BLASTX nr result
ID: Coptis24_contig00004466
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004466
(3934 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36172.3| unnamed protein product [Vitis vinifera] 498 e-138
ref|XP_002280072.1| PREDICTED: uncharacterized protein LOC100256... 466 e-128
ref|XP_002528177.1| conserved hypothetical protein [Ricinus comm... 432 e-118
ref|XP_002303278.1| predicted protein [Populus trichocarpa] gi|2... 381 e-103
ref|XP_002298138.1| predicted protein [Populus trichocarpa] gi|2... 378 e-102
>emb|CBI36172.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 498 bits (1282), Expect = e-138
Identities = 294/587 (50%), Positives = 354/587 (60%), Gaps = 34/587 (5%)
Frame = +3
Query: 1704 VGGDDEKRSNXXXXXXXXXXXXXXXXXXXPFAVPTAGAFYMHDDRFRENXXXXXXXXXXX 1883
VGG++EK+ N PFAVPTAGAFYMHDDRFR+N
Sbjct: 68 VGGEEEKKENE------------------PFAVPTAGAFYMHDDRFRDNAGGRHRRTLGG 109
Query: 1884 XKLWESKDVRKWGHDKYIEMNSQERENEKDXXXXXXXXXXXXXXXXXXXXXXXXNRPRAY 2063
KLWESKD RKWGHDK+ EM QER E+ NR +AY
Sbjct: 110 RKLWESKDDRKWGHDKFEEMTMQERHYEEGRRNSKGHYHARGKNRGADRGYGRGNRSKAY 169
Query: 2064 DDRNN-------------------QNQXXXXXXXXXXXXYEPLARNNRETPTQNKQSGKS 2186
++ NN QNQ YEP AR ETPTQNKQSGKS
Sbjct: 170 NNHNNSNNNNNVSSNNNNSNSSSNQNQVPRSVRGRGPRRYEPPARYKSETPTQNKQSGKS 229
Query: 2187 HESPSNTTSGRVSTSARSSNVQSDSAPSGKHVFASSLNSASPPFYPSGSSNHETSQTQKR 2366
E S+++SGR T +SNV SD P+ KHVFASSL+SASPPFYPSGSSN E S TQKR
Sbjct: 230 FEKASHSSSGRAFTP--TSNVASDPIPTRKHVFASSLSSASPPFYPSGSSNKEISLTQKR 287
Query: 2367 ELPGGNSNKSLRPSVTSEN--RTHSTTFVRGKNVADVA--DRVYFDDDLAPQEYMGK-FN 2531
+L G +N+++RPSV E+ + S RGKN+ D D++Y DD L+P GK N
Sbjct: 288 DLHTGTTNRNIRPSVAEESFGTSQSGALPRGKNIVDSVGMDKLYIDDSLSP--VAGKSLN 345
Query: 2532 NMQLQSSG-SLPKFAQSPQIKSNKGRGLATPEKLHYQPLAPINQVSRTHAP----TVHQR 2696
N+QL SSG SL QSPQ+++ +GRGLA ++++QP NQ++R P V +
Sbjct: 346 NLQLPSSGSSLITTTQSPQVRA-QGRGLAPSGQMNFQPTLSHNQLNRAAPPAQLHAVQRS 404
Query: 2697 PGQNTVQTSFRASSQQLGQHL-TGSQ-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVG 2870
P Q VQ S ++SSQQLGQ +GSQ + ALVG
Sbjct: 405 PVQARVQPSLQSSSQQLGQRPGSGSQTSSPPKNALSINSFEHGDMDSPPESSKSKTALVG 464
Query: 2871 KGKGTVQGNGRGSFLYNGAQVMGASGSMGLSHGDQNFP-APALLQVMQFGGQHPGGMGVP 3047
KGKG+VQG+GRGSFLYNGAQVMGA+G+MG+ HGDQNFP PA L VMQFGGQHPGG+GVP
Sbjct: 465 KGKGSVQGSGRGSFLYNGAQVMGATGNMGVGHGDQNFPGTPAFLPVMQFGGQHPGGIGVP 524
Query: 3048 AVGMALPGYVAQP--GFGNSEMTWVPVXXXXXXXXXXSYCSPYLTVDGGYYGRPTGQTSS 3221
AVGMA PGYVA P G GNSEMTW+PV +YC PY+ VDG Y+ RP+GQTSS
Sbjct: 525 AVGMAFPGYVANPQLGLGNSEMTWLPVLAGAAGALGATYCPPYIAVDGAYHARPSGQTSS 584
Query: 3222 SAASSKELITNKPNDVLKPSQRSELVNDEFGQRQNKPRRYSEMNFGQ 3362
+ +S+KE ++KP+ KPSQR ELV+DEFGQRQNKPRRYSEMNFGQ
Sbjct: 585 AGSSNKENSSSKPSSEWKPSQRPELVSDEFGQRQNKPRRYSEMNFGQ 631
>ref|XP_002280072.1| PREDICTED: uncharacterized protein LOC100256571 [Vitis vinifera]
Length = 676
Score = 466 bits (1199), Expect = e-128
Identities = 282/583 (48%), Positives = 335/583 (57%), Gaps = 30/583 (5%)
Frame = +3
Query: 1704 VGGDDEKRSNXXXXXXXXXXXXXXXXXXXPFAVPTAGAFYMHDDRFRENXXXXXXXXXXX 1883
VGG++EK+ N PFAVPTAGAFYMHDDRFR+N
Sbjct: 147 VGGEEEKKENE------------------PFAVPTAGAFYMHDDRFRDNAGGRHRRTLGG 188
Query: 1884 XKLWESKDVRKWGHDKYIEMNSQERENEKDXXXXXXXXXXXXXXXXXXXXXXXXNRPRAY 2063
KLWESKD RKWGHDK+ EM QER E+ NR +AY
Sbjct: 189 RKLWESKDDRKWGHDKFEEMTMQERHYEEGRRNSKGHYHARGKNRGADRGYGRGNRSKAY 248
Query: 2064 DDRNN-------------------QNQXXXXXXXXXXXXYEPLARNNRETPTQNKQSGKS 2186
++ NN QNQ YEP AR ETPTQNKQSGKS
Sbjct: 249 NNHNNSNNNNNVSSNNNNSNSSSNQNQVPRSVRGRGPRRYEPPARYKSETPTQNKQSGKS 308
Query: 2187 HESPSNTTSGRVSTSARSSNVQSDSAPSGKHVFASSLNSASPPFYPSGSSNHETSQTQKR 2366
E S+++SGR T +SNV SD P+ KHVFASSL+SASPPFYPSGSSN E S TQKR
Sbjct: 309 FEKASHSSSGRAFTP--TSNVASDPIPTRKHVFASSLSSASPPFYPSGSSNKEISLTQKR 366
Query: 2367 ELPGGNSNKSLRPSVTSENRTHSTTFVRGKNVADVADRVYFDDDLAPQEYMGK-FNNMQL 2543
+L G D++Y DD L+P GK NN+QL
Sbjct: 367 DLQVG------------------------------MDKLYIDDSLSP--VAGKSLNNLQL 394
Query: 2544 QSSGS-LPKFAQSPQIKSNKGRGLATPEKLHYQPLAPINQVSRTHAPT----VHQRPGQN 2708
SSGS L QSPQ+++ +GRGLA ++++QP NQ++R P V + P Q
Sbjct: 395 PSSGSSLITTTQSPQVRA-QGRGLAPSGQMNFQPTLSHNQLNRAAPPAQLHAVQRSPVQA 453
Query: 2709 TVQTSFRASSQQLGQHL-TGSQ-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVGKGKG 2882
VQ S ++SSQQLGQ +GSQ + ALVGKGKG
Sbjct: 454 RVQPSLQSSSQQLGQRPGSGSQTSSPPKNALSINSFEHGDMDSPPESSKSKTALVGKGKG 513
Query: 2883 TVQGNGRGSFLYNGAQVMGASGSMGLSHGDQNFPA-PALLQVMQFGGQHPGGMGVPAVGM 3059
+VQG+GRGSFLYNGAQVMGA+G+MG+ HGDQNFP PA L VMQFGGQHPGG+GVPAVGM
Sbjct: 514 SVQGSGRGSFLYNGAQVMGATGNMGVGHGDQNFPGTPAFLPVMQFGGQHPGGIGVPAVGM 573
Query: 3060 ALPGYVAQP--GFGNSEMTWVPVXXXXXXXXXXSYCSPYLTVDGGYYGRPTGQTSSSAAS 3233
A PGYVA P G GNSEMTW+PV +YC PY+ VDG Y+ RP+GQTSS+ +S
Sbjct: 574 AFPGYVANPQLGLGNSEMTWLPVLAGAAGALGATYCPPYIAVDGAYHARPSGQTSSAGSS 633
Query: 3234 SKELITNKPNDVLKPSQRSELVNDEFGQRQNKPRRYSEMNFGQ 3362
+KE ++KP+ KPSQR ELV+DEFGQRQNKPRRYSEMNFGQ
Sbjct: 634 NKENSSSKPSSEWKPSQRPELVSDEFGQRQNKPRRYSEMNFGQ 676
>ref|XP_002528177.1| conserved hypothetical protein [Ricinus communis]
gi|223532389|gb|EEF34184.1| conserved hypothetical
protein [Ricinus communis]
Length = 683
Score = 432 bits (1112), Expect = e-118
Identities = 264/543 (48%), Positives = 332/543 (61%), Gaps = 19/543 (3%)
Frame = +3
Query: 1791 PFAVPTAGAFYMHDDRFRENXXXXXXXXXXXXKLWESKDVRKWGHDKYIEMNSQERENEK 1970
PFAVPTAGAFYMHDDRFR+N KLWESKD +KWGHDK+ EMN QER ++
Sbjct: 144 PFAVPTAGAFYMHDDRFRDNAGGRHRRTYGGRKLWESKDDKKWGHDKFEEMNLQERHYDQ 203
Query: 1971 DXXXXXXXXXXXXXXXXXXXXXXXX-NRPRAYDDRNNQNQXXXXXXXXXXXXYEPL-ARN 2144
+R +A+ + NNQNQ YEP R+
Sbjct: 204 GRRGSKGHYQARGGKNQGPDRGYARRSRSKAFSNGNNQNQAPKGVRGRGPRKYEPRWKRS 263
Query: 2145 NRETP--TQNKQSGKSHESPSNTTSGRVSTSARSSNVQSDSAPSGKHVFASSLNSASPPF 2318
++ P TQNKQ+ KS E S+ +SGRV T A SN +SD P + SSL+SASPPF
Sbjct: 264 SQSQPPLTQNKQAEKSFEKTSHGSSGRVFTPA--SNTESDQVPPARK--NSSLSSASPPF 319
Query: 2319 YPSGSSNHETSQTQKRELPGGNSNKSLRPSVTSENRT--HSTTFVRGKNVADV--ADRVY 2486
YPSGSSN + + TQKR++ G+++++ SV E+ + ++ +RGKN+AD D++Y
Sbjct: 320 YPSGSSNKDVTLTQKRDVQVGSTSRNPPTSVVDESFSMQQASALMRGKNIADSIGVDKLY 379
Query: 2487 FDDDLAPQEYMGK-FNNMQLQSSGS-LPKFAQSPQIKSNKGRGLATPEKLHYQPLAPINQ 2660
DD + GK N+MQ+Q SGS L QS Q ++ +GRG+A ++ YQ NQ
Sbjct: 380 IDDSV--NSTAGKPLNSMQMQPSGSSLANTMQSSQSRA-QGRGVAISGQMTYQSNPLQNQ 436
Query: 2661 VSRTHAPT----VHQRPGQNTVQTSFRASSQQLGQHL-TGSQAXXXXXXXXXXXXXXXXX 2825
V+R + T V + P QN VQ S +A QLGQ +GSQA
Sbjct: 437 VNRVSSATQPHPVQRNPAQNRVQPSVQAPGLQLGQRSGSGSQASSPPNTALSINSYEPGD 496
Query: 2826 XXXXXXXXXXX-ALVGKGKGTVQGNGRGSFLYNGAQVMGASGSMGLSHGDQNFP-APALL 2999
ALVGKGKG++QG+GRGSF+Y GAQVMGA+G+M + HGDQNFP APA L
Sbjct: 497 AENSSESSKSRGALVGKGKGSIQGSGRGSFMYGGAQVMGATGNMNVGHGDQNFPGAPAFL 556
Query: 3000 QVMQFGGQHPGGMGVPAVGMALPGYVAQP--GFGNSEMTWVPVXXXXXXXXXXSYCSPYL 3173
VMQFGGQHPGG+GVPAVGMA PGYVAQP G GNSEMTW+PV +YCSPY+
Sbjct: 557 PVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGLGNSEMTWLPVLAGAAGALGATYCSPYI 616
Query: 3174 TVDGGYYGRPTGQTSSSAASSKELITNKPNDVLKPSQRSELVNDEFGQRQNKPRRYSEMN 3353
VDG Y+ RP+GQTSSS +SSKE TNK ++ KPSQ+ E+VNDEFGQRQ KPRRYSEM+
Sbjct: 617 AVDGAYHARPSGQTSSSGSSSKENSTNKSSNEWKPSQKPEIVNDEFGQRQ-KPRRYSEMD 675
Query: 3354 FGQ 3362
F Q
Sbjct: 676 FKQ 678
>ref|XP_002303278.1| predicted protein [Populus trichocarpa] gi|222840710|gb|EEE78257.1|
predicted protein [Populus trichocarpa]
Length = 656
Score = 381 bits (979), Expect = e-103
Identities = 232/516 (44%), Positives = 296/516 (57%), Gaps = 17/516 (3%)
Frame = +3
Query: 1791 PFAVPTAGAFYMHDDRFRENXXXXXXXXXXXXKLWESKDVRKWGHDKYIEMNSQERENEK 1970
PFAVPTAGAFYMHDDRFR++ LWESKD +KWGHDK+ EM SQER E+
Sbjct: 147 PFAVPTAGAFYMHDDRFRDSAGGRHRRTFGGRNLWESKDDKKWGHDKFEEMTSQERHYEQ 206
Query: 1971 D-XXXXXXXXXXXXXXXXXXXXXXXXNRPRAYDDRNNQNQXXXXXXXXXXXXYEPLARNN 2147
NR ++ D NNQNQ +E ++
Sbjct: 207 GRRTAKGNFRARGGKSRGPEWGYARRNRSNSFSDGNNQNQAPKVVRGRGPRKFESTFKSR 266
Query: 2148 RET-PTQNKQSGKSHESPSNTTSGRVSTSARSSNVQSDSAPSGKHVFASSLNSASPPFYP 2324
RET P QNKQ GK E S+ +SGR+ TS SN +SD P+ KH SSL+SASPPFYP
Sbjct: 267 RETPPVQNKQPGKPLEKRSHGSSGRILTSL--SNTESDELPTRKH---SSLSSASPPFYP 321
Query: 2325 SGSSNHETSQTQKRELPGGNSNKSLRPSVTSEN---RTHSTTFVRGKNVADVA--DRVYF 2489
SGSSN + + +QKR++ G +++K+LR V EN + HS VRGKN+AD D++Y
Sbjct: 322 SGSSNKDITSSQKRDIHGASTSKNLRTPVIDENFPMQQHS-ALVRGKNIADSVSIDKLYI 380
Query: 2490 DDDLAPQEYMGK-FNNMQLQSSGSLPKFAQSPQIKSNKGRGLATPEKLHYQPLAPINQVS 2666
DD + P GK +NMQ+ SGS + + +GR A ++ YQ NQ++
Sbjct: 381 DDSITPA--AGKPLSNMQMPPSGSSVVNSITSSQSRAQGRSAAMSSQMTYQGAPQQNQIN 438
Query: 2667 RTH--AP--TVHQRPGQNTVQTSFRASSQQLGQHLTGSQ--AXXXXXXXXXXXXXXXXXX 2828
+T AP ++ + P QN +Q S+QQL QH + +
Sbjct: 439 KTSPTAPIHSLQRIPAQNRIQ----PSAQQLVQHPSSDSPASSPPKTALSQNSYEAVEAE 494
Query: 2829 XXXXXXXXXXALVGKGKGTVQGNGRGSFLYNGAQVMGASGSMGLSHGDQNFP-APALLQV 3005
ALVGKGKG +QGNGRGSFLY G QV+GA+G++ + HGDQNF P L V
Sbjct: 495 AAVESSKSRNALVGKGKGIIQGNGRGSFLYGGTQVVGATGNISVGHGDQNFSGTPTFLPV 554
Query: 3006 MQFGGQHPGGMGVPAVGMALPGYVAQP--GFGNSEMTWVPVXXXXXXXXXXSYCSPYLTV 3179
MQFGGQHPGG+GVPAVGMA PGYVAQP G GNSEMTW+PV +YCSPY++V
Sbjct: 555 MQFGGQHPGGLGVPAVGMAFPGYVAQPQLGLGNSEMTWLPVLAGAAGALGATYCSPYISV 614
Query: 3180 DGGYYGRPTGQTSSSAASSKELITNKPNDVLKPSQR 3287
DG Y+ RP+G+TSS +SSKE TN PN+ K +QR
Sbjct: 615 DGAYHARPSGKTSSLGSSSKESSTNIPNNEWKNTQR 650
>ref|XP_002298138.1| predicted protein [Populus trichocarpa] gi|222845396|gb|EEE82943.1|
predicted protein [Populus trichocarpa]
Length = 687
Score = 378 bits (970), Expect = e-102
Identities = 244/539 (45%), Positives = 305/539 (56%), Gaps = 23/539 (4%)
Frame = +3
Query: 1791 PFAVPTAGAFYMHDDRFRENXXXXXXXXXXXXKLWESKDVRKWGHDKYIEMNSQERENEK 1970
PFAVPTAGAFYMHDDRFR++ KLWESKD +KWGHDK+ EM QER E+
Sbjct: 151 PFAVPTAGAFYMHDDRFRDSAGGRHRRTLGRRKLWESKDNKKWGHDKFEEMTLQERHYEQ 210
Query: 1971 DXXXXXXXXXXXXXXXXXXXXXXXX-NRPRAYDDRNNQNQXXXXXXXXXXXXYEPLARNN 2147
NR +++ D NNQNQ E ++
Sbjct: 211 GRRNAKGNFHARGGKNRGPEQGYARRNRSQSFSDGNNQNQAPKAVRGRGPRKGESTFKSR 270
Query: 2148 RETP-TQNKQSGKSHESPSNTTSGRVSTSARSSNVQSDSAPSGKHVFASSLNSASPPFYP 2324
RETP Q+KQ GK E S+ +SGRV SA SN +S P+ + S+L+SASPPFYP
Sbjct: 271 RETPPVQSKQPGKPLEKHSHGSSGRVLISA--SNTESHQVPTARK--NSNLSSASPPFYP 326
Query: 2325 SGSSNHETSQTQKRELPGGNSNKSLRPSVTSENRTHSTTF--VRGKNVAD--VADRVYFD 2492
SGSS+ + + QKR++ +++K+ R V EN T VRGKN+AD D++Y D
Sbjct: 327 SGSSSKDITLGQKRDVHSASTSKNHRTPVIDENFPMQQTIALVRGKNIADSVAIDKLYID 386
Query: 2493 DDLAPQEYMGK-FNNMQLQSS-GSLPKFAQSPQIKSNKGRGLATPEKLHYQPLAPINQVS 2666
D + P GK NNMQ S S+ QS Q ++ +GRG+A + YQ N +
Sbjct: 387 DSITPA---GKPLNNMQTPPSVSSVVSTIQSSQSRA-QGRGVAMSSQRSYQGSPQHNLTN 442
Query: 2667 RTHAPT-VHQR---PGQNTVQTSFR------ASSQQLGQHL-TGSQAXXXXXXXXXXXXX 2813
RT T +H R P QN +Q + A +Q L QH +GSQA
Sbjct: 443 RTSPTTPLHSRQRSPAQNRIQPAPAQNRIQPAPAQPLVQHPGSGSQASSPPKTALSLNSY 502
Query: 2814 XXXXXXXXXXXXXXX-ALVGKGKGTVQGNGRGSFLYNGAQVMGASGSMGLSHGDQNFPA- 2987
ALVGKGKG +QGNGRGSFLY GA+V+GA+ +MG+ HGDQN P
Sbjct: 503 EAGEAETAVESSKSRTALVGKGKGIIQGNGRGSFLYGGAEVVGATRNMGVGHGDQNLPGT 562
Query: 2988 PALLQVMQFGGQHPGGMGVPAVGMALPGYVAQP--GFGNSEMTWVPVXXXXXXXXXXSYC 3161
P L VMQFG QHPGG+GVPAVGMA PGYVAQP G GNSEMTW+PV +YC
Sbjct: 563 PTFLPVMQFGSQHPGGIGVPAVGMAFPGYVAQPQLGLGNSEMTWLPVLTGAAGALGATYC 622
Query: 3162 SPYLTVDGGYYGRPTGQTSSSAASSKELITNKPNDVLKPSQRSELVNDEFGQRQNKPRR 3338
SPYLTVDG Y+GRP+ Q S +SS+E +N P++ KP+QR EL +DEFGQRQ KPRR
Sbjct: 623 SPYLTVDGAYHGRPSRQASCLGSSSEESSSNVPDNEWKPTQRPELASDEFGQRQ-KPRR 680