BLASTX nr result
ID: Coptis24_contig00004473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004473
(2010 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512226.1| transcription factor, putative [Ricinus comm... 383 e-104
ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|2... 376 e-101
ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL... 364 4e-98
emb|CAN72556.1| hypothetical protein VITISV_028885 [Vitis vinifera] 347 9e-93
ref|NP_001236643.1| trihelix transcription factor [Glycine max] ... 330 7e-88
>ref|XP_002512226.1| transcription factor, putative [Ricinus communis]
gi|223548187|gb|EEF49678.1| transcription factor,
putative [Ricinus communis]
Length = 634
Score = 383 bits (984), Expect = e-104
Identities = 260/642 (40%), Positives = 347/642 (54%), Gaps = 69/642 (10%)
Frame = +1
Query: 130 MFNGVPEQFHQFIASRSAXXXXXXXXXXXXFS-----------VHELQPSNQVFQSH--- 267
MF GVP+QFHQFIASR++ S H + + SH
Sbjct: 1 MFEGVPDQFHQFIASRTSSLPLPVSFPPLHGSSTSSNTSFSSFYHPYTTATTITNSHHNQ 60
Query: 268 --------LLHPLHRQHSTH----EDEEKEEDRAVAGSLDIEGMRSASEPMEPWLKEEVL 411
LH LH HS+H E+KEED VA +L+IE RS E ++PW +EVL
Sbjct: 61 QVPLQHPNFLHSLH--HSSHPTGKNHEDKEEDSMVAMNLEIERERSIQESVDPWSNDEVL 118
Query: 412 ALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXXXXXRS 588
ALL IRSS+ F ++ W HVSRKLAELGFKRSAEKCKEKFEE ++ R
Sbjct: 119 ALLRIRSSMENWFPEYTWEHVSRKLAELGFKRSAEKCKEKFEEENRYFNNINYSKNNYRF 178
Query: 589 FNELEALFEDQTHKSVDD--------KMLKSN--EEEKMDVNMEENS-ANETLEN-PVEE 732
F ELE L+ +++ + KM K++ EE+K++ N+EE+S ++T+ N P EE
Sbjct: 179 FGELEELYNGHNNQNPQEAVAAEKNKKMDKASQKEEDKIEQNVEEDSRVDQTVGNYPTEE 238
Query: 733 --NQYVVXXXXXXXXXIYHQLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXX 903
N V + E+ KGF E ++KIM QQEE+H KLLEDM
Sbjct: 239 DNNGKEVEKSKSKKRKRQIKFEMFKGFCEDIISKIMAQQEEMHNKLLEDMVKRDEEKVAR 298
Query: 904 XXGWKKKEMEIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLK------- 1062
WKK+E++ KE+E RAQEQ LA DR++ II FL +F++ +S + ++
Sbjct: 299 EEAWKKQEIDRINKELELRAQEQVLAGDRQTAIINFLKKFSSSSSSSSCSSIEILQHSSA 358
Query: 1063 DEILXXXXXXXXXXXXXNVLAERTCSVSRAIN---PNAPTSNAIILAKASQNQNPTPSQH 1233
++L V+A S+ N P APTS I L Q+ +P ++
Sbjct: 359 HDLLKVPNSSNPSSSSSLVIAHNPNPTSQTNNQSKPEAPTSTRIAL--GHQDSSPAQAKS 416
Query: 1234 NPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXXA-PQNPNS-----------TSNDR 1377
P S + P P + P P+S TSN++
Sbjct: 417 KPAKLTSLQEKQAPQIPSSSSFSIATTQNPKLLNSQSNPLAPSSLSNDILYKKPTTSNNK 476
Query: 1378 EDYGKRWPRDEVNSLINLRCNLQTSVDDKEST--KAPLWERISQGMLELGYKRSAKKCKE 1551
+D GKRWP+DEV +LINLRC+L S +DKE+T KAPLWERISQGMLELGYKRSAK+CKE
Sbjct: 477 DDLGKRWPKDEVLALINLRCSLCNSNEDKEATTVKAPLWERISQGMLELGYKRSAKRCKE 536
Query: 1552 KWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTV 1731
KWENINKYFRKTKD NKKRS+DS+TCPYFHQL+TLYNQG L+ P +A ++
Sbjct: 537 KWENINKYFRKTKDVNKKRSVDSRTCPYFHQLSTLYNQGTLA----APPLEAGKERPQSA 592
Query: 1732 TPETGVGA---CPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 1848
PE + + G S+ + NEG+KN+ QAS ++++
Sbjct: 593 LPENHTASKLNSSLNNGSSNSTLLGNEGEKNLAQASGFDFEF 634
>ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|222858011|gb|EEE95558.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 376 bits (965), Expect = e-101
Identities = 251/636 (39%), Positives = 334/636 (52%), Gaps = 63/636 (9%)
Frame = +1
Query: 130 MFNGVPEQFHQFIASRSAXXXXXXXXXXXX-----------FSVHELQPSNQVFQSHLLH 276
MF GVPEQFHQFIASR+ F + Q +LLH
Sbjct: 1 MFEGVPEQFHQFIASRTTSLPPPGLSFPLLQGSSNTTNFPSFYPYTTSSQQVPLQPNLLH 60
Query: 277 P-LHRQHSTHEDEEKEEDRAVAGSLD-IEGMRSASEPMEPWLKEEVLALLTIRSSLGIEF 450
P LH+ T++D EK+E+ VA ++D E RS E + PW +EVLALL IRSS+ F
Sbjct: 61 PILHQGAPTNKDGEKQENNLVAMNMDQFERERSMPELVNPWSNDEVLALLRIRSSMETWF 120
Query: 451 SDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXXXXXXXR---SFNELEALFED- 618
+F W HVSRKLAE GFKRSAEKCKEKFEE S+ SF+ELE ++
Sbjct: 121 PEFTWEHVSRKLAEAGFKRSAEKCKEKFEEESRYFNISNINYNKNYRASFSELEEIYHGD 180
Query: 619 ----------QTHKSVDDKMLKSNEEEKMDVNMEENSA-NETLENPVEENQY----VVXX 753
+ +K +D + E++KM N+EE + ++T+ N +++ +V
Sbjct: 181 QNPHQEVTAGEKNKKIDKPGTEDEEQDKMRQNLEEETRIDQTVGNQTDQDNNGKLALVEK 240
Query: 754 XXXXXXXIYHQLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXXGWKKKEM 930
+ E+ K E VN +M QQEE+H KLLED+ KK EM
Sbjct: 241 SKSNKRKREKKFEMFKRLCEDIVNTMMAQQEEMHNKLLEDIVKRDEEKVAKEEARKKLEM 300
Query: 931 EIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLKDEILXXXXXXXXXXXX 1110
+ KE+E RA EQALA DR++ +I FL +FT+ S + +L ++I
Sbjct: 301 DRINKELELRAHEQALANDRQATLIRFLKKFTSSDSSVE--ILGEKIAPDPVNVPNSS-- 356
Query: 1111 XNVLAERTCSVSRAINPNAPTSNAIILAKASQNQNPTPSQHNP----KLPNSRILEHPPH 1278
N + + + + NP + TSN L A+ + Q + K S P
Sbjct: 357 -NASSSSSLVLEQNPNPASQTSNESQLKTATSSATALDHQKSTSILAKTNTSWTENQEPQ 415
Query: 1279 NPXXXXXXXXXXXXXXXXXXX---APQNPN----------------------STSNDRED 1383
NP APQNPN + S ++D
Sbjct: 416 NPTSTLARNIPQVPTTSSTLAVPAAPQNPNFLNSHSSTSGPPNTLPSHNKVQAKSTYKDD 475
Query: 1384 YGKRWPRDEVNSLINLRCNLQTSVDDKE-STKAPLWERISQGMLELGYKRSAKKCKEKWE 1560
GKRWPRDEV +LINLRC+L + +DKE S +APLWERISQGMLE GYKRSAK+CKEKWE
Sbjct: 476 IGKRWPRDEVLALINLRCSLYNNNEDKEGSARAPLWERISQGMLESGYKRSAKRCKEKWE 535
Query: 1561 NINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTVTPE 1740
NINKYFRKTKD NKKRS+DS+TCPYFHQL+TLYNQG L P+N++ S E R+ PE
Sbjct: 536 NINKYFRKTKDVNKKRSIDSRTCPYFHQLSTLYNQGTL----VAPDNRSASPENRSSLPE 591
Query: 1741 TGVGACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 1848
T + Q+ G S+ +HV +G+KNMVQ P ++++
Sbjct: 592 TRHSSSSQN-GTSNSTLHVGDGEKNMVQVPPLDFEF 626
>ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL2-like [Vitis vinifera]
Length = 615
Score = 364 bits (935), Expect = 4e-98
Identities = 254/649 (39%), Positives = 336/649 (51%), Gaps = 76/649 (11%)
Frame = +1
Query: 130 MFNGVP-EQFHQFIASRSAXXXXXXXXXXXX------FSVH---------ELQPS----- 246
MF+GVP +QFHQF+A+ +A F +H +L PS
Sbjct: 1 MFDGVPSDQFHQFVAAAAAAAASSTTSQLQPPPPSLSFPLHVSSSTFPSFDLYPSGSGGG 60
Query: 247 -------NQVFQ-SHLLHPLHRQHST--HEDEEKEEDRAVAGSLDIEGMRSASEPMEPWL 396
+Q Q HLLHPLH S +D++KEE+ V+ +L+ + RS + + PW
Sbjct: 61 GGAAAAAHQPLQVPHLLHPLHHHSSAPHKDDQDKEENALVSINLEPQKERSMLDLINPWS 120
Query: 397 KEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXX 573
+EVLALL IRSS+ + DF W HVSRKLAE GFKRSAEKCKEKFE+ S+
Sbjct: 121 NDEVLALLRIRSSMENWYPDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTMNYS 180
Query: 574 XXXRSFNELEALFEDQTHKSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPVEEN 735
R F+ELE L+ ++ D K+++ EE D ++EE+S NET + NP E
Sbjct: 181 KNYRFFSELEELYHGESPHQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPCLET 238
Query: 736 QYVVXXXXXXXXXIYHQ---LELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXX 903
+ V + Q E+ KGF E V+K+M QQEE+H KLLEDM
Sbjct: 239 EKVEDKSKGKKRKRHTQNKSFEMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAR 298
Query: 904 XXGWKKKEMEIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGT-------SPTQGLLLK 1062
WKK+EM+ KE+E R EQA+A DR++ II FL +FT+ +G L K
Sbjct: 299 EEAWKKQEMDRINKEIEIREHEQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSK 358
Query: 1063 -----------DEILXXXXXXXXXXXXXN-------------VLAERTCSVSRAINPNAP 1170
IL N V + CS++ NPNAP
Sbjct: 359 VPSRSNPPTSPSSILPQNPNPTSHLSPQNKQLEAPTSSRKVIVPHQNPCSLTTPTNPNAP 418
Query: 1171 TSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXXAPQ 1350
+ +A +QNPT + PNS + P P
Sbjct: 419 ------IDEAQPSQNPTSMVLESQNPNSLNTQKRPSAPTSF------------------- 453
Query: 1351 NPNSTSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKR 1530
P+ T + ++ GKRWPRDEV +LINLRC+L +V+DKE K PLWERISQGML LGYKR
Sbjct: 454 -PSITDHRDQELGKRWPRDEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKR 510
Query: 1531 SAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE---GPEN 1701
SAK+CKEKWENINKYFRKTKD +KKRSLDS+TCPYFHQL+TLY+QG L +PS PEN
Sbjct: 511 SAKRCKEKWENINKYFRKTKDVSKKRSLDSRTCPYFHQLSTLYSQGTLVVPSSEAPAPEN 570
Query: 1702 QAHSAEIRTVTPETGVGACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 1848
+S+E + PE VG + +EG++N Q ++++
Sbjct: 571 CLNSSENHSSLPENQVGGSSSNTNMH----AADEGEENAAQLPAYDFKF 615
>emb|CAN72556.1| hypothetical protein VITISV_028885 [Vitis vinifera]
Length = 569
Score = 347 bits (889), Expect = 9e-93
Identities = 235/574 (40%), Positives = 305/574 (53%), Gaps = 55/574 (9%)
Frame = +1
Query: 130 MFNGVP-EQFHQFIASRSAXXXXXXXXXXXXFSVHELQPSNQVFQSHLLHPLHRQHSTH- 303
MF+GVP +QFHQF+A+ +A + +LQP L PLH ST
Sbjct: 1 MFDGVPSDQFHQFVAAAAAAAASS--------TTSQLQPP----PPSLSFPLHVSSSTFP 48
Query: 304 -----------EDEEKEEDRAVAGSLDIEGMRSASEPMEPWLKEEVLALLTIRSSLGIEF 450
+D++KEE+ V+ +L+ + RS + + PW +EVLALL IRSS+ +
Sbjct: 49 SFDLYPSGGGGDDQDKEENALVSINLEPQKERSMLDLINPWSNDEVLALLRIRSSMENWY 108
Query: 451 SDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXXXXXRSFNELEALFEDQTH 627
DF W HVSRKLAE GFKRSAEKCKEKFE+ S+ R F+ELE L+ ++
Sbjct: 109 PDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTMNYSKNYRFFSELEELYHGESP 168
Query: 628 KSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPVEENQYVVXXXXXXXXXIYHQ- 786
D K+++ EE D ++EE+S NET + NP E + V + Q
Sbjct: 169 HQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPCLETEKVEDKSKGKKRKRHTQN 226
Query: 787 --LELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXXGWKKKEMEIFYKEMEF 957
E+ KGF E V+K+M QQEE+H KLLEDM WKK+EM+ KE+E
Sbjct: 227 KSFEMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAREEAWKKQEMDRINKEIEI 286
Query: 958 RAQEQALACDRESKIIEFLNQFTTGT-------SPTQGLLLK-----------DEILXXX 1083
R EQA+A DR++ II FL +FT+ +G L K IL
Sbjct: 287 REHEQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSKVPSRSNPPTSTSSILPQN 346
Query: 1084 XXXXXXXXXXN-------------VLAERTCSVSRAINPNAPTSNAIILAKASQNQNPTP 1224
N V + CS++ NPNAP + +A +QNPT
Sbjct: 347 PNPTSHLSPQNKQLEAPTSSRKVIVPHQNPCSLTTPTNPNAP------IDEAQPSQNPTS 400
Query: 1225 SQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXXAPQNPNSTSNDREDYGKRWPR 1404
+ PNS + P P P+ T + ++ GKRWPR
Sbjct: 401 MVLESQNPNSLNTQKSPSAPSSF--------------------PSITDHRDQELGKRWPR 440
Query: 1405 DEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKYFRK 1584
DEV +LINLRC+L +V+DKE K PLWERISQGML LGYKRSAK+CKEKWENINKYFRK
Sbjct: 441 DEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKRSAKRCKEKWENINKYFRK 498
Query: 1585 TKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPS 1686
TKD +KKRSLDS+TCPYFHQL+TLY+QG L +PS
Sbjct: 499 TKDVSKKRSLDSRTCPYFHQLSTLYSQGTLVVPS 532
>ref|NP_001236643.1| trihelix transcription factor [Glycine max]
gi|146674837|gb|ABQ42350.1| trihelix transcription factor
[Glycine max]
Length = 581
Score = 330 bits (847), Expect = 7e-88
Identities = 218/565 (38%), Positives = 291/565 (51%), Gaps = 41/565 (7%)
Frame = +1
Query: 130 MFNGVPEQFHQFIASRSAXXXXXXXXXXXXFSVHELQPSN-----------QVFQSHLLH 276
MF+GVP+QFHQFI R++ + + PSN + ++LLH
Sbjct: 1 MFDGVPDQFHQFITPRTSQPLHLPFPLHASGTPNTTFPSNFDPYNNPSHQLPLQPNNLLH 60
Query: 277 PLHRQHSTHEDEEKEEDRAVAG---SLDIEGMRSASEPMEPWLKEEVLALLTIRSSLGIE 447
PLH H+DEEKEE+ + + + E ++PW +EVL LL IRSS+
Sbjct: 61 PLH-----HKDEEKEENTTTVPMNFEIQRDQRQQLPELIDPWTTDEVLTLLRIRSSMESW 115
Query: 448 FSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXXXXXXX--------RSFNELE 603
F + W HVSR+LAELG+KRSAEKCKEKFEE S+ R +ELE
Sbjct: 116 FPELTWEHVSRRLAELGYKRSAEKCKEKFEEESRYFNNDINYAKNNNNSTSNYRFLSELE 175
Query: 604 ALFE------DQTHKSVDDKMLKSNEEEKMDVNMEE---NSANETLENPV-----EENQY 741
L+ D K + K + + +EE +S N ++ V +E
Sbjct: 176 QLYHQQGSSGDHLEKMTQPPLQKQGRMDHHALELEEEEGDSRNVIVDASVTKIQSDEALA 235
Query: 742 VVXXXXXXXXXIYHQLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXXGWK 918
V + E+ KGF E V+K+M QQEE+H KLLEDM WK
Sbjct: 236 VEKITKDRKRKRSDRFEMFKGFCESIVHKMMTQQEEMHNKLLEDMMKRDEEKFTREEAWK 295
Query: 919 KKEMEIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLKDEILXXXXXXXX 1098
K+EME KE+E A+EQA+A DR++KII+ LN+F+ TS LK
Sbjct: 296 KQEMEKMNKELEMMAREQAVAGDRQAKIIQILNKFSATTSSPASHTLKK----------- 344
Query: 1099 XXXXXNVLAERTCSVSRAINPNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPH 1278
N + + S+ NP + ++ S P P+ P+ P+S L +
Sbjct: 345 ----VNTHISQNPNPSQTENPTLSVAQDTLIPSTSSTSTPAPAP--PQNPSSCSLNSQNN 398
Query: 1279 NPXXXXXXXXXXXXXXXXXXXAPQNPNSTSNDREDYGKRWPRDEVNSLINLRC---NLQT 1449
N N S+SN+++D G+RWP+DEV +LINLRC N
Sbjct: 399 NHINNNIPVEKNSIL---------NKGSSSNEKDDVGRRWPKDEVLALINLRCTSVNNNN 449
Query: 1450 SVDDKE-STKAPLWERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKT 1626
+ ++KE + K PLWERISQGM EL YKRSAK+CKEKWENINKYFRKTKD KKRSLDS+T
Sbjct: 450 NNEEKEGNNKVPLWERISQGMSELRYKRSAKRCKEKWENINKYFRKTKDITKKRSLDSRT 509
Query: 1627 CPYFHQLNTLYNQGRLSMPSEGPEN 1701
CPYFHQL++LYNQG+L + SE N
Sbjct: 510 CPYFHQLSSLYNQGKLVLQSESHLN 534