BLASTX nr result

ID: Coptis24_contig00004477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004477
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323151.1| predicted protein [Populus trichocarpa] gi|2...    58   8e-07
ref|XP_002323147.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002522280.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
gb|ABF72026.1| leucine-rich repeat-containing protein kinase fam...    56   3e-06
gb|ABF70100.1| protein kinase, putative [Musa balbisiana]              56   4e-06

>ref|XP_002323151.1| predicted protein [Populus trichocarpa] gi|222867781|gb|EEF04912.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 31/48 (64%), Positives = 36/48 (75%)
 Frame = +2

Query: 23  ADYSVKEASTVLKLAMLCTNLSATLRPTMSQVLSVLKGEKIIEEISAA 166
           + Y  K+A TVL LAM C NLS TLRP MS+V+SVL GEK I+EIS A
Sbjct: 21  SSYDRKQALTVLLLAMKCVNLSPTLRPKMSEVVSVLVGEKRIDEISEA 68


>ref|XP_002323147.1| predicted protein [Populus trichocarpa] gi|222867777|gb|EEF04908.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +2

Query: 23  ADYSVKEASTVLKLAMLCTNLSATLRPTMSQVLSVLKGEKIIEEI 157
           + Y+ K+A TVL LAM C NLS TLRP MS+V+SVL+GEK I+EI
Sbjct: 423 SSYNRKQALTVLLLAMKCVNLSPTLRPKMSEVVSVLEGEKRIDEI 467


>ref|XP_002522280.1| conserved hypothetical protein [Ricinus communis]
           gi|223538533|gb|EEF40138.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 35/42 (83%)
 Frame = +2

Query: 26  DYSVKEASTVLKLAMLCTNLSATLRPTMSQVLSVLKGEKIIE 151
           DYSVK+A+ +L LAMLCTN S TLRPTMS+V+ VL+G+  I+
Sbjct: 72  DYSVKQATIILDLAMLCTNPSPTLRPTMSEVVKVLEGKSKIK 113


>gb|ABF72026.1| leucine-rich repeat-containing protein kinase family protein [Musa
            acuminata]
          Length = 956

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 42/59 (71%)
 Frame = +2

Query: 20   NADYSVKEASTVLKLAMLCTNLSATLRPTMSQVLSVLKGEKIIEEISAAKQLIHTNDLK 196
            ++ +S +EA  +LKLA+LCTN+S TLRP MS V+S+L+G+  IE +S    +   +DL+
Sbjct: 858  DSSFSTEEALQMLKLALLCTNISPTLRPNMSAVVSMLEGKTPIELLSVQSSITKGDDLR 916


>gb|ABF70100.1| protein kinase, putative [Musa balbisiana]
          Length = 1016

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 41/58 (70%)
 Frame = +2

Query: 23   ADYSVKEASTVLKLAMLCTNLSATLRPTMSQVLSVLKGEKIIEEISAAKQLIHTNDLK 196
            + +S +EA  +LKLA+LCTN+S TLRP MS V+S+L+G+  IE +S    +   +DL+
Sbjct: 919  SSFSTEEALQMLKLALLCTNISPTLRPNMSAVVSMLEGKTPIELLSVQSSITKGDDLR 976


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