BLASTX nr result

ID: Coptis24_contig00004481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004481
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516907.1| conserved hypothetical protein [Ricinus comm...   184   1e-44
ref|XP_002315557.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
ref|XP_002330346.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
ref|XP_002339831.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_003550251.1| PREDICTED: uncharacterized protein LOC100812...   176   3e-42

>ref|XP_002516907.1| conserved hypothetical protein [Ricinus communis]
           gi|223543995|gb|EEF45521.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score =  184 bits (467), Expect = 1e-44
 Identities = 89/111 (80%), Positives = 98/111 (88%), Gaps = 7/111 (6%)
 Frame = -1

Query: 523 MSGVWVFKNGVVRLVENPTTESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALG 365
           MSGVWVFKNGVVRLVENP  ES+DG       RRKVLVH PSNE+ITSYSVLE KLY+LG
Sbjct: 1   MSGVWVFKNGVVRLVENPGAESLDGSRQGSTARRKVLVHTPSNEIITSYSVLEHKLYSLG 60

Query: 364 WERYYDDPDLYQFHKQTSIDLISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 212
           WERYYDDPDL QFHK++++ LISLPKDF+KFKS+HMYDIVVKNRNMFEVRD
Sbjct: 61  WERYYDDPDLLQFHKRSTVHLISLPKDFSKFKSMHMYDIVVKNRNMFEVRD 111


>ref|XP_002315557.1| predicted protein [Populus trichocarpa] gi|222864597|gb|EEF01728.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  184 bits (467), Expect = 1e-44
 Identities = 89/111 (80%), Positives = 98/111 (88%), Gaps = 7/111 (6%)
 Frame = -1

Query: 523 MSGVWVFKNGVVRLVENPTTESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALG 365
           MSGVWVFKNGVVRLVENP  ES+DG       RRKVLVH PSNEVITSY+VLERKLY+LG
Sbjct: 1   MSGVWVFKNGVVRLVENPGAESLDGSRQGSSMRRKVLVHSPSNEVITSYAVLERKLYSLG 60

Query: 364 WERYYDDPDLYQFHKQTSIDLISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 212
           WERYYDDPDL QFHK++++ LISLPKDFNK +S+HMYDIVVKNRNMFEVRD
Sbjct: 61  WERYYDDPDLLQFHKRSTVHLISLPKDFNKLRSMHMYDIVVKNRNMFEVRD 111


>ref|XP_002330346.1| predicted protein [Populus trichocarpa] gi|222871550|gb|EEF08681.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  181 bits (458), Expect = 1e-43
 Identities = 89/111 (80%), Positives = 97/111 (87%), Gaps = 7/111 (6%)
 Frame = -1

Query: 523 MSGVWVFKNGVVRLVENPTTESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALG 365
           MSGVWVFKNGVVRLVENP  ES+DG       RRKVLVH PSNEVITSY+VLERKL +LG
Sbjct: 1   MSGVWVFKNGVVRLVENPGAESLDGSRQGSNTRRKVLVHTPSNEVITSYAVLERKLSSLG 60

Query: 364 WERYYDDPDLYQFHKQTSIDLISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 212
           WERYYDDPDL QFH ++++ LISLPKDFNKFKS+HMYDIVVKNRNMFEVRD
Sbjct: 61  WERYYDDPDLLQFHIRSTVHLISLPKDFNKFKSMHMYDIVVKNRNMFEVRD 111


>ref|XP_002339831.1| predicted protein [Populus trichocarpa] gi|222832325|gb|EEE70802.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score =  177 bits (448), Expect = 2e-42
 Identities = 85/107 (79%), Positives = 94/107 (87%), Gaps = 7/107 (6%)
 Frame = -1

Query: 511 WVFKNGVVRLVENPTTESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALGWERY 353
           WVFKNGVVRLVENP  ES+DG       RRKVLVH PSNEVITSY+VLERKLY+LGWERY
Sbjct: 1   WVFKNGVVRLVENPGAESLDGSRQGSSMRRKVLVHSPSNEVITSYAVLERKLYSLGWERY 60

Query: 352 YDDPDLYQFHKQTSIDLISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 212
           YDDPDL QFHK++++ LISLPKDFNK +S+HMYDIVVKNRNMFEVRD
Sbjct: 61  YDDPDLLQFHKRSTVHLISLPKDFNKLRSMHMYDIVVKNRNMFEVRD 107


>ref|XP_003550251.1| PREDICTED: uncharacterized protein LOC100812106 [Glycine max]
          Length = 109

 Score =  176 bits (446), Expect = 3e-42
 Identities = 84/108 (77%), Positives = 97/108 (89%), Gaps = 4/108 (3%)
 Frame = -1

Query: 523 MSGVWVFKNGVVRLVENPTTESMDG----RRKVLVHKPSNEVITSYSVLERKLYALGWER 356
           MSGVWVFKNGVVRLVENP  E+++G    RRKVLVH+ SNEVITSY+VLERKLY+LGWER
Sbjct: 1   MSGVWVFKNGVVRLVENPGGEAVEGSRGGRRKVLVHRASNEVITSYAVLERKLYSLGWER 60

Query: 355 YYDDPDLYQFHKQTSIDLISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 212
           YYDDPDL QFHK++++ LISLP+DFNKFK +HMYDIVVKN+N FEVRD
Sbjct: 61  YYDDPDLLQFHKRSTVHLISLPRDFNKFKPMHMYDIVVKNKNAFEVRD 108


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