BLASTX nr result
ID: Coptis24_contig00004484
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004484 (1423 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ... 552 e-155 ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo... 538 e-150 ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc... 530 e-148 ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|1... 526 e-147 gb|ADE77253.1| unknown [Picea sitchensis] 514 e-143 >ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera] gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5 homolog A isoform 2 [Vitis vinifera] gi|296088090|emb|CBI35449.3| unnamed protein product [Vitis vinifera] Length = 383 Score = 552 bits (1423), Expect = e-155 Identities = 280/385 (72%), Positives = 322/385 (83%), Gaps = 1/385 (0%) Frame = -2 Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177 MEL +I+DAFDRVAKKQKLS SK+QEVID VG+EI ALAKLQ DPA+ + +SI+ E Sbjct: 1 MELSNIKDAFDRVAKKQKLSSSKSQEVIDQVGREIEDALAKLQA--DPASPVDQKSILME 58 Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997 L KL QLEGSQKELN+ LSKY +LLEK FNPDISKAYRNVDFD HT+NQIIA Sbjct: 59 LKTKLSIIGSQSQLEGSQKELNMNLSKYPRLLEKSFNPDISKAYRNVDFDFHTVNQIIAS 118 Query: 996 HFYRQGLFDLGDCFMNEAKESL-VALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820 HFYRQGLFD+G+C +NEA E ALKS ++EM+QIL+AMK+R+LEPA+ W + +R+ L Sbjct: 119 HFYRQGLFDIGECLINEAGEPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNREKLK 178 Query: 819 QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640 Q+GS LELKLHRLQFVEILQKG R +AL YA+T L+ FA+ HM E QKLM LLW G+L+ Sbjct: 179 QNGSNLELKLHRLQFVEILQKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWVGRLD 238 Query: 639 CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460 SPY ++ P+ WE LAEELT+QFC+LLGQSYESPL+V I AG++GLPTLLKLANVMAAK Sbjct: 239 SSPYSELMVPSLWEKLAEELTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANVMAAK 298 Query: 459 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280 KQEW AMKQLPVP+DLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSI+KLSK Sbjct: 299 KQEWQAMKQLPVPVDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIMKLSK 358 Query: 279 SSTRTFKCPYCPLEATVAQCRQLYF 205 SSTR FKCPYCP E+TV QC QLYF Sbjct: 359 SSTRMFKCPYCPNESTVGQCMQLYF 383 >ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max] gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5 homolog A-like isoform 2 [Glycine max] Length = 385 Score = 538 bits (1386), Expect = e-150 Identities = 268/385 (69%), Positives = 316/385 (82%), Gaps = 1/385 (0%) Frame = -2 Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177 MEL SI+DAFDRVAKKQKLS SK+QEV+D VG EI QALA +Q +DP+ + +S++TE Sbjct: 1 MELSSIKDAFDRVAKKQKLSSSKSQEVVDQVGCEIEQALATIQSSHDPSAPVDQKSVLTE 60 Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997 L KL PL QLEGS KELN+ L+KY KLLEK NPDISKAYRNVDFDTH +NQIIA Sbjct: 61 LKFKLNAIGPLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVNQIIAN 120 Query: 996 HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820 HFY QGLFDLGD +NEA E AL+S ++EM+QI+ AM+ RNL+PA+ W + +R+ LV Sbjct: 121 HFYHQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180 Query: 819 QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640 Q GS LELK+H LQFVE+LQ G R +AL+YA+T L+ FA+ + EF KLMG LL+AG+LE Sbjct: 181 QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240 Query: 639 CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460 SPY +LSP HWE EELT+QFC LLGQSYE+PL+V + AGV+GLPTLLKLANVMAAK Sbjct: 241 SSPYSELLSPIHWEMTTEELTRQFCTLLGQSYENPLSVAVAAGVEGLPTLLKLANVMAAK 300 Query: 459 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280 KQEW MKQLPVP++LG+EFQFHSIFVCPVSRDQGSEENPPML+PC HVLCKQSI+KLSK Sbjct: 301 KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360 Query: 279 SSTRTFKCPYCPLEATVAQCRQLYF 205 +STRTFKCPYCP EATVA C+QLYF Sbjct: 361 NSTRTFKCPYCPAEATVANCKQLYF 385 >ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max] Length = 385 Score = 530 bits (1364), Expect = e-148 Identities = 263/385 (68%), Positives = 314/385 (81%), Gaps = 1/385 (0%) Frame = -2 Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177 MEL SI+DAFDRV KKQK+S SK+QEV+D VG+EI QALA +Q +DP++ + +S +TE Sbjct: 1 MELSSIKDAFDRVTKKQKISSSKSQEVVDQVGREIEQALATIQSPHDPSSPVDQKSALTE 60 Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997 L KL L QLEGS KELN+ L+KY KLLEK NPDISKAYRNVDFDTH ++QIIA Sbjct: 61 LKFKLNAIGSLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVDQIIAN 120 Query: 996 HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820 HFYRQGLFDLGD +NEA E AL+S ++EM+QI+ AM+ RNL+PA+ W + +R+ LV Sbjct: 121 HFYRQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180 Query: 819 QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640 Q GS LELK+H LQFVE+LQ G R +AL+YA+T L+ FA+ + EF KLMG LL+AG+LE Sbjct: 181 QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240 Query: 639 CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460 SPY +LSP HWE EEL +QFC LLGQSYE+PL+V + AGV+GLP LLKLANVMAAK Sbjct: 241 SSPYSELLSPIHWEMTTEELARQFCTLLGQSYENPLSVAVAAGVEGLPILLKLANVMAAK 300 Query: 459 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280 KQEW MKQLPVP++LG+EFQFHSIFVCPVSRDQGSEENPPML+PC HVLCKQSI+KLSK Sbjct: 301 KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360 Query: 279 SSTRTFKCPYCPLEATVAQCRQLYF 205 +STRTFKCPYCP EATVA C+QLYF Sbjct: 361 NSTRTFKCPYCPAEATVANCKQLYF 385 >ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|118480973|gb|ABK92440.1| unknown [Populus trichocarpa] gi|222849617|gb|EEE87164.1| predicted protein [Populus trichocarpa] Length = 384 Score = 526 bits (1354), Expect = e-147 Identities = 258/385 (67%), Positives = 318/385 (82%), Gaps = 1/385 (0%) Frame = -2 Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177 MEL + +DAFDRVA+KQKLS+SK QEVID V QEI QAL K+Q V DP + + +SI+TE Sbjct: 1 MELTTAKDAFDRVAEKQKLSFSKCQEVIDQVSQEIEQALVKIQSVEDPMSPVDQKSILTE 60 Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997 L KL +PL LEGSQKELN+ LSK+ K+LEK F PDISKAYR+VDFD H +NQIIA Sbjct: 61 LKHKLIAISPLKLLEGSQKELNLNLSKFPKVLEKSF-PDISKAYRDVDFDFHIVNQIIAS 119 Query: 996 HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820 HFY QGLFDLGDC +NEA E AL+S ++E++QILEAM+ +N+EPA++WA+T+R+ LV Sbjct: 120 HFYHQGLFDLGDCLINEAGEPEAAALRSHFLELHQILEAMRIKNIEPALKWASTNREKLV 179 Query: 819 QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640 Q+GS +ELKLH+LQFVEIL++G R +AL YAKT+L+ FA+ H+ EFQKL+ ++W G+LE Sbjct: 180 QNGSNIELKLHQLQFVEILKRGNRADALNYAKTHLASFASSHLKEFQKLIVCIMWIGRLE 239 Query: 639 CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460 P+ + +P HWE L EEL + FCN +GQS +SPL+V I AG++GLPTLLKLANVMAAK Sbjct: 240 NCPHSELFTPIHWEKLTEELARDFCNFVGQSLQSPLSVAIVAGIEGLPTLLKLANVMAAK 299 Query: 459 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280 KQEW A+KQLPVP++LG+EFQFHSIFVCPVSRDQGSEENPPML+PC HVLCKQSI+KLSK Sbjct: 300 KQEWQALKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 359 Query: 279 SSTRTFKCPYCPLEATVAQCRQLYF 205 S+R FKCPYCP EA+ AQCRQLYF Sbjct: 360 GSSRAFKCPYCPAEASAAQCRQLYF 384 >gb|ADE77253.1| unknown [Picea sitchensis] Length = 384 Score = 514 bits (1324), Expect = e-143 Identities = 249/385 (64%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Frame = -2 Query: 1356 MELGSIRDAFDRVAKKQKLSYSKTQEVIDLVGQEIAQALAKLQGVNDPANTDNCQSIVTE 1177 MEL +I+DAFDRV+K+QK SY+KTQ++ID VG+EI AL KL ++ + D +++ E Sbjct: 1 MELNTIKDAFDRVSKRQKTSYTKTQDIIDSVGKEIELALNKLLNASEGSGVDQ-NAVIAE 59 Query: 1176 LNGKLKEAAPLIQLEGSQKELNVGLSKYAKLLEKYFNPDISKAYRNVDFDTHTINQIIAC 997 LN KL E P QL GSQKELNV LSKY K+++K F PDI+KAYR V+FD H IN I+A Sbjct: 60 LNAKLNEIGPTNQLGGSQKELNVALSKYGKVVDKQFYPDIAKAYREVEFDGHIINMIVAL 119 Query: 996 HFYRQGLFDLGDCFMNEAKE-SLVALKSPYMEMYQILEAMKSRNLEPAIEWAATHRDHLV 820 HFYRQGLF+LGDCF++EA E +LK+P++EMY++LE MK+RNL+PA+ WA+ H D LV Sbjct: 120 HFYRQGLFELGDCFISEANEHGAASLKAPFVEMYEMLEQMKARNLQPALAWASAHSDELV 179 Query: 819 QSGSILELKLHRLQFVEILQKGERDNALQYAKTNLSRFATGHMAEFQKLMGGLLWAGKLE 640 + GS LE KLH LQ+++IL++G + +AL +A+++ + FA HM E QKLMG LLW G+LE Sbjct: 180 RKGSALEFKLHALQYMQILERGIQRDALTFARSSFAPFAPLHMEEIQKLMGCLLWTGRLE 239 Query: 639 CSPYPNILSPTHWENLAEELTQQFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 460 SPY +LS +HW+ L+ ELTQ+ C+LLGQSY+SPL+V I AG Q LPTLLKL+NVMA K Sbjct: 240 NSPYSELLSSSHWDALSLELTQECCSLLGQSYKSPLHVTISAGCQALPTLLKLSNVMANK 299 Query: 459 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIVKLSK 280 KQEW M+QLPV ++L REFQFHSIF CPVSRDQ +EENPPMLMPCGHVLCKQSIVKLSK Sbjct: 300 KQEWQTMRQLPVEIELDREFQFHSIFACPVSRDQSTEENPPMLMPCGHVLCKQSIVKLSK 359 Query: 279 SSTRTFKCPYCPLEATVAQCRQLYF 205 S+TRTFKCPYCPLEATVAQCRQLYF Sbjct: 360 SNTRTFKCPYCPLEATVAQCRQLYF 384