BLASTX nr result

ID: Coptis24_contig00004463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004463
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516832.1| conserved hypothetical protein [Ricinus comm...   410   e-112
ref|XP_002314437.1| predicted protein [Populus trichocarpa] gi|2...   379   e-102
ref|XP_003609552.1| hypothetical protein MTR_4g118510 [Medicago ...   366   8e-99
ref|XP_003546113.1| PREDICTED: uncharacterized protein LOC100776...   363   5e-98
ref|XP_002278619.2| PREDICTED: uncharacterized protein LOC100252...   363   7e-98

>ref|XP_002516832.1| conserved hypothetical protein [Ricinus communis]
            gi|223543920|gb|EEF45446.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 338

 Score =  410 bits (1053), Expect = e-112
 Identities = 227/346 (65%), Positives = 258/346 (74%)
 Frame = +2

Query: 83   MLAKESSVSNKFDLPEEVLTILPSDPFEQLDIARKITSIALATRVSKLESESSHLRSQLT 262
            MLAKES  S  FDLPEEVL +LPSDPFEQLD+ARKITSIAL+TRVS LESE S LR QL 
Sbjct: 1    MLAKESGGST-FDLPEEVLQVLPSDPFEQLDVARKITSIALSTRVSSLESEFSALRLQLA 59

Query: 263  EKEDQLTELQSQIDSLDASLNETLDKLAHADEEKERLLKENASLSVTVKKLNRDVSKLEI 442
            EK+  + ELQS I+SLDASL+++ DKLA AD EKE LLKENASLS  VKKL RDVSKLE+
Sbjct: 60   EKDHLIAELQSHIESLDASLSDSADKLAQADAEKENLLKENASLSNIVKKLQRDVSKLEV 119

Query: 443  FRKTLVQSLQEEEDTAQGGVSQVLKKHIQNNPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 622
            FRKTL++SLQ++E+++ G +  + K      P                            
Sbjct: 120  FRKTLMKSLQDDEESSSGAIPIIAK------PTPTEDDASMLPSRTSSMRSQFSEMGNSF 173

Query: 623  XXXXXXXXGYRHGTSQGPLLASYSSTPRLTPPVSPPSLSAAGSPTRRSKPGSPRRHSISF 802
                      R G S GPLLAS +STPR TPP SPPS SA+ SPTR SKP SPRRHS+SF
Sbjct: 174  AEDREIDASSRPGMSHGPLLASQTSTPRFTPPGSPPSFSASVSPTRTSKPVSPRRHSMSF 233

Query: 803  ANSRGVFDERSSGFSSIPSSQHGSLSSSFDMGSQTGRTRVDGKEFFRQVRSRLSYEQFGA 982
            + SRG+ D+RSS FSSIPSSQH S+SSS + GS TGRTRVDGKEFFRQVRSRLSYEQFGA
Sbjct: 234  STSRGMPDDRSSLFSSIPSSQHSSISSS-ETGSHTGRTRVDGKEFFRQVRSRLSYEQFGA 292

Query: 983  FLANVKELNSHKQNREETLRKADEIFGPDNKDLYVVFEGLITRNVH 1120
            FLANVKELNSHKQ +E+TLRKA+EIFGPDNKDLYV+FEGLITRNVH
Sbjct: 293  FLANVKELNSHKQTKEDTLRKAEEIFGPDNKDLYVIFEGLITRNVH 338


>ref|XP_002314437.1| predicted protein [Populus trichocarpa] gi|222863477|gb|EEF00608.1|
            predicted protein [Populus trichocarpa]
          Length = 346

 Score =  379 bits (972), Expect = e-102
 Identities = 216/352 (61%), Positives = 256/352 (72%), Gaps = 6/352 (1%)
 Frame = +2

Query: 83   MLAKESSVSNKFDLPEEVLTILPSDPFEQLDIARKITSIALATRVSKLESESSHLRSQLT 262
            ML+KES  S  FDLPE+VL +LPSDPF+QLD+ARKITSIAL+TRVS LESESS LR++L 
Sbjct: 1    MLSKESGGS-AFDLPEDVLQVLPSDPFQQLDVARKITSIALSTRVSALESESSLLRAKLA 59

Query: 263  EKEDQLTELQSQIDSLDASLNETLDKLAHADEEKERLLKENASLSVTVKKLNRDVSKLEI 442
            EK+D +  LQ+QI+SLD+SL+++ DKL+ A +EKE LLKENASLS TVKKL RDVSKLE+
Sbjct: 60   EKDDFIAHLQAQIESLDSSLSDSSDKLSRATQEKENLLKENASLSNTVKKLQRDVSKLEV 119

Query: 443  FRKTLVQSLQEEEDTAQGGVSQVLKKHIQNN------PXXXXXXXXXXXXXXXXXXXXXX 604
            FRKTLVQSLQE+E+++  G  Q++ K   N       P                      
Sbjct: 120  FRKTLVQSLQEDEESS-AGAPQIIAKPTPNEDDATLPPSRYSSIQSKVPEMGNSFAEDRE 178

Query: 605  XXXXXXXXXXXXXXGYRHGTSQGPLLASYSSTPRLTPPVSPPSLSAAGSPTRRSKPGSPR 784
                            R G  Q  LLAS ++TPR TPP SPPS SA+ SPTR SKP SP+
Sbjct: 179  TDVLMLLHLVIFMAAPRPGIPQ-ILLASQTNTPRFTPPGSPPSFSASVSPTRTSKPVSPK 237

Query: 785  RHSISFANSRGVFDERSSGFSSIPSSQHGSLSSSFDMGSQTGRTRVDGKEFFRQVRSRLS 964
            R S+SF+ +R + D+RS  FSS+ SSQH S+SS  D GSQ GRTRVDGKEFFRQVR+RLS
Sbjct: 238  RQSMSFSITRSM-DDRSPAFSSLSSSQHSSMSS--DAGSQAGRTRVDGKEFFRQVRTRLS 294

Query: 965  YEQFGAFLANVKELNSHKQNREETLRKADEIFGPDNKDLYVVFEGLITRNVH 1120
            YEQFGAFLANVKELNSHKQ +EETLRKA+EIFGPDNKDLY +FEGLITRNVH
Sbjct: 295  YEQFGAFLANVKELNSHKQTKEETLRKAEEIFGPDNKDLYTIFEGLITRNVH 346


>ref|XP_003609552.1| hypothetical protein MTR_4g118510 [Medicago truncatula]
            gi|355510607|gb|AES91749.1| hypothetical protein
            MTR_4g118510 [Medicago truncatula]
          Length = 344

 Score =  366 bits (939), Expect = 8e-99
 Identities = 204/338 (60%), Positives = 242/338 (71%), Gaps = 3/338 (0%)
 Frame = +2

Query: 116  FDLPEEVLTILPSDPFEQLDIARKITSIALATRVSKLESESSHLRSQLTEKEDQLTELQS 295
            FDLPE+V+ +LPSDPFEQLD+ARKITSIAL+TRV  LE ESS LR++  EK++ + ELQS
Sbjct: 10   FDLPEDVMQVLPSDPFEQLDVARKITSIALSTRVKALELESSELRAKTAEKDELIAELQS 69

Query: 296  QIDSLDASLNETLDKLAHADEEKERLLKENASLSVTVKKLNRDVSKLEIFRKTLVQSLQE 475
            Q++SLD SL++T D L  A+++KE LLKENASLS TV+KLNRDVSKLE+FRKTL+QSLQE
Sbjct: 70   QLESLDVSLSQTADNLVRAEQDKENLLKENASLSNTVRKLNRDVSKLEVFRKTLMQSLQE 129

Query: 476  EEDTAQGGVSQVLKKHIQNN--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 649
            +ED + G    V +   Q++                                        
Sbjct: 130  DEDNSGGAPDIVARIQSQSSLTSTSQYGDNGASFQPSISSSMPHVSDSENSYAEDQESDD 189

Query: 650  YRHGTSQGPLLASYSSTPRLTPPVSPPSLSAAGSPTRRSKPGSPRRHSISFANSRGVFDE 829
             R       L+AS  +TP +TP  SPPSLSA+ SPTR S+P SPRRHSISF+ SRG  D+
Sbjct: 190  IRPRVPYNLLVASQRTTPLITPTGSPPSLSASVSPTRTSRPMSPRRHSISFSTSRGTHDD 249

Query: 830  RSSGFSSIPSSQHGSLSSSFDM-GSQTGRTRVDGKEFFRQVRSRLSYEQFGAFLANVKEL 1006
            RSS FSSI    HGS+SSS  + GSQ+GRTRVDGKEFFRQVR+RLSYEQFGAFLANVKEL
Sbjct: 250  RSSVFSSIG---HGSISSSDSVTGSQSGRTRVDGKEFFRQVRNRLSYEQFGAFLANVKEL 306

Query: 1007 NSHKQNREETLRKADEIFGPDNKDLYVVFEGLITRNVH 1120
            NSHKQ RE TL+KADEIFGP+NKDLY VFEGLITRNVH
Sbjct: 307  NSHKQTREVTLQKADEIFGPENKDLYTVFEGLITRNVH 344


>ref|XP_003546113.1| PREDICTED: uncharacterized protein LOC100776071 [Glycine max]
          Length = 332

 Score =  363 bits (932), Expect = 5e-98
 Identities = 203/351 (57%), Positives = 245/351 (69%), Gaps = 5/351 (1%)
 Frame = +2

Query: 83   MLAKESSVSNKFDLPEEVLTILPSDPFEQLDIARKITSIALATRVSKLESESSHLRSQLT 262
            ML  ESS S K DLPEE+L +LPSDP+EQLD+ARKITS+AL+TRV  L+SESS LR++L 
Sbjct: 1    MLVSESSGS-KVDLPEELLNVLPSDPYEQLDVARKITSVALSTRVDALQSESSALRAELA 59

Query: 263  EKEDQLTELQSQIDSLDASLNETLDKLAHADEEKERLLKENASLSVTVKKLNRDVSKLEI 442
            ++   + ELQSQ++S+DA+L+E  DKLA AD++KE LLKENASLS TV+KL RDVSKLE 
Sbjct: 60   DRNRLIAELQSQVESIDAALSEAADKLARADQDKENLLKENASLSNTVRKLTRDVSKLET 119

Query: 443  FRKTLVQSLQEEEDTAQGGVSQVLKKHIQ----NNPXXXXXXXXXXXXXXXXXXXXXXXX 610
            FRKTL++SL+E+EDT++G      K H Q    +                          
Sbjct: 120  FRKTLMKSLREDEDTSEGTPDTAAKLHSQASFTSTSQFGDDDASSTLSSRTSSMRINTSD 179

Query: 611  XXXXXXXXXXXXGYRHGTSQGPLLASYSSTPRLTPPVSPPSLSAAGSPTRRS-KPGSPRR 787
                        G +   S   LLAS +STPR+TPP SPPS+SA  SPTR S KP SPRR
Sbjct: 180  MGNYLAEDRESDGSKSRASHNLLLASQTSTPRITPPGSPPSMSALVSPTRTSSKPVSPRR 239

Query: 788  HSISFANSRGVFDERSSGFSSIPSSQHGSLSSSFDMGSQTGRTRVDGKEFFRQVRSRLSY 967
            H+ISF+ SRG+FD+RSS                  +GSQTGRTRVDGKEFFRQVRSRLSY
Sbjct: 240  HAISFSTSRGMFDDRSS------------------VGSQTGRTRVDGKEFFRQVRSRLSY 281

Query: 968  EQFGAFLANVKELNSHKQNREETLRKADEIFGPDNKDLYVVFEGLITRNVH 1120
            EQFGAFLANVKELNSHKQ +EETL+KA+E+FGP+NKDLY +FEGLITRNVH
Sbjct: 282  EQFGAFLANVKELNSHKQTKEETLQKANELFGPENKDLYTIFEGLITRNVH 332


>ref|XP_002278619.2| PREDICTED: uncharacterized protein LOC100252741 [Vitis vinifera]
            gi|297736943|emb|CBI26144.3| unnamed protein product
            [Vitis vinifera]
          Length = 332

 Score =  363 bits (931), Expect = 7e-98
 Identities = 211/348 (60%), Positives = 248/348 (71%), Gaps = 2/348 (0%)
 Frame = +2

Query: 83   MLAKESSVSNKFDLPEEVLTILPSDPFEQLDIARKITSIALATRVSKLESESSHLRSQLT 262
            M AKE    + FDLPEEVL +LPSDPFEQLD+ARKITSIAL+ RVS LESE+S LRS+L 
Sbjct: 1    MFAKEPGTPS-FDLPEEVLEVLPSDPFEQLDVARKITSIALSARVSALESEASALRSKLA 59

Query: 263  EKEDQLTELQSQIDSLDASLNETLDKLAHADEEKERLLKENASLSVTVKKLNRDVSKLEI 442
            +K+  + +L  QI+SLD +L++  DKL  A++EKE LLKENASLS TVKKLNRDVSKLE 
Sbjct: 60   DKDALVADLHDQIESLDHALSDAADKLFLAEQEKENLLKENASLSNTVKKLNRDVSKLES 119

Query: 443  FRKTLVQSLQEEEDTAQGGVSQVLKKHI--QNNPXXXXXXXXXXXXXXXXXXXXXXXXXX 616
            FRKTL+ SL+E+E+++ G   QV+ K +  Q++                           
Sbjct: 120  FRKTLMLSLKEDEESS-GASPQVVAKQMAAQSSLSSASMTGEDDATSRYSSTRSQYSEIG 178

Query: 617  XXXXXXXXXXGYRHGTSQGPLLASYSSTPRLTPPVSPPSLSAAGSPTRRSKPGSPRRHSI 796
                        R G S G LLAS ++TPRLTPP SPP+LSA+ SP         RRHSI
Sbjct: 179  NSFAEDRETDASRAGISHGFLLASQTNTPRLTPPGSPPTLSASVSP---------RRHSI 229

Query: 797  SFANSRGVFDERSSGFSSIPSSQHGSLSSSFDMGSQTGRTRVDGKEFFRQVRSRLSYEQF 976
            S + SRG+FD+R S    +P+SQH S+SSS + GSQTGRTRVDGKEFFRQVRSRLSYEQF
Sbjct: 230  SLSTSRGMFDDRPS----VPTSQHSSMSSS-ESGSQTGRTRVDGKEFFRQVRSRLSYEQF 284

Query: 977  GAFLANVKELNSHKQNREETLRKADEIFGPDNKDLYVVFEGLITRNVH 1120
            GAFLANVKELNSHKQ REETLRKADEIFGPDNKDLY VFEGLITRNVH
Sbjct: 285  GAFLANVKELNSHKQTREETLRKADEIFGPDNKDLYAVFEGLITRNVH 332


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