BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004484
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ...   552   e-155
ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo...   538   e-150
ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc...   530   e-148
ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|1...   526   e-147
gb|ADE77253.1| unknown [Picea sitchensis]                             514   e-143

>ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera]
            gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5
            homolog A isoform 2 [Vitis vinifera]
            gi|296088090|emb|CBI35449.3| unnamed protein product
            [Vitis vinifera]
          Length = 383

 Score =  552 bits (1423), Expect = e-155
 Identities = 280/385 (72%), Positives = 322/385 (83%), Gaps = 1/385 (0%)
 Frame = -2

Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177
            MEL +I+DAFDRVAKKQKLS SK+QEVID VG+EI  ALAKLQ   DPA+  + +SI+ E
Sbjct: 1    MELSNIKDAFDRVAKKQKLSSSKSQEVIDQVGREIEDALAKLQA--DPASPVDQKSILME 58

Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997
            L  KL       QLEGSQKELN+ LSKY +LLEK FNPDISKAYRNVDFD HT+NQIIA 
Sbjct: 59   LKTKLSIIGSQSQLEGSQKELNMNLSKYPRLLEKSFNPDISKAYRNVDFDFHTVNQIIAS 118

Query: 996  HFYRQGLFDLGDCFMNEAKESL-VALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820
            HFYRQGLFD+G+C +NEA E    ALKS ++EM+QIL+AMK+R+LEPA+ W + +R+ L 
Sbjct: 119  HFYRQGLFDIGECLINEAGEPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNREKLK 178

Query: 819  QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640
            Q+GS LELKLHRLQFVEILQKG R +AL YA+T L+ FA+ HM E QKLM  LLW G+L+
Sbjct: 179  QNGSNLELKLHRLQFVEILQKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWVGRLD 238

Query: 639  CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460
             SPY  ++ P+ WE LAEELT+QFC+LLGQSYESPL+V I AG++GLPTLLKLANVMAAK
Sbjct: 239  SSPYSELMVPSLWEKLAEELTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANVMAAK 298

Query: 459  KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280
            KQEW AMKQLPVP+DLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSI+KLSK
Sbjct: 299  KQEWQAMKQLPVPVDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIMKLSK 358

Query: 279  SSTRTFKCPYCPLEATVAQCRQLYF 205
            SSTR FKCPYCP E+TV QC QLYF
Sbjct: 359  SSTRMFKCPYCPNESTVGQCMQLYF 383


>ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max]
            gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5
            homolog A-like isoform 2 [Glycine max]
          Length = 385

 Score =  538 bits (1386), Expect = e-150
 Identities = 268/385 (69%), Positives = 316/385 (82%), Gaps = 1/385 (0%)
 Frame = -2

Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177
            MEL SI+DAFDRVAKKQKLS SK+QEV+D VG EI QALA +Q  +DP+   + +S++TE
Sbjct: 1    MELSSIKDAFDRVAKKQKLSSSKSQEVVDQVGCEIEQALATIQSSHDPSAPVDQKSVLTE 60

Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997
            L  KL    PL QLEGS KELN+ L+KY KLLEK  NPDISKAYRNVDFDTH +NQIIA 
Sbjct: 61   LKFKLNAIGPLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVNQIIAN 120

Query: 996  HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820
            HFY QGLFDLGD  +NEA E    AL+S ++EM+QI+ AM+ RNL+PA+ W + +R+ LV
Sbjct: 121  HFYHQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180

Query: 819  QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640
            Q GS LELK+H LQFVE+LQ G R +AL+YA+T L+ FA+ +  EF KLMG LL+AG+LE
Sbjct: 181  QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240

Query: 639  CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460
             SPY  +LSP HWE   EELT+QFC LLGQSYE+PL+V + AGV+GLPTLLKLANVMAAK
Sbjct: 241  SSPYSELLSPIHWEMTTEELTRQFCTLLGQSYENPLSVAVAAGVEGLPTLLKLANVMAAK 300

Query: 459  KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280
            KQEW  MKQLPVP++LG+EFQFHSIFVCPVSRDQGSEENPPML+PC HVLCKQSI+KLSK
Sbjct: 301  KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360

Query: 279  SSTRTFKCPYCPLEATVAQCRQLYF 205
            +STRTFKCPYCP EATVA C+QLYF
Sbjct: 361  NSTRTFKCPYCPAEATVANCKQLYF 385


>ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max]
          Length = 385

 Score =  530 bits (1364), Expect = e-148
 Identities = 263/385 (68%), Positives = 314/385 (81%), Gaps = 1/385 (0%)
 Frame = -2

Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177
            MEL SI+DAFDRV KKQK+S SK+QEV+D VG+EI QALA +Q  +DP++  + +S +TE
Sbjct: 1    MELSSIKDAFDRVTKKQKISSSKSQEVVDQVGREIEQALATIQSPHDPSSPVDQKSALTE 60

Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997
            L  KL     L QLEGS KELN+ L+KY KLLEK  NPDISKAYRNVDFDTH ++QIIA 
Sbjct: 61   LKFKLNAIGSLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVDQIIAN 120

Query: 996  HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820
            HFYRQGLFDLGD  +NEA E    AL+S ++EM+QI+ AM+ RNL+PA+ W + +R+ LV
Sbjct: 121  HFYRQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180

Query: 819  QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640
            Q GS LELK+H LQFVE+LQ G R +AL+YA+T L+ FA+ +  EF KLMG LL+AG+LE
Sbjct: 181  QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240

Query: 639  CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460
             SPY  +LSP HWE   EEL +QFC LLGQSYE+PL+V + AGV+GLP LLKLANVMAAK
Sbjct: 241  SSPYSELLSPIHWEMTTEELARQFCTLLGQSYENPLSVAVAAGVEGLPILLKLANVMAAK 300

Query: 459  KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280
            KQEW  MKQLPVP++LG+EFQFHSIFVCPVSRDQGSEENPPML+PC HVLCKQSI+KLSK
Sbjct: 301  KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360

Query: 279  SSTRTFKCPYCPLEATVAQCRQLYF 205
            +STRTFKCPYCP EATVA C+QLYF
Sbjct: 361  NSTRTFKCPYCPAEATVANCKQLYF 385


>ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|118480973|gb|ABK92440.1|
            unknown [Populus trichocarpa] gi|222849617|gb|EEE87164.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  526 bits (1354), Expect = e-147
 Identities = 258/385 (67%), Positives = 318/385 (82%), Gaps = 1/385 (0%)
 Frame = -2

Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177
            MEL + +DAFDRVA+KQKLS+SK QEVID V QEI QAL K+Q V DP +  + +SI+TE
Sbjct: 1    MELTTAKDAFDRVAEKQKLSFSKCQEVIDQVSQEIEQALVKIQSVEDPMSPVDQKSILTE 60

Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997
            L  KL   +PL  LEGSQKELN+ LSK+ K+LEK F PDISKAYR+VDFD H +NQIIA 
Sbjct: 61   LKHKLIAISPLKLLEGSQKELNLNLSKFPKVLEKSF-PDISKAYRDVDFDFHIVNQIIAS 119

Query: 996  HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820
            HFY QGLFDLGDC +NEA E    AL+S ++E++QILEAM+ +N+EPA++WA+T+R+ LV
Sbjct: 120  HFYHQGLFDLGDCLINEAGEPEAAALRSHFLELHQILEAMRIKNIEPALKWASTNREKLV 179

Query: 819  QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640
            Q+GS +ELKLH+LQFVEIL++G R +AL YAKT+L+ FA+ H+ EFQKL+  ++W G+LE
Sbjct: 180  QNGSNIELKLHQLQFVEILKRGNRADALNYAKTHLASFASSHLKEFQKLIVCIMWIGRLE 239

Query: 639  CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460
              P+  + +P HWE L EEL + FCN +GQS +SPL+V I AG++GLPTLLKLANVMAAK
Sbjct: 240  NCPHSELFTPIHWEKLTEELARDFCNFVGQSLQSPLSVAIVAGIEGLPTLLKLANVMAAK 299

Query: 459  KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280
            KQEW A+KQLPVP++LG+EFQFHSIFVCPVSRDQGSEENPPML+PC HVLCKQSI+KLSK
Sbjct: 300  KQEWQALKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 359

Query: 279  SSTRTFKCPYCPLEATVAQCRQLYF 205
             S+R FKCPYCP EA+ AQCRQLYF
Sbjct: 360  GSSRAFKCPYCPAEASAAQCRQLYF 384


>gb|ADE77253.1| unknown [Picea sitchensis]
          Length = 384

 Score =  514 bits (1324), Expect = e-143
 Identities = 249/385 (64%), Positives = 310/385 (80%), Gaps = 1/385 (0%)
 Frame = -2

Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177
            MEL +I+DAFDRV+K+QK SY+KTQ++ID VG+EI  AL KL   ++ +  D   +++ E
Sbjct: 1    MELNTIKDAFDRVSKRQKTSYTKTQDIIDSVGKEIELALNKLLNASEGSGVDQ-NAVIAE 59

Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997
            LN KL E  P  QL GSQKELNV LSKY K+++K F PDI+KAYR V+FD H IN I+A 
Sbjct: 60   LNAKLNEIGPTNQLGGSQKELNVALSKYGKVVDKQFYPDIAKAYREVEFDGHIINMIVAL 119

Query: 996  HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820
            HFYRQGLF+LGDCF++EA E    +LK+P++EMY++LE MK+RNL+PA+ WA+ H D LV
Sbjct: 120  HFYRQGLFELGDCFISEANEHGAASLKAPFVEMYEMLEQMKARNLQPALAWASAHSDELV 179

Query: 819  QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640
            + GS LE KLH LQ+++IL++G + +AL +A+++ + FA  HM E QKLMG LLW G+LE
Sbjct: 180  RKGSALEFKLHALQYMQILERGIQRDALTFARSSFAPFAPLHMEEIQKLMGCLLWTGRLE 239

Query: 639  CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460
             SPY  +LS +HW+ L+ ELTQ+ C+LLGQSY+SPL+V I AG Q LPTLLKL+NVMA K
Sbjct: 240  NSPYSELLSSSHWDALSLELTQECCSLLGQSYKSPLHVTISAGCQALPTLLKLSNVMANK 299

Query: 459  KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280
            KQEW  M+QLPV ++L REFQFHSIF CPVSRDQ +EENPPMLMPCGHVLCKQSIVKLSK
Sbjct: 300  KQEWQTMRQLPVEIELDREFQFHSIFACPVSRDQSTEENPPMLMPCGHVLCKQSIVKLSK 359

Query: 279  SSTRTFKCPYCPLEATVAQCRQLYF 205
            S+TRTFKCPYCPLEATVAQCRQLYF
Sbjct: 360  SNTRTFKCPYCPLEATVAQCRQLYF 384