BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004458
         (1736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]...   424   e-116
gb|ADW83727.1| ubiquitin 2 [Musa acuminata AAA Group]                 415   e-113
ref|XP_002282473.2| PREDICTED: ubiquilin-1-like [Vitis vinifera]      395   e-107
emb|CAN59899.1| hypothetical protein VITISV_002886 [Vitis vinifera]   394   e-107
ref|XP_003517138.1| PREDICTED: ubiquilin-4-like [Glycine max]         390   e-106

>ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]
            gi|223539097|gb|EEF40693.1| plant ubiquilin, putative
            [Ricinus communis]
          Length = 548

 Score =  424 bits (1089), Expect = e-116
 Identities = 268/548 (48%), Positives = 315/548 (57%), Gaps = 89/548 (16%)
 Frame = +2

Query: 62   NKMSGDVSSS--EKVNLNV--VHGSKFSVEINLDSSVSEFKDVLAQNLNIPAQQQRLIYK 229
            N  S D SS+  ++VN+N+   +GSKFSV I+L  SV  FK VLA   ++PA QQRLIYK
Sbjct: 5    NGASVDESSNGGDEVNVNIRCSNGSKFSVGISLSESVETFKTVLAGKCDVPADQQRLIYK 64

Query: 230  GRVLKDDRTLNSYGLQADHTVHLVCALXXXXXXXXXXXXXXXXEIPNFGQTQ-------- 385
            GR+LKDD+TL SYGL+ADHTVHLV                     P    T+        
Sbjct: 65   GRILKDDQTLQSYGLEADHTVHLVRGFAPAAAANTAPPSNTGGSNPASTNTRAVGSNEGG 124

Query: 386  ---NSDMMMRDIMNMPAI------------------QNMMNNGDIVRD------------ 466
                SD+ +   M +  +                  Q +  N +I+R+            
Sbjct: 125  ALGGSDLGLFPGMRLNGLGGSAGLFGAGLPEFEQVQQQLTRNPNIMREIMNTPVVQNLMN 184

Query: 467  -------LIMSNPQMREVIDRNPELAHILNDPATLRQTLEASRNPELMREMMRNTDRAMS 625
                   LIM+NPQMRE+IDRNPELAHILNDP+TLRQTLEA+RNPELMREMMRNTDRAMS
Sbjct: 185  NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMS 244

Query: 626  NIEASPEGFNMLRRMYETVQEPLMNATTMAAN----------------SGSRMRDIXXXX 757
            NIE+SPEGFNMLRRMYETVQEP +NATTMA N                +G++  D     
Sbjct: 245  NIESSPEGFNMLRRMYETVQEPFLNATTMAGNTGGDSANPFAALLGNQAGNQASDATTNP 304

Query: 758  XXXXXXXXXXXXXPNTNPLPNPWSNAGAAGVAQRNTARSTRAGG----TP-GIGGLSDLG 922
                         PNTNPLPNPW+  G  G A  NTARS+  G     TP G+GG   LG
Sbjct: 305  SIASSESTTGSPAPNTNPLPNPWTATGTGG-ALNNTARSSNTGDARPQTPVGLGG---LG 360

Query: 923  LPNMD-------------QFVPSPAVAQRIRSLLSNPQAMNRVLG--PQMQNMLDSNPQL 1057
            LP  D             Q + +PA++Q ++SLLSNPQ MN++LG  PQ ++MLDSN Q 
Sbjct: 361  LPEFDSMFGAMPDSNVMSQMLQNPAISQMMQSLLSNPQYMNQMLGSNPQFRSMLDSNSQF 420

Query: 1058 REMMQNPNFVSRLTSPET-XXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGGLNNMGLDFW 1234
            REMMQNP F+ +LTSPET                             G G  NNMGLD  
Sbjct: 421  REMMQNPEFLRQLTSPETMQQLLTFQQALLSQFGRQQSNQEPGQTGAGTGTPNNMGLDML 480

Query: 1235 MNMLGLLGAAGVNVPNAPNVPAEQLYANQLSQLQEMGFFDTQENIRALSVTAGNVHAAVE 1414
            MNM G LGA  + VPN  NVP E+LYA QLSQLQEMGFFDTQENIRAL  TAGNVHAAVE
Sbjct: 481  MNMFGGLGAGSLAVPNRSNVPPEELYATQLSQLQEMGFFDTQENIRALIATAGNVHAAVE 540

Query: 1415 RLLGNPGQ 1438
            RLLGN GQ
Sbjct: 541  RLLGNSGQ 548


>gb|ADW83727.1| ubiquitin 2 [Musa acuminata AAA Group]
          Length = 504

 Score =  415 bits (1067), Expect = e-113
 Identities = 242/496 (48%), Positives = 303/496 (61%), Gaps = 49/496 (9%)
 Frame = +2

Query: 98   VNLNVVHGSKFSVEINLDSSVSEFKDVLAQNLNIPAQQQRLIYKGRVLKDDRTLNSYGLQ 277
            V++    GSKFSV+  LD++V  FK V+A + ++P ++QR+IYKGRVL DD+TL SYG++
Sbjct: 12   VHIRCSSGSKFSVQTPLDATVDAFKAVVAGSCDVPVEEQRMIYKGRVLNDDQTLASYGVE 71

Query: 278  ADHTVHLVCALXXXXXXXXXXXXXXXXE---------------IPNFGQ----TQNSDMM 400
            +DHT+HL+                                   IP F Q    TQN + +
Sbjct: 72   SDHTIHLIRGSARSAMSVNTEVHNQGPSRTSDRNSASGFFGTGIPEFDQMQQLTQNCN-V 130

Query: 401  MRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQTLEASRNP 580
             R+IMN+PAIQN++NN DI+R L M NPQMRE+IDRNP+LA +LND +TLRQTLEA RNP
Sbjct: 131  TREIMNLPAIQNLINNPDIIRSLFMDNPQMREIIDRNPDLARVLNDSSTLRQTLEAVRNP 190

Query: 581  ELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMAANSGSRM-------- 736
            ELMRE+MRN+DR MSNIE+SPEGFNMLRRMYETVQEP  NA TM  + G  +        
Sbjct: 191  ELMREVMRNSDRVMSNIESSPEGFNMLRRMYETVQEPFFNAATMGGDLGGNVGSNAFSAL 250

Query: 737  -------RDIXXXXXXXXXXXXXXXXXPNTNPLPNPW-SNA-GAAGVAQRNTARSTRAGG 889
                   +D                  PNTNPLPNPW SNA GA  V+ R+   ST   G
Sbjct: 251  LINQVTGQDSERSSNLTTSSEPTTDSGPNTNPLPNPWGSNAVGAQPVSTRSDPGSTT--G 308

Query: 890  TPGIGGLSDLGLPNM----------DQFVPSPAVAQRIRSLLSNPQAMNRV--LGPQMQN 1033
             PG+GGL  L + +M           Q + +PA+ Q +++LLS+PQ +N++  L P M+ 
Sbjct: 309  IPGLGGLGSLDMEHMVGRLQDSSQLSQVLQNPAMMQTMQNLLSDPQYVNQMLDLNPNMRG 368

Query: 1034 MLDSNPQLREMMQNPNFVSRLTSPET-XXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGGL 1210
            +L+SN QLREM+QNP+F+ +L SPET                             G G  
Sbjct: 369  LLESNTQLREMLQNPDFLCQLMSPETMQQLLSFRQSMFSHVGRQQSSLEQGQTGGGVGTT 428

Query: 1211 NNMGLDFWMNMLGLLGAAGVNVPNAPNVPAEQLYANQLSQLQEMGFFDTQENIRALSVTA 1390
            NN GLDF +NM G LG  G  VPN  NVP E+LYA QLSQLQEMGFFDT+ENIRAL+ TA
Sbjct: 429  NNTGLDFLINMFGGLGTGGPGVPNTSNVPPEELYATQLSQLQEMGFFDTRENIRALTATA 488

Query: 1391 GNVHAAVERLLGNPGQ 1438
            GNVHAAVERLLGN GQ
Sbjct: 489  GNVHAAVERLLGNSGQ 504


>ref|XP_002282473.2| PREDICTED: ubiquilin-1-like [Vitis vinifera]
          Length = 558

 Score =  395 bits (1016), Expect = e-107
 Identities = 223/389 (57%), Positives = 255/389 (65%), Gaps = 36/389 (9%)
 Frame = +2

Query: 380  TQNSDMMMRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQT 559
            TQN +MM R+IMNMPAIQN+MNN D++R LIM+NPQMRE+IDRNPELAHILND   LRQT
Sbjct: 174  TQNPNMM-REIMNMPAIQNLMNNPDLMRSLIMNNPQMREIIDRNPELAHILNDTGILRQT 232

Query: 560  LEASRNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMAANSGSRM- 736
            LEA+RNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYE VQEP +NATTM+ +SG+ + 
Sbjct: 233  LEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMSGDSGNTLG 292

Query: 737  ----------------RDIXXXXXXXXXXXXXXXXXPNTNPLPNPWSNAGAAGVAQRNTA 868
                            RD                  PNTNPLPNPWS   A G    NTA
Sbjct: 293  SNPFAALLGNQGGAQARDGSNNPSTTGAEATAGLTAPNTNPLPNPWS---AGGAQTNNTA 349

Query: 869  RSTRAGG--TPGIGGLSDLGLPNMD-------------QFVPSPAVAQRIRSLLSNPQAM 1003
            RS  AG    P + GL  LGLP M+             Q + +PAV+Q ++SLLSNPQ M
Sbjct: 350  RSIPAGDARAPSVAGLGGLGLPEMERMLNGMPDATLFNQLLQNPAVSQMMQSLLSNPQYM 409

Query: 1004 NRVL--GPQMQNMLDSNPQLREMMQNPNFVSRLTSPETXXXXXXXXXXXXXXXXXXXXXX 1177
            N++L   PQ++ MLD NPQLRE+MQNP  + +LTSPET                      
Sbjct: 410  NQILNFNPQLRGMLDMNPQLREIMQNPELLRQLTSPETMQQMMSLQQSLLSQLNRQQSTQ 469

Query: 1178 XXXXXXG--AGGLNNMGLDFWMNMLGLLGAAGVNVPNAPNVPAEQLYANQLSQLQEMGFF 1351
                  G   G  NN+GLD  MNM G LGA  +NVPN P+VP EQLYA QLSQLQEMGFF
Sbjct: 470  EPGQTGGGTTGTPNNIGLDLLMNMFGGLGAGSLNVPNTPDVPPEQLYATQLSQLQEMGFF 529

Query: 1352 DTQENIRALSVTAGNVHAAVERLLGNPGQ 1438
            DTQENIRAL  T+GNVHAAVERLLGNPGQ
Sbjct: 530  DTQENIRALRATSGNVHAAVERLLGNPGQ 558


>emb|CAN59899.1| hypothetical protein VITISV_002886 [Vitis vinifera]
          Length = 566

 Score =  394 bits (1013), Expect = e-107
 Identities = 223/389 (57%), Positives = 254/389 (65%), Gaps = 36/389 (9%)
 Frame = +2

Query: 380  TQNSDMMMRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQT 559
            TQN +MM R+IMNMPAIQN+MNN D++R LIM+NPQMRE+IDRNPELAHILND   LRQT
Sbjct: 182  TQNPNMM-REIMNMPAIQNLMNNPDLMRSLIMNNPQMREIIDRNPELAHILNDTGILRQT 240

Query: 560  LEASRNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMAANSGSRM- 736
            LEA+RNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYE VQEP +NATTM+ +SG+ + 
Sbjct: 241  LEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMSGDSGNTLG 300

Query: 737  ----------------RDIXXXXXXXXXXXXXXXXXPNTNPLPNPWSNAGAAGVAQRNTA 868
                            RD                  PNTNPLPNPWS   A G    NTA
Sbjct: 301  SNPFAALLGNQGGAQARDGSNNPSTTGAEATAGLTAPNTNPLPNPWS---AGGAQTNNTA 357

Query: 869  RSTRAGG--TPGIGGLSDLGLPNMD-------------QFVPSPAVAQRIRSLLSNPQAM 1003
            RS  AG    P + GL  LGLP M+             Q + +PAV+Q ++SLLSNPQ M
Sbjct: 358  RSIPAGDARAPSVAGLGRLGLPEMERMLNGMPDATLFNQLLQNPAVSQMMQSLLSNPQYM 417

Query: 1004 NRVL--GPQMQNMLDSNPQLREMMQNPNFVSRLTSPETXXXXXXXXXXXXXXXXXXXXXX 1177
            N++L   PQ++ MLD NPQLRE+MQNP  + +LTSPET                      
Sbjct: 418  NQILNFNPQLRGMLDMNPQLREIMQNPELLRQLTSPETMQQMMSLQQSLLSQLNRQQSTQ 477

Query: 1178 XXXXXXG--AGGLNNMGLDFWMNMLGLLGAAGVNVPNAPNVPAEQLYANQLSQLQEMGFF 1351
                  G   G  NN+GLD  MNM G LGA  +NVPN P+VP EQLYA QLSQLQEMGFF
Sbjct: 478  EPGQTGGGTTGTPNNIGLDLLMNMFGGLGAGSLNVPNTPDVPPEQLYATQLSQLQEMGFF 537

Query: 1352 DTQENIRALSVTAGNVHAAVERLLGNPGQ 1438
            DTQENIRAL  T GNVHAAVERLLGNPGQ
Sbjct: 538  DTQENIRALRATXGNVHAAVERLLGNPGQ 566


>ref|XP_003517138.1| PREDICTED: ubiquilin-4-like [Glycine max]
          Length = 541

 Score =  390 bits (1003), Expect = e-106
 Identities = 242/527 (45%), Positives = 307/527 (58%), Gaps = 73/527 (13%)
 Frame = +2

Query: 77   DVSSSEKVNLNVVHGSKFSVEINLDSSVSEFKDVLAQNLNIPAQQQRLIYKGRVLKDDRT 256
            + ++   +N+   +GSKFSV+I LDS++  FKD +A+N +I A QQRLIYKGR+LKDD+T
Sbjct: 17   NAANGVNINIRCSNGSKFSVQIGLDSTIRSFKDAVARNCDISADQQRLIYKGRILKDDQT 76

Query: 257  LNSYGLQADHTVHLVCALXXXXXXXXXXXXXXXXEI-----------------PNFGQTQ 385
            L SYGL+ADHTVHLV                                      P FG + 
Sbjct: 77   LQSYGLEADHTVHLVRGFAPSNTTGGTNSVGGGNTTTANTRGAGANEGGGLGGPGFGASL 136

Query: 386  NSDMMMRDIM-----------NMPAIQNM----MNNGDIVRDL--------IMSNP---- 484
               +   + M             P ++ M    ++N +++RD+        +++NP    
Sbjct: 137  FPGLGGNNGMGGGGLNGLFGAGFPDLEQMQQPFLSNPNLMRDIMNTPAMQNLINNPDIVR 196

Query: 485  -------QMREVIDRNPELAHILNDPATLRQTLEASRNPELMREMMRNTDRAMSNIEASP 643
                   QM+E++DRNPELAHILNDP+TLRQTLEA+RNPE+MREMMRNTDRAMSNIE+SP
Sbjct: 197  NLIMNNPQMQELMDRNPELAHILNDPSTLRQTLEATRNPEIMREMMRNTDRAMSNIESSP 256

Query: 644  EGFNMLRRMYETVQEPLMNATTMAANSGSRMRDI-XXXXXXXXXXXXXXXXXPNTNPLPN 820
            EGFNMLRRMYE VQEP +NATTMA N+G+    +                  PNTNPLPN
Sbjct: 257  EGFNMLRRMYENVQEPFLNATTMAGNTGNDAAAVRNQSTNPSTTNSEATSPVPNTNPLPN 316

Query: 821  PWSNAGAAGVAQRNTARSTRAGG-----TP-GIGGLS--DL-------GLPN---MDQFV 946
            PWS+ G  G  Q NT RST  GG     TP G+GGL   DL       G+P+   + Q +
Sbjct: 317  PWSSTGTGG-GQNNTRRSTTTGGEARQSTPTGLGGLGLPDLEGMLGGTGMPDAAMLTQLM 375

Query: 947  PSPAVAQRIRSLLSNPQAMNRVLG--PQMQNMLDSNPQLREMMQNPNFVSRLTSPET-XX 1117
             +PA++Q ++S+LSNPQ MN++LG   + + M D N  LRE+MQNP F+   +SPET   
Sbjct: 376  QNPAISQMMQSILSNPQTMNQILGVNNEQRGMPDLN-SLREVMQNPEFLRLFSSPETLQQ 434

Query: 1118 XXXXXXXXXXXXXXXXXXXXXXXXXXGAGGLNNMGLDFWMNMLGLLGAAGVNVPNAPNVP 1297
                                      G G +NN+GL+   +M G LGA  + VPN  N P
Sbjct: 435  LLSFQQALLSQLGQQQSTQEPGQTGGGTGPMNNLGLEMLSSMFGGLGAGSLAVPNRSNEP 494

Query: 1298 AEQLYANQLSQLQEMGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 1438
             EQLYA QLSQLQEMGFFDTQENIRAL  T+GNVHAAVERLLGN GQ
Sbjct: 495  PEQLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNSGQ 541