BLASTX nr result

ID: Coptis24_contig00004459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004459
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277155.2| PREDICTED: uncharacterized protein LOC100246...   364   3e-98
gb|ABK25232.1| unknown [Picea sitchensis]                             318   3e-84
ref|XP_004143471.1| PREDICTED: uncharacterized protein LOC101210...   308   3e-81
ref|XP_002314721.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80
ref|XP_002312515.1| predicted protein [Populus trichocarpa] gi|2...   302   2e-79

>ref|XP_002277155.2| PREDICTED: uncharacterized protein LOC100246806 [Vitis vinifera]
            gi|296086423|emb|CBI32012.3| unnamed protein product
            [Vitis vinifera]
          Length = 307

 Score =  364 bits (935), Expect = 3e-98
 Identities = 191/308 (62%), Positives = 239/308 (77%), Gaps = 3/308 (0%)
 Frame = -1

Query: 1227 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSSSN-AD-T 1054
            MAMQT G+G +K++ILVGAGYT TI+LKN KLSD+LGELQSLVKG+EK GDSS+  AD +
Sbjct: 1    MAMQT-GVGVSKILILVGAGYTSTILLKNGKLSDILGELQSLVKGLEKKGDSSNGEADYS 59

Query: 1053 ETLAEQVRRLAQEIRNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLK 874
            + +A QVRRLA E++ +  +RQIT+LNG+SG  GN+ +LA+P   LGA+GYGYMWWKGL 
Sbjct: 60   DAIAAQVRRLAMEVKQLASARQITVLNGNSGQIGNITSLAIPAATLGALGYGYMWWKGLS 119

Query: 873  LSDLMYVTKKSMATAVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKN 694
            +SDLMYVTKK+M TAV ++ KHLE VS AL+ATKRHLTQRIENLDGKLDEQKE+SKLIKN
Sbjct: 120  ISDLMYVTKKNMETAVTNLKKHLEHVSDALSATKRHLTQRIENLDGKLDEQKEISKLIKN 179

Query: 693  EVTEVRGDLSQIGYDLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISE 514
            EVTE RGD+SQIG+DLDSL R+V+GLDGKI SLE KQ++A  GV YL N V  +   +SE
Sbjct: 180  EVTEARGDISQIGFDLDSLQRMVSGLDGKIGSLEYKQNFAVEGVVYLCNAVNGRSVPMSE 239

Query: 513  -YLKLMPKPNKPRGYIGFPETQDSKGLKQIADTLKLVNGSATDTTVQDNIGRMDSCPRSL 337
              LK +  P K  G +   E    +GLK+IA ++   N  +++  VQD + ++D  PRSL
Sbjct: 240  TMLKQLKLPGKSHGLLTSTEAPSFQGLKEIAGSIISENSRSSNGIVQDGVDKLDDQPRSL 299

Query: 336  TRTASIKC 313
            TRT S+KC
Sbjct: 300  TRTFSVKC 307


>gb|ABK25232.1| unknown [Picea sitchensis]
          Length = 324

 Score =  318 bits (814), Expect = 3e-84
 Identities = 166/287 (57%), Positives = 224/287 (78%), Gaps = 3/287 (1%)
 Frame = -1

Query: 1227 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSSSNADTET 1048
            MAMQ AG+  +K+++LVGAG TG++++++ +LSD++ ELQ L+KGI++ G+SSSN ++  
Sbjct: 1    MAMQ-AGVATSKVLVLVGAGLTGSVLIRSGRLSDIISELQGLLKGIDERGESSSNTESAA 59

Query: 1047 -LAEQVRRLAQEIRNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLKL 871
             LA Q+RRLAQE+R +  SR IT+LNG+SG +GN A+L +P  ALGA+GY YMWWKG   
Sbjct: 60   VLAAQIRRLAQEVRQLASSRPITVLNGNSGQSGNAASLLMPVAALGAMGYCYMWWKGWSF 119

Query: 870  SDLMYVTKKSMATAVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKNE 691
            SDLMYVTK++M  AVAS+TK L+QVS ALAATKRHLTQRIE LDGK+DEQKE+SKLIKNE
Sbjct: 120  SDLMYVTKRNMTNAVASVTKQLDQVSAALAATKRHLTQRIECLDGKMDEQKEISKLIKNE 179

Query: 690  VTEVRGDLSQIGYDLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFV-GAKDEKISE 514
            V+EVR D+SQIG+D+D++ ++V+GL+GKI+SLE KQD+ANAGV+YL  FV G KD ++ E
Sbjct: 180  VSEVREDISQIGFDIDAIQKMVSGLEGKIVSLEDKQDFANAGVWYLCQFVGGTKDARMGE 239

Query: 513  YLKLMP-KPNKPRGYIGFPETQDSKGLKQIADTLKLVNGSATDTTVQ 376
             L+  P K    R    F E +  KGL+ IADT++  +GS   T ++
Sbjct: 240  LLQDFPAKARLERTASTFTEDKSLKGLQYIADTIQ--SGSIEKTKIK 284


>ref|XP_004143471.1| PREDICTED: uncharacterized protein LOC101210112 [Cucumis sativus]
          Length = 293

 Score =  308 bits (788), Expect = 3e-81
 Identities = 169/308 (54%), Positives = 217/308 (70%), Gaps = 3/308 (0%)
 Frame = -1

Query: 1227 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSSSNAD--T 1054
            MAM T G+G +K++ILVGAGY+ TI+LKN KLSD+LGELQSLVKG+EK+G+ S      +
Sbjct: 1    MAMHT-GVGLSKILILVGAGYSTTIMLKNGKLSDVLGELQSLVKGMEKSGEQSDGDSDYS 59

Query: 1053 ETLAEQVRRLAQEIRNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLK 874
            + +A QVRRLA E+R +  SRQITILNG+SG  GN+++L VP   LGA+GYGYMWWKGL 
Sbjct: 60   DAIAAQVRRLAMEVRQLSSSRQITILNGNSGNIGNLSSLIVPAATLGALGYGYMWWKGLS 119

Query: 873  LSDLMYVTKKSMATAVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKN 694
             SDLMYVTK++MA AV+++TKHLE VS ALAATKRHLTQRIENLD K+ +Q E+SKLIK 
Sbjct: 120  FSDLMYVTKRNMANAVSNLTKHLEHVSEALAATKRHLTQRIENLDDKMVKQNELSKLIKE 179

Query: 693  EVTEVRGDLSQIGYDLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISE 514
            +V  V+  LS I +DL  LH +V+GLDGK+  LE KQD+A  GV YL N V  K  K+ +
Sbjct: 180  DVAGVQKSLSDIDFDLGELHNMVSGLDGKLSQLEFKQDFATLGVMYLCNVVDGKQVKMPD 239

Query: 513  YLKLMPK-PNKPRGYIGFPETQDSKGLKQIADTLKLVNGSATDTTVQDNIGRMDSCPRSL 337
             LK   K   K +G +   E+ + KGLK++ DTL      + D T +         PR+L
Sbjct: 240  TLKEQFKLSGKAQGQLMHLESPNLKGLKELTDTL------SQDITCEQ--------PRAL 285

Query: 336  TRTASIKC 313
             R+ S +C
Sbjct: 286  LRSTSTRC 293


>ref|XP_002314721.1| predicted protein [Populus trichocarpa] gi|222863761|gb|EEF00892.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  305 bits (781), Expect = 2e-80
 Identities = 166/317 (52%), Positives = 222/317 (70%), Gaps = 12/317 (3%)
 Frame = -1

Query: 1227 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSSSNAD--T 1054
            MAMQ AGIG ++++IL GAGYTGTI+LKN KLS+L+ ELQSLVKG+EK+G+ S      +
Sbjct: 1    MAMQ-AGIGVSRILILAGAGYTGTIMLKNGKLSELIAELQSLVKGMEKSGEKSDGDSDYS 59

Query: 1053 ETLAEQVRRLAQEIRNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLK 874
            + +A+QVRRLA E+R +  +RQIT+L+G+ G  GN+  L +P   LGA+GYGYMWWKGLK
Sbjct: 60   DAIAQQVRRLAMEVRQLASARQITVLSGNPGQMGNLTGLIIPAATLGALGYGYMWWKGLK 119

Query: 873  LSDLMYVTKKSMATAVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKN 694
             SDLMYVTK+SMA+AV+++TKHLEQVS AL+  K HLTQRI++LD K++ QKE+SK I+N
Sbjct: 120  FSDLMYVTKRSMASAVSNLTKHLEQVSEALSTAKTHLTQRIQHLDDKMESQKEISKAIQN 179

Query: 693  EVTEVRGDLSQIGYDLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISE 514
            +V     +L+ IG +L  L  LV+GLDGKI SLE KQD AN GV YL NFVG K  K+ +
Sbjct: 180  DVNAASENLTLIGSELWQLQCLVSGLDGKIGSLEEKQDIANMGVMYLCNFVGGKKAKMPK 239

Query: 513  YLKLMPKPN-KPRGYIGFPETQDSKGLKQIADTL-KLVNGSATDTTVQDNIGRMD----- 355
             L+   KP+ + R  + + E     GLK++AD L +  +  ATD T+QD    ++     
Sbjct: 240  ALEDQLKPSGRTRASLAYAEVPSLTGLKELADDLSQTFSKPATDATLQDGTDNLEDQLRT 299

Query: 354  ---SCPRSLTRTASIKC 313
                 PR+L R  S +C
Sbjct: 300  PRNDQPRALLRFNSARC 316


>ref|XP_002312515.1| predicted protein [Populus trichocarpa] gi|222852335|gb|EEE89882.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  302 bits (773), Expect = 2e-79
 Identities = 169/318 (53%), Positives = 219/318 (68%), Gaps = 13/318 (4%)
 Frame = -1

Query: 1227 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSSSNAD--T 1054
            MAMQ AG+  ++++IL GAGYTGTI+LKN KLS+LLGELQSL KG+ K+G+ S      +
Sbjct: 1    MAMQ-AGVSVSRILILAGAGYTGTIMLKNGKLSELLGELQSLTKGMGKSGEQSDGDSDYS 59

Query: 1053 ETLAEQVRRLAQEIRNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLK 874
            + +A+QVRRLA E+R +  +RQIT+LNG+SG  GN+  L  P   LGA+GYGYMWWKGLK
Sbjct: 60   DAIAQQVRRLAMEVRQLASARQITVLNGNSGQMGNLTGLIAPAATLGALGYGYMWWKGLK 119

Query: 873  LSDLMYVTKKSMATAVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKN 694
             SD MYVTK+SMA+AV+++TKHLEQVS AL+  K HLTQRI+ LD K++ QKE+SK I+N
Sbjct: 120  FSDFMYVTKRSMASAVSNLTKHLEQVSEALSTAKTHLTQRIQLLDDKMESQKEISKAIQN 179

Query: 693  EVTEVRGDLSQIGYDLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISE 514
            +V     +L+QIG +L  L  LV+GLDGKI SLE KQD AN GV YL NFVG K  K+ +
Sbjct: 180  DVNAASENLTQIGSELWQLQCLVSGLDGKIGSLEEKQDIANMGVMYLCNFVGGKKAKMPK 239

Query: 513  YLKLMPKPN-KPRGYIGFPETQDSKGLKQIADTLKLVNGS-ATDTTVQD---------NI 367
             L+   KP+ + R  + + E     GLK++AD L    G  ATD  +QD          I
Sbjct: 240  ALEDQFKPSGRTRASLMYSEVPSLTGLKELADDLSQTFGEPATDAILQDGTDNLEDQPRI 299

Query: 366  GRMDSCPRSLTRTASIKC 313
             R+D  PR+L R  S +C
Sbjct: 300  PRIDQ-PRALLRFNSARC 316


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