKDGT
Sbjct: 677 EKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGT 736

Query: 575 CSCED 561
           CSC D
Sbjct: 737 CSCGD 741


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  126 bits (316), Expect = 6e-27
 Identities = 59/65 (90%), Positives = 61/65 (93%)
 Frame = -2

Query: 755 ERLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKFISKIVQREILVRDAVRFHLFKDGT 576
           E+LAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATK+ISKI QREILVRDA RFHLFKDG 
Sbjct: 681 EKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGR 740

Query: 575 CSCED 561
           CSC D
Sbjct: 741 CSCGD 745


>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  125 bits (313), Expect = 1e-26
 Identities = 59/65 (90%), Positives = 62/65 (95%)
 Frame = -2

Query: 755 ERLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKFISKIVQREILVRDAVRFHLFKDGT 576
           E+LAIAFGL+FIP GLPIRVVKNLRVCGDCHNATK+ISKI QREILVRDAVRFHLFKDGT
Sbjct: 677 EKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGT 736

Query: 575 CSCED 561
           CSC D
Sbjct: 737 CSCGD 741


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  122 bits (305), Expect = 1e-25
 Identities = 56/65 (86%), Positives = 59/65 (90%)
 Frame = -2

Query: 755 ERLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKFISKIVQREILVRDAVRFHLFKDGT 576
           E+LAIAFGL+FIPPGLPIRVVKNLRVC DCHNATK+ISKI  REILVRD  RFHLFKDGT
Sbjct: 682 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGT 741

Query: 575 CSCED 561
           CSC D
Sbjct: 742 CSCGD 746


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  120 bits (300), Expect = 4e-25
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = -2

Query: 755 ERLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKFISKIVQREILVRDAVRFHLFKDGT 576
           E+LAIAFGL+FIP GL IRVVKNLRVCGDCHNATK+IS+I QREILVRDAVRFHLFKDG 
Sbjct: 677 EKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGV 736

Query: 575 CSCED 561
           CSC D
Sbjct: 737 CSCGD 741